Ptk2 (protein tyrosine kinase 2) - Rat Genome Database

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Pathways
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Gene: Ptk2 (protein tyrosine kinase 2) Ictidomys tridecemlineatus
Analyze
Symbol: Ptk2
Name: protein tyrosine kinase 2
RGD ID: 12710002
Description: ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN angiogenesis (ortholog); axonogenesis (ortholog); blood vessel development (ortholog); PARTICIPATES IN integrin mediated signaling pathway; long term potentiation; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); ciliary basal body (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: focal adhesion kinase 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244053032,953,767 - 3,152,431 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647010,379,872 - 10,578,543 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647010,379,855 - 10,578,531 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
angiogenesis  (IEA,ISO)
axonogenesis  (ISO)
blood vessel development  (ISO)
cell migration  (ISO)
cellular response to morphine  (ISO)
cellular response to transforming growth factor beta stimulus  (ISO)
central nervous system neuron axonogenesis  (ISO)
endothelial cell migration  (ISO)
ephrin receptor signaling pathway  (ISO)
extracellular matrix organization  (ISO)
fat cell differentiation  (ISO)
growth hormone receptor signaling pathway  (ISO)
integrin-mediated signaling pathway  (ISO)
intracellular chloride ion homeostasis  (ISO)
JNK cascade  (ISO)
MAPK cascade  (ISO)
microtubule cytoskeleton organization  (ISO)
negative regulation of anoikis  (ISO)
negative regulation of apoptotic process  (ISO)
negative regulation of autophagy  (ISO)
negative regulation of axonogenesis  (ISO)
negative regulation of cell migration  (ISO)
negative regulation of cell-cell adhesion  (ISO)
negative regulation of organ growth  (ISO)
negative regulation of synapse assembly  (ISO)
neuron migration  (ISO)
nuclear migration  (ISO)
organ growth  (ISO)
positive regulation of cardiac muscle hypertrophy  (ISO)
positive regulation of cell adhesion  (ISO)
positive regulation of cell growth  (ISO)
positive regulation of cell migration  (ISO)
positive regulation of cell population proliferation  (IEA)
positive regulation of epithelial cell migration  (ISO)
positive regulation of epithelial to mesenchymal transition  (ISO)
positive regulation of fibroblast migration  (ISO)
positive regulation of glial cell proliferation  (ISO)
positive regulation of macrophage chemotaxis  (ISO)
positive regulation of macrophage proliferation  (ISO)
positive regulation of phagocytosis  (ISO)
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction  (ISO)
positive regulation of protein phosphorylation  (ISO)
positive regulation of smooth muscle cell migration  (ISO)
positive regulation of smooth muscle cell proliferation  (ISO)
positive regulation of synaptic transmission  (ISO)
positive regulation of ubiquitin-dependent protein catabolic process  (ISO)
positive regulation of wound healing  (ISO)
regulation of biological quality  (IEA)
regulation of cell adhesion mediated by integrin  (ISO)
regulation of cell population proliferation  (ISO)
regulation of cell shape  (ISO)
regulation of cellular component organization  (IEA)
regulation of epithelial cell migration  (ISO)
regulation of focal adhesion assembly  (ISO)
regulation of modification of postsynaptic actin cytoskeleton  (ISO)
regulation of multicellular organismal process  (IEA)
regulation of osteoblast differentiation  (ISO)
regulation of protein phosphorylation  (ISO)
regulation of substrate adhesion-dependent cell spreading  (ISO)
response to arsenic-containing substance  (ISO)
response to estradiol  (ISO)
response to glucose  (ISO)
response to mechanical stimulus  (ISO)
response to organic cyclic compound  (ISO)
response to organic substance  (ISO)
response to organonitrogen compound  (ISO)
response to xenobiotic stimulus  (ISO)
signal complex assembly  (IEA)
transforming growth factor beta receptor signaling pathway  (ISO)
vasculogenesis  (ISO)
