Aadat (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404943 | 21,612,298 - 21,637,776 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936516 | 2,029,715 - 2,052,041 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936516 | 2,030,032 - 2,052,025 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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AADAT (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 4 | 170,060,222 - 170,094,292 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 170,060,222 - 170,091,699 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 170,981,373 - 171,011,538 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 171,217,948 - 171,247,947 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 4 | 168,313,662 - 168,343,661 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q33 | NCBI | | | | | HuRef | 4 | 166,736,223 - 166,766,217 (-) | NCBI | | HuRef | | | CHM1_1 | 4