Stk11ip (serine/threonine kinase 11 interacting protein) - Rat Genome Database

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Gene: Stk11ip (serine/threonine kinase 11 interacting protein) Rattus norvegicus
Analyze
Symbol: Stk11ip
Name: serine/threonine kinase 11 interacting protein
RGD ID: 1305046
Description: Predicted to enable protein kinase binding activity. Predicted to be involved in protein localization. Predicted to be located in intracellular membrane-bounded organelle. Predicted to be active in cytoplasm. Orthologous to human STK11IP (serine/threonine kinase 11 interacting protein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC301535; MGC188315; serine/threonine-protein kinase 11-interacting protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8984,459,733 - 84,476,521 (+)NCBIGRCr8
mRatBN7.2977,012,297 - 77,027,989 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl977,012,693 - 77,027,873 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx985,456,898 - 85,472,116 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0990,585,773 - 90,600,991 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0988,971,951 - 88,987,175 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0982,718,343 - 82,733,894 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl982,718,709 - 82,734,393 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0982,487,604 - 82,503,882 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4974,799,450 - 74,814,635 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1974,949,013 - 74,974,027 (+)NCBI
Celera974,582,562 - 74,597,564 (+)NCBICelera
Cytogenetic Map9q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11741830   PMID:12477932   PMID:17897319   PMID:22871113  


Genomics

Comparative Map Data
Stk11ip
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8984,459,733 - 84,476,521 (+)NCBIGRCr8
mRatBN7.2977,012,297 - 77,027,989 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl977,012,693 - 77,027,873 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx985,456,898 - 85,472,116 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0990,585,773 - 90,600,991 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0988,971,951 - 88,987,175 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0982,718,343 - 82,733,894 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl982,718,709 - 82,734,393 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0982,487,604 - 82,503,882 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4974,799,450 - 74,814,635 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1974,949,013 - 74,974,027 (+)NCBI
Celera974,582,562 - 74,597,564 (+)NCBICelera
Cytogenetic Map9q33NCBI
STK11IP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382219,597,857 - 219,616,451 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2219,597,857 - 219,616,451 (+)EnsemblGRCh38hg38GRCh38
GRCh372220,462,579 - 220,481,173 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362220,170,840 - 220,189,417 (+)NCBINCBI36Build 36hg18NCBI36
Build 342220,288,100 - 220,306,678NCBI
Celera2214,232,566 - 214,251,145 (+)NCBICelera
Cytogenetic Map2q35NCBI
HuRef2212,315,421 - 212,334,108 (+)NCBIHuRef
CHM1_12220,468,434 - 220,486,998 (+)NCBICHM1_1
T2T-CHM13v2.02220,082,587 - 220,101,184 (+)NCBIT2T-CHM13v2.0
Stk11ip
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39175,498,173 - 75,513,979 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl175,498,173 - 75,513,979 (+)EnsemblGRCm39 Ensembl
GRCm38175,521,529 - 75,537,335 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl175,521,529 - 75,537,335 (+)EnsemblGRCm38mm10GRCm38
MGSCv37175,518,104 - 75,533,910 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36176,367,426 - 76,383,401 (+)NCBIMGSCv36mm8
MGSCv36175,404,694 - 75,420,483 (+)NCBIMGSCv36mm8
Celera176,012,473 - 76,038,291 (+)NCBICelera
Cytogenetic Map1C4NCBI
cM Map139.16NCBI
Stk11ip
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545313,870,730 - 13,885,353 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545313,870,780 - 13,885,603 (-)NCBIChiLan1.0ChiLan1.0
STK11IP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213122,223,657 - 122,246,495 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B122,239,498 - 122,261,463 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B106,854,466 - 106,873,588 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B225,444,586 - 225,463,613 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B225,445,703 - 225,463,355 (+)Ensemblpanpan1.1panPan2
STK11IP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13726,107,210 - 26,122,790 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3726,107,232 - 26,123,306 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3726,932,621 - 26,948,195 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03726,122,336 - 26,137,910 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3726,122,347 - 26,137,903 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13726,026,218 - 26,041,779 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03725,962,238 - 25,977,834 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03725,982,919 - 25,998,523 (+)NCBIUU_Cfam_GSD_1.0
Stk11ip
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303175,622,896 - 175,639,304 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365691,965,962 - 1,981,842 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365691,965,686 - 1,982,094 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STK11IP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15121,604,166 - 121,619,063 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115121,604,075 - 121,619,066 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
STK11IP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110105,494,492 - 105,517,153 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10105,493,621 - 105,517,206 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604093,884,784 - 93,907,068 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Stk11ip
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248235,463,965 - 5,479,078 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248235,464,571 - 5,479,346 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Stk11ip
33 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:124
Count of miRNA genes:107
Interacting mature miRNAs:115
Transcripts:ENSRNOT00000027256
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92207116986369743Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)92375414483851531Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)93253550577535505Rat
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)93253550577535505Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)93696235977814038Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)93696235992058970Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)93696235995410867Rat
6903941Pur31Proteinuria QTL 310.036urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)94019418885194188Rat
11353949Bp393Blood pressure QTL 393arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94019418885194188Rat
61352Bp34Blood pressure QTL 345arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94249534379271511Rat
10058949Gmadr5Adrenal mass QTL 520.014adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)94279151387976209Rat
11353951Bp394Blood pressure QTL 394arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94464992189649921Rat
12879506Pur33Proteinuria QTL 33urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)94464992189649921Rat
11353957Bmd92Bone mineral density QTL 920.01tibia mineral mass (VT:1000283)volumetric bone mineral density (CMO:0001553)94611419991114199Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94859825193598251Rat
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)95584784177026453Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)95662771378595166Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)95662771378595166Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)95662771378595166Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)956771635101771635Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)958163035100929646Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)961381434104821652Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)96207227596470995Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)96207227596470995Rat
61385Edpm9Estrogen-dependent pituitary mass QTL 93.430.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)963869687108869687Rat
731171Glom6Glomerulus QTL 62.80.0003kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)964573531109573531Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)975712843111552878Rat