vasodilation  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Ptk2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244053032,953,767 - 3,152,431 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647010,379,872 - 10,578,543 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647010,379,855 - 10,578,531 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PTK2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388140,657,900 - 141,002,079 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8140,657,900 - 141,002,216 (-)EnsemblGRCh38hg38GRCh38
GRCh378141,667,999 - 142,012,178 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368141,737,683 - 142,080,514 (-)NCBINCBI36Build 36hg18NCBI36
Build 348141,737,682 - 142,080,514NCBI
Celera8137,836,859 - 138,179,410 (-)NCBICelera
Cytogenetic Map8q24.3NCBI
HuRef8136,979,065 - 137,322,195 (-)NCBIHuRef
CHM1_18141,708,729 - 142,051,666 (-)NCBICHM1_1
T2T-CHM13v2.08141,777,902 - 142,122,150 (-)NCBIT2T-CHM13v2.0
Ptk2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391573,076,951 - 73,297,192 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1573,076,951 - 73,295,129 (-)EnsemblGRCm39 Ensembl
GRCm381573,205,102 - 73,423,820 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1573,205,102 - 73,423,280 (-)EnsemblGRCm38mm10GRCm38
MGSCv371573,035,535 - 73,253,621 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361573,032,362 - 73,221,980 (-)NCBIMGSCv36mm8
Celera1574,705,367 - 74,923,905 (-)NCBICelera
Cytogenetic Map15D3NCBI
cM Map1533.94NCBI
Ptk2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87107,015,730 - 107,220,865 (-)NCBIGRCr8
mRatBN7.27105,126,725 - 105,331,848 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7105,126,728 - 105,331,783 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7106,875,344 - 107,035,378 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07109,096,927 - 109,256,959 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07109,044,956 - 109,204,985 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07114,436,419 - 114,611,317 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7114,437,361 - 114,590,119 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07114,371,979 - 114,525,553 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47110,933,298 - 111,084,554 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17110,967,527 - 111,118,784 (-)NCBI
Celera7101,534,957 - 101,690,471 (-)NCBICelera
RH 3.4 Map7725.6RGD
Cytogenetic Map7q34NCBI
Ptk2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546114,337,914 - 14,556,931 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546114,337,914 - 14,622,779 (-)NCBIChiLan1.0ChiLan1.0
PTK2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27158,052,611 - 158,397,828 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18133,583,257 - 133,928,558 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08137,330,777 - 137,677,306 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18140,412,773 - 140,743,129 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8140,412,773 - 140,684,898 (-)Ensemblpanpan1.1panPan2
PTK2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11335,302,439 - 35,541,336 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1335,303,380 - 35,541,294 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1335,161,620 - 35,427,478 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01335,687,298 - 35,953,785 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1335,687,298 - 35,953,782 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11335,407,367 - 35,673,847 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01335,497,341 - 35,763,586 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01335,917,116 - 36,183,296 (-)NCBIUU_Cfam_GSD_1.0
PTK2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl42,656,614 - 2,896,054 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.142,656,606 - 2,896,060 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
PTK2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18134,897,511 - 135,246,300 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660394,888,238 - 5,242,010 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ptk2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473515,461,178 - 15,714,071 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473515,356,911 - 15,713,219 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021723888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021723892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021723898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021723900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021723902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021723906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021723914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021723922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021723925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021723926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021723929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040293589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040293590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040293591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040293592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040293593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040293594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040293595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040293596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040293597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040293598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040293599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040293600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040293601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSSTOT00000013132   ⟹   ENSSTOP00000011771
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493647010,426,318 - 10,577,372 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000032164   ⟹   ENSSTOP00000027285
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493647010,426,318 - 10,565,879 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000034965   ⟹   ENSSTOP00000029628
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493647010,405,064 - 10,578,543 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000036182   ⟹   ENSSTOP00000027644
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493647010,426,294 - 10,578,521 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000040120   ⟹   ENSSTOP00000026545
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493647010,379,872 - 10,578,543 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000041068   ⟹   ENSSTOP00000031272
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493647010,405,064 - 10,578,543 (+)Ensembl
RefSeq Acc Id: XM_021723888   ⟹   XP_021579563
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,058 - 3,152,431 (+)NCBI
SpeTri2.0NW_00493647010,405,127 - 10,578,531 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021723892   ⟹   XP_021579567
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,058 - 3,152,431 (+)NCBI
SpeTri2.0NW_00493647010,405,435 - 10,578,531 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021723898   ⟹   XP_021579573
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,058 - 3,152,431 (+)NCBI
SpeTri2.0NW_00493647010,405,127 - 10,578,531 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021723900   ⟹   XP_021579575
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,058 - 3,152,431 (+)NCBI
SpeTri2.0NW_00493647010,405,127 - 10,578,531 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021723902   ⟹   XP_021579577
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,059 - 3,152,431 (+)NCBI
SpeTri2.0NW_00493647010,405,127 - 10,578,531 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021723906   ⟹   XP_021579581
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,059 - 3,152,431 (+)NCBI
SpeTri2.0NW_00493647010,405,127 - 10,578,531 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021723914   ⟹   XP_021579589
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,059 - 3,152,431 (+)NCBI
SpeTri2.0NW_00493647010,405,127 - 10,578,531 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021723922   ⟹   XP_021579597
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,058 - 3,152,431 (+)NCBI
SpeTri2.0NW_00493647010,405,127 - 10,578,531 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021723925   ⟹   XP_021579600
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,059 - 3,152,431 (+)NCBI
SpeTri2.0NW_00493647010,405,127 - 10,578,531 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021723926   ⟹   XP_021579601
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,953,767 - 3,152,431 (+)NCBI
SpeTri2.0NW_00493647010,379,855 - 10,578,531 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021723929   ⟹   XP_021579604
