Gene: Trpa1 (transient receptor potential cation channel, subfamily A, member 1) Rattus norvegicus
Analyze
Symbol: Trpa1
Name: transient receptor potential cation channel, subfamily A, member 1
Description: ENCODES a protein that exhibits osmolarity-sensing cation channel activity; voltage-gated calcium channel activity; calcium channel activity (ortholog); INVOLVED IN calcium ion transmembrane import into cytosol; cellular response to caffeine; cellular response to carbon dioxide; ASSOCIATED WITH Abdominal Pain; Cold Hypersensitivity; Diabetic Neuropathies; FOUND IN apical plasma membrane; axon; integral component of plasma membrane (ortholog); INTERACTS WITH 4-hydroxynon-2-enal; aconitine; acrolein
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ANKTM1; ankyrin-like with transmembrane domains protein 1; transient receptor potential cation channel subfamily A member 1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.053,783,247 - 3,836,485 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.053,764,339 - 3,818,781 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.453,531,163 - 3,584,401 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.153,531,162 - 3,584,401 (+)NCBI
Celera53,971,809 - 4,024,939 (+)NCBICelera
Cytogenetic Map5q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Trpa1
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303284
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2018-01-02
Status: ACTIVE