Imported Disease Annotations - OMIMTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Bleeding Disorder, Vascular-Type | | ISO | APOLD1 (Homo sapiens) | 7240710 | | OMIM | | |
|
Imported Disease Annotations - OMIMTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Bleeding Disorder, Vascular-Type | | ISO | APOLD1 (Homo sapiens) | 7240710 | | OMIM | | |
|
|
|
|
|
# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Verge: a novel vascular early response gene. | Regard JB, etal., J Neurosci 2004 Apr 21;24(16):4092-103. |
3. | GOA pipeline | RGD automated data pipeline |
4. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
Apold1 (Rattus norvegicus - Norway rat) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
APOLD1 (Homo sapiens - human) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Apold1 (Mus musculus - house mouse) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Apold1 (Chinchilla lanigera - long-tailed chinchilla) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
APOLD1 (Pan paniscus - bonobo/pygmy chimpanzee) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
APOLD1 (Canis lupus familiaris - dog) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Apold1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
APOLD1 (Sus scrofa - pig) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
APOLD1 (Chlorocebus sabaeus - green monkey) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Apold1 (Heterocephalus glaber - naked mole-rat) |
|
.
Variants in Apold1
113 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 21 | 2 | 2 | 2 | 14 | 14 | 8 | ||||||
Low | 3 | 22 | 55 | 39 | 19 | 39 | 8 | 11 | 60 | 21 | 29 | 11 | 8 |
Below cutoff | 4 |
RefSeq Transcripts | NM_001003403 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_039108001 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039108003 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039108004 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039108005 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039108006 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063286434 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063286435 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_005503268 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_005503269 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_005503270 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_005503271 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_005503274 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_010065682 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_010065683 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC136063 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AY673969 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH473964 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000004 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSRNOT00000010289 ⟹ ENSRNOP00000010289 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | ENSRNOT00000102557 ⟹ ENSRNOP00000079429 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | NM_001003403 ⟹ NP_001003403 | ||||||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
|
||||||||||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | XM_039108001 ⟹ XP_038963929 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | XM_039108003 ⟹ XP_038963931 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | XM_039108004 ⟹ XP_038963932 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | XM_039108005 ⟹ XP_038963933 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | XM_039108006 ⟹ XP_038963934 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | XM_063286434 ⟹ XP_063142504 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_063286435 ⟹ XP_063142505 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XR_005503268 | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | XR_005503269 | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | XR_005503270 | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | XR_005503271 | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | XR_005503274 | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | XR_010065682 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XR_010065683 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
|
Protein RefSeqs | NP_001003403 | (Get FASTA) | NCBI Sequence Viewer |
XP_038963929 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038963931 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038963932 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038963933 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038963934 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063142504 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063142505 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAT78358 | (Get FASTA) | NCBI Sequence Viewer |
EDM01640 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000010289 | ||
ENSRNOP00000010289.4 | |||
ENSRNOP00000079429 | |||
ENSRNOP00000079429.1 | |||
ENSRNOP00055035122 | |||
ENSRNOP00060022272 | |||
ENSRNOP00065014975 | |||
GenBank Protein | Q6B959 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_001003403 ⟸ NM_001003403 |
- UniProtKB: | Q6B959 (UniProtKB/Swiss-Prot), A6IME9 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000010289 ⟸ ENSRNOT00000010289 |
RefSeq Acc Id: | XP_038963929 ⟸ XM_039108001 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8I6G5B0 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038963931 ⟸ XM_039108003 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8I6G5B0 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038963932 ⟸ XM_039108004 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8I6G5B0 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038963933 ⟸ XM_039108005 |
- Peptide Label: | isoform X3 |
- UniProtKB: | Q6B959 (UniProtKB/Swiss-Prot), A6IME9 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038963934 ⟸ XM_039108006 |
- Peptide Label: | isoform X3 |
- UniProtKB: | Q6B959 (UniProtKB/Swiss-Prot), A6IME9 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSRNOP00000079429 ⟸ ENSRNOT00000102557 |
RefSeq Acc Id: | XP_063142505 ⟸ XM_063286435 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_063142504 ⟸ XM_063286434 |
- Peptide Label: | isoform X1 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q6B959-F1-model_v2 | AlphaFold | Q6B959 | 1-246 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
Database | Acc Id | Source(s) |
AGR Gene | RGD:1303123 | AgrOrtholog |
BioCyc Gene | G2FUF-42642 | BioCyc |
Ensembl Genes | ENSRNOG00000007830 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
ENSRNOG00055024971 | UniProtKB/Swiss-Prot | |
ENSRNOG00060016190 | UniProtKB/Swiss-Prot | |
ENSRNOG00065012017 | UniProtKB/Swiss-Prot | |
Ensembl Transcript | ENSRNOT00000010289 | ENTREZGENE |
ENSRNOT00000010289.5 | UniProtKB/Swiss-Prot | |
ENSRNOT00000102557.1 | UniProtKB/TrEMBL | |
ENSRNOT00055043034 | UniProtKB/Swiss-Prot | |
ENSRNOT00060027716 | UniProtKB/Swiss-Prot | |
ENSRNOT00065019539 | UniProtKB/Swiss-Prot | |
InterPro | ApoL | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
KEGG Report | rno:444983 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
NCBI Gene | 444983 | ENTREZGENE |
PANTHER | APOLIPOPROTEIN L DOMAIN-CONTAINING PROTEIN 1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTHR14096 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | ApoL | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PhenoGen | Apold1 | PhenoGen |
RatGTEx | ENSRNOG00000007830 | RatGTEx |
ENSRNOG00055024971 | RatGTEx | |
ENSRNOG00060016190 | RatGTEx | |
ENSRNOG00065012017 | RatGTEx | |
UniProt | A0A8I6G5B0 | ENTREZGENE, UniProtKB/TrEMBL |
A6IME9 | ENTREZGENE, UniProtKB/TrEMBL | |
APLD1_RAT | UniProtKB/Swiss-Prot, ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2008-05-15 | Apold1 | apolipoprotein L domain containing 1 | Verge | vascular early response gene protein | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2005-02-14 | Verge | vascular early response gene protein | Symbol and Name status set to provisional | 70820 | PROVISIONAL |