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,058 - 3,152,431 (+)NCBI
SpeTri2.0NW_00493647010,405,127 - 10,577,638 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040293589   ⟹   XP_040149523
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,057 - 3,152,431 (+)NCBI
RefSeq Acc Id: XM_040293590   ⟹   XP_040149524
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,057 - 3,152,431 (+)NCBI
RefSeq Acc Id: XM_040293591   ⟹   XP_040149525
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,058 - 3,152,431 (+)NCBI
RefSeq Acc Id: XM_040293592   ⟹   XP_040149526
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,057 - 3,152,431 (+)NCBI
RefSeq Acc Id: XM_040293593   ⟹   XP_040149527
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,058 - 3,152,431 (+)NCBI
RefSeq Acc Id: XM_040293594   ⟹   XP_040149528
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,058 - 3,152,431 (+)NCBI
RefSeq Acc Id: XM_040293595   ⟹   XP_040149529
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,057 - 3,152,431 (+)NCBI
RefSeq Acc Id: XM_040293596   ⟹   XP_040149530
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,057 - 3,152,431 (+)NCBI
RefSeq Acc Id: XM_040293597   ⟹   XP_040149531
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,058 - 3,152,431 (+)NCBI
RefSeq Acc Id: XM_040293598   ⟹   XP_040149532
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053032,979,057 - 3,152,431 (+)NCBI
RefSeq Acc Id: XM_040293599   ⟹   XP_040149533
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053033,097,949 - 3,152,431 (+)NCBI
RefSeq Acc Id: XM_040293600   ⟹   XP_040149534
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053033,114,416 - 3,152,431 (+)NCBI
RefSeq Acc Id: XM_040293601   ⟹   XP_040149535
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053033,105,994 - 3,152,431 (+)NCBI
Protein Sequences
Protein RefSeqs XP_021579563 (Get FASTA)   NCBI Sequence Viewer  
  XP_021579567 (Get FASTA)   NCBI Sequence Viewer  
  XP_021579573 (Get FASTA)   NCBI Sequence Viewer  
  XP_021579575 (Get FASTA)   NCBI Sequence Viewer  
  XP_021579577 (Get FASTA)   NCBI Sequence Viewer  
  XP_021579581 (Get FASTA)   NCBI Sequence Viewer  
  XP_021579589 (Get FASTA)   NCBI Sequence Viewer  
  XP_021579597 (Get FASTA)   NCBI Sequence Viewer  
  XP_021579600 (Get FASTA)   NCBI Sequence Viewer  
  XP_021579601 (Get FASTA)   NCBI Sequence Viewer  
  XP_021579604 (Get FASTA)   NCBI Sequence Viewer  
  XP_040149523 (Get FASTA)   NCBI Sequence Viewer  
  XP_040149524 (Get FASTA)   NCBI Sequence Viewer  
  XP_040149525 (Get FASTA)   NCBI Sequence Viewer  
  XP_040149526 (Get FASTA)   NCBI Sequence Viewer  
  XP_040149527 (Get FASTA)   NCBI Sequence Viewer  
  XP_040149528 (Get FASTA)   NCBI Sequence Viewer  
  XP_040149529 (Get FASTA)   NCBI Sequence Viewer  
  XP_040149530 (Get FASTA)   NCBI Sequence Viewer  
  XP_040149531 (Get FASTA)   NCBI Sequence Viewer  
  XP_040149532 (Get FASTA)   NCBI Sequence Viewer  
  XP_040149533 (Get FASTA)   NCBI Sequence Viewer  
  XP_040149534 (Get FASTA)   NCBI Sequence Viewer  
  XP_040149535 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000011771.3
  ENSSTOP00000026545.1
  ENSSTOP00000027285.1
  ENSSTOP00000027644.1
  ENSSTOP00000029628.1
  ENSSTOP00000031272.1
Reference Protein Sequences
RefSeq Acc Id: XP_021579601   ⟸   XM_021723926
- Peptide Label: isoform X14
- UniProtKB: A0A287CYY1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021579563   ⟸   XM_021723888
- Peptide Label: isoform X1
- UniProtKB: A0A287CYY1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021579573   ⟸   XM_021723898
- Peptide Label: isoform X3
- UniProtKB: A0A287CYY1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021579575   ⟸   XM_021723900
- Peptide Label: isoform X4
- UniProtKB: A0A287D7W7 (UniProtKB/TrEMBL),   A0A287CYY1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021579577   ⟸   XM_021723902
- Peptide Label: isoform X7
- UniProtKB: A0A287D281 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021579589   ⟸   XM_021723914
- Peptide Label: isoform X11
- UniProtKB: A0A287D281 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021579597   ⟸   XM_021723922
- Peptide Label: isoform X12
- UniProtKB: A0A287D281 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021579581   ⟸   XM_021723906
- Peptide Label: isoform X10
- UniProtKB: A0A287D281 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021579600   ⟸   XM_021723925
- Peptide Label: isoform X13
- UniProtKB: A0A287D281 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021579604   ⟸   XM_021723929
- Peptide Label: isoform X15
- UniProtKB: A0A287D281 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021579567   ⟸   XM_021723892
- Peptide Label: isoform X2
- UniProtKB: A0A287DCH5 (UniProtKB/TrEMBL),   A0A287CYY1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040149529   ⟸   XM_040293595
- Peptide Label: isoform X18
- UniProtKB: A0A287CYY1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040149523   ⟸   XM_040293589
- Peptide Label: isoform X5
- UniProtKB: A0A287CYY1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040149524   ⟸   XM_040293590
- Peptide Label: isoform X6
- UniProtKB: A0A287CYY1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040149526   ⟸   XM_040293592
- Peptide Label: isoform X9
- UniProtKB: A0A287CYY1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040149530   ⟸   XM_040293596
- Peptide Label: isoform X19
- UniProtKB: A0A287D281 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040149532   ⟸   XM_040293598
- Peptide Label: isoform X21
- UniProtKB: A0A287D281 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040149525   ⟸   XM_040293591
- Peptide Label: isoform X8
- UniProtKB: A0A287D281 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040149527   ⟸   XM_040293593
- Peptide Label: isoform X16
- UniProtKB: A0A287D281 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040149528   ⟸   XM_040293594
- Peptide Label: isoform X17
- UniProtKB: A0A287D281 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040149531   ⟸   XM_040293597
- Peptide Label: isoform X20
- UniProtKB: A0A287D281 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040149533   ⟸   XM_040293599
- Peptide Label: isoform X22
RefSeq Acc Id: XP_040149535   ⟸   XM_040293601
- Peptide Label: isoform X22
RefSeq Acc Id: XP_040149534   ⟸   XM_040293600
- Peptide Label: isoform X22
RefSeq Acc Id: ENSSTOP00000027644   ⟸   ENSSTOT00000036182
RefSeq Acc Id: ENSSTOP00000026545   ⟸   ENSSTOT00000040120
RefSeq Acc Id: ENSSTOP00000029628   ⟸   ENSSTOT00000034965
RefSeq Acc Id: ENSSTOP00000011771   ⟸   ENSSTOT00000013132
RefSeq Acc Id: ENSSTOP00000031272   ⟸   ENSSTOT00000041068
RefSeq Acc Id: ENSSTOP00000027285   ⟸   ENSSTOT00000032164
Protein Domains
FERM   Protein kinase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000013107 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000013132.3 UniProtKB/TrEMBL
  ENSSTOT00000032164.1 UniProtKB/TrEMBL
  ENSSTOT00000034965.1 UniProtKB/TrEMBL
  ENSSTOT00000036182.1 UniProtKB/TrEMBL
  ENSSTOT00000040120.1 UniProtKB/TrEMBL
  ENSSTOT00000041068.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.80.10 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
  Nucleotidyltransferases domain 2 UniProtKB/TrEMBL
  Single helix bin UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Band_41_domain UniProtKB/TrEMBL
  FADK_N UniProtKB/TrEMBL
  FAK1-like_FERM_C UniProtKB/TrEMBL
  FAK1/PYK2_FERM_C UniProtKB/TrEMBL
  FERM/acyl-CoA-bd_prot_sf UniProtKB/TrEMBL
  FERM_2 UniProtKB/TrEMBL
  FERM_central UniProtKB/TrEMBL
  FERM_domain UniProtKB/TrEMBL
  Focal_adhe_kin_target_dom_sf UniProtKB/TrEMBL
  Focal_adhesion_kin_target_dom UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/TrEMBL
  Tyr_kinase_AS UniProtKB/TrEMBL
  Tyr_kinase_cat_dom UniProtKB/TrEMBL
  Ubiquitin-like_domsf UniProtKB/TrEMBL
NCBI Gene Ptk2 ENTREZGENE
PANTHER FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER UniProtKB/TrEMBL
  NON-SPECIFIC PROTEIN-TYROSINE KINASE UniProtKB/TrEMBL
Pfam FERM_C_FAK1 UniProtKB/TrEMBL
  FERM_M UniProtKB/TrEMBL
  FERM_N_2 UniProtKB/TrEMBL
  Focal_AT UniProtKB/TrEMBL
  PK_Tyr_Ser-Thr UniProtKB/TrEMBL
PRINTS TYRKINASE UniProtKB/TrEMBL
PROSITE FERM_3 UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_TYR UniProtKB/TrEMBL
SMART B41 UniProtKB/TrEMBL
  TyrKc UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SSF47031 UniProtKB/TrEMBL
  SSF54236 UniProtKB/TrEMBL
  SSF56112 UniProtKB/TrEMBL
  SSF68993 UniProtKB/TrEMBL
UniProt A0A287CYY1 ENTREZGENE, UniProtKB/TrEMBL
  A0A287D1B4_ICTTR UniProtKB/TrEMBL
  A0A287D281 ENTREZGENE, UniProtKB/TrEMBL
  A0A287D7W7 ENTREZGENE, UniProtKB/TrEMBL
  A0A287DCH5 ENTREZGENE, UniProtKB/TrEMBL
  I3MKF9_ICTTR UniProtKB/TrEMBL