Markers in Region
D9Bro1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2977,026,343 - 77,026,453 (+)MAPPERmRatBN7.2
Rnor_6.0982,732,357 - 82,732,466NCBIRnor6.0
Rnor_5.0982,501,618 - 82,501,727UniSTSRnor5.0
RGSC_v3.4974,813,098 - 74,813,207UniSTSRGSC3.4
RGSC_v3.4974,813,097 - 74,813,207RGDRGSC3.4
RGSC_v3.1974,973,168 - 74,973,277RGD
RH 3.4 Map9757.3RGD
RH 3.4 Map9757.3UniSTS
Cytogenetic Map9q33UniSTS
Cytogenetic Map9q34UniSTS
RH130949  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2977,027,635 - 77,027,820 (+)MAPPERmRatBN7.2
Rnor_6.0982,733,649 - 82,733,833NCBIRnor6.0
Rnor_5.0982,502,910 - 82,503,094UniSTSRnor5.0
RGSC_v3.4974,814,390 - 74,814,574UniSTSRGSC3.4
Celera974,597,319 - 74,597,503UniSTS
RH 3.4 Map9758.1UniSTS
Cytogenetic Map9q33UniSTS
MARC_23613-23614:1027526035:1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2977,026,299 - 77,027,156 (+)MAPPERmRatBN7.2
Rnor_6.0982,732,313 - 82,733,169NCBIRnor6.0
Rnor_5.0982,501,574 - 82,502,430UniSTSRnor5.0
RGSC_v3.4974,813,054 - 74,813,910UniSTSRGSC3.4
Cytogenetic Map9q33UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 22 9 4 2 4 66 21 32 3
Low 3 21 48 37 17 37 8 11 8 14 9 8 8
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001106922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006245188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039083376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC112361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC168233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000027256   ⟹   ENSRNOP00000027256
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl977,012,693 - 77,027,873 (+)Ensembl
Rnor_6.0 Ensembl982,718,709 - 82,733,886 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000080524   ⟹   ENSRNOP00000074996
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl977,012,693 - 77,027,873 (+)Ensembl
Rnor_6.0 Ensembl982,718,753 - 82,734,393 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000115992   ⟹   ENSRNOP00000092473
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl977,012,693 - 77,027,873 (+)Ensembl
RefSeq Acc Id: NM_001106922   ⟹   NP_001100392
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,461,336 - 84,476,521 (+)NCBI
mRatBN7.2977,012,693 - 77,027,881 (+)NCBI
Rnor_6.0982,718,709 - 82,733,894 (+)NCBI
Rnor_5.0982,487,604 - 82,503,882 (+)NCBI
RGSC_v3.4974,799,450 - 74,814,635 (+)RGD
Celera974,582,562 - 74,597,564 (+)RGD
Sequence:
RefSeq Acc Id: XM_006245188   ⟹   XP_006245250
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
mRatBN7.2977,012,310 - 77,027,989 (+)NCBI
Rnor_6.0982,718,343 - 82,733,894 (+)NCBI
Rnor_5.0982,487,604 - 82,503,882 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039083376   ⟹   XP_038939304
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
mRatBN7.2977,012,307 - 77,027,989 (+)NCBI
RefSeq Acc Id: XM_063266980   ⟹   XP_063123050
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
RefSeq Acc Id: XM_063266981   ⟹   XP_063123051
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
RefSeq Acc Id: XM_063266982   ⟹   XP_063123052
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
RefSeq Acc Id: XM_063266983   ⟹   XP_063123053
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
RefSeq Acc Id: XM_063266984   ⟹   XP_063123054
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
RefSeq Acc Id: XM_063266985   ⟹   XP_063123055
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
RefSeq Acc Id: XM_063266986   ⟹   XP_063123056
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
RefSeq Acc Id: XM_063266987   ⟹   XP_063123057
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
RefSeq Acc Id: XM_063266988   ⟹   XP_063123058
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
RefSeq Acc Id: XM_063266989   ⟹   XP_063123059
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
RefSeq Acc Id: XM_063266990   ⟹   XP_063123060
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
RefSeq Acc Id: XM_063266991   ⟹   XP_063123061
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
RefSeq Acc Id: XM_063266992   ⟹   XP_063123062
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
RefSeq Acc Id: XM_063266993   ⟹   XP_063123063
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,476,521 (+)NCBI
RefSeq Acc Id: XM_063266994   ⟹   XP_063123064
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,459,733 - 84,469,104 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001100392   ⟸   NM_001106922
- UniProtKB: B4F7D6 (UniProtKB/TrEMBL),   A0A8I6AVQ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006245250   ⟸   XM_006245188
- Peptide Label: isoform X13
- UniProtKB: A0A8I6AVQ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000074996   ⟸   ENSRNOT00000080524
RefSeq Acc Id: ENSRNOP00000027256   ⟸   ENSRNOT00000027256
RefSeq Acc Id: XP_038939304   ⟸   XM_039083376
- Peptide Label: isoform X7
- UniProtKB: A0A8I6AVQ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000092473   ⟸   ENSRNOT00000115992
RefSeq Acc Id: XP_063123063   ⟸   XM_063266993
- Peptide Label: isoform X16
RefSeq Acc Id: XP_063123050   ⟸   XM_063266980
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063123053   ⟸   XM_063266983
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063123052   ⟸   XM_063266982
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063123054   ⟸   XM_063266984
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063123051   ⟸   XM_063266981
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063123055   ⟸   XM_063266985
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063123056   ⟸   XM_063266986
- Peptide Label: isoform X8
- UniProtKB: F7F669 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063123057   ⟸   XM_063266987
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063123058   ⟸   XM_063266988
- Peptide Label: isoform X10
RefSeq Acc Id: XP_063123059   ⟸   XM_063266989
- Peptide Label: isoform X11
RefSeq Acc Id: XP_063123061   ⟸   XM_063266991
- Peptide Label: isoform X14
RefSeq Acc Id: XP_063123060   ⟸   XM_063266990
- Peptide Label: isoform X12
RefSeq Acc Id: XP_063123062   ⟸   XM_063266992
- Peptide Label: isoform X15
RefSeq Acc Id: XP_063123064   ⟸   XM_063266994
- Peptide Label: isoform X17
Protein Domains
LKB1 serine/threonine kinase interacting protein

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B4F7D6-F1-model_v2 AlphaFold B4F7D6 1-1072 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696785
Promoter ID:EPDNEW_R7309
Type:multiple initiation site
Name:Stk11ip_1
Description:serine/threonine kinase 11 interacting protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0982,718,726 - 82,718,786EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305046 AgrOrtholog
BioCyc Gene G2FUF-27058 BioCyc
Ensembl Genes ENSRNOG00000020107 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000027256 ENTREZGENE
  ENSRNOT00000027256.7 UniProtKB/TrEMBL
  ENSRNOT00000080524.2 UniProtKB/TrEMBL
  ENSRNOT00000115992.1 UniProtKB/TrEMBL
Gene3D-CATH 3.80.10.10 UniProtKB/TrEMBL
InterPro L_dom-like UniProtKB/TrEMBL
  Leu-rich_rpt UniProtKB/TrEMBL
  LIP1_N UniProtKB/TrEMBL
KEGG Report rno:301535 UniProtKB/TrEMBL
NCBI Gene 301535 ENTREZGENE
PANTHER NISCHARIN RELATED UniProtKB/TrEMBL
  SERINE/THREONINE-PROTEIN KINASE 11-INTERACTING PROTEIN UniProtKB/TrEMBL
Pfam LIP1 UniProtKB/TrEMBL
PhenoGen Stk11ip PhenoGen
PROSITE LRR UniProtKB/TrEMBL
RatGTEx ENSRNOG00000020107 RatGTEx
Superfamily-SCOP L domain-like UniProtKB/TrEMBL
  Outer arm dynein light chain 1 UniProtKB/TrEMBL
UniProt A0A0G2K9H2_RAT UniProtKB/TrEMBL
  A0A8I6AVQ2 ENTREZGENE, UniProtKB/TrEMBL
  B4F7D6 ENTREZGENE, UniProtKB/TrEMBL
  F7F669 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Stk11ip  serine/threonine kinase 11 interacting protein   Stk11ip_predicted  serine/threonine kinase 11 interacting protein (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Stk11ip_predicted  serine/threonine kinase 11 interacting protein (predicted)      Symbol and Name status set to approved 70820 APPROVED