Spats2 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 7 | 132,159,021 - 132,232,296 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 130,280,100 - 130,353,425 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 130,280,108 - 130,353,424 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 132,090,080 - 132,163,406 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 134,315,652 - 134,388,983 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 134,228,168 - 134,301,490 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 140,806,729 - 140,880,109 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 140,829,076 - 140,880,109 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | X | 115,310,573 - 115,384,244 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 137,922,705 - 137,972,033 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 137,999,277 - 138,048,470 (+) | NCBI | | | | | Celera | 7 | 126,787,529 - 126,837,008 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | q36 | NCBI | | | | |
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SPATS2 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 12 | 49,366,852 - 49,527,425 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 49,366,584 - 49,527,425 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 49,761,245 - 49,921,208 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 48,046,955 - 48,207,474 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 48,047,559 - 48,207,276 | NCBI | | | | | Celera | 12 | 48,553,967 - 48,715,667 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | q13.12 | NCBI | | | | | HuRef | 12 | 46,791,094 - 46,952,041 (+) | NCBI | | HuRef | | | CHM1_1 | 12 | 49,726,383 - 49,887,445 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 49,329,105 - 49,489,669 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Spats2 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 15 | 99,023,783 - 99,111,096 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 15 | 99,023,797 - 99,111,096 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 15 | 99,125,926 - 99,213,215 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 15 | 99,125,916 - 99,213,215 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 15 | 98,957,276 - 99,042,897 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 15 | 98,954,879 - 99,040,500 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 15 | 101,281,888 - 101,368,154 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | F1 | NCBI | | | | | cM Map | 15 | 56.01 | NCBI | | | | |
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Spats2 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955500 | 8,175,707 - 8,301,444 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955500 | 8,174,233 - 8,300,424 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SPATS2 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 10 | 44,657,199 - 44,818,263 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 44,653,963 - 44,814,548 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 39,223,718 - 39,384,254 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 40,113,088 - 40,270,585 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 40,113,218 - 40,180,096 (-) | Ensembl | panpan1.1 | | panPan2 | |
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SPATS2 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 27 | 5,111,925 - 5,182,861 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 27 | 5,112,382 - 5,179,466 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 27 | 41,008,192 - 41,147,003 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 27 | 5,160,652 - 5,299,860 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 27 | 5,160,665 - 5,299,988 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 27 | 5,126,505 - 5,265,299 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 27 | 5,116,075 - 5,254,938 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 27 | 41,401,519 - 41,540,727 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Spats2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404945 | 65,914,124 - 66,031,792 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936512 | 7,200,736 - 7,251,608 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936512 | 7,133,023 - 7,251,563 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SPATS2 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 5 | 15,347,633 - 15,484,935 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 15,347,622 - 15,484,939 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 15,859,931 - 15,897,930 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SPATS2 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 11 | 45,693,002 - 45,772,257 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 45,599,458 - 45,773,429 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 200,355,995 - 200,530,458 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Spats2 (Heterocephalus glaber - naked mole-rat) |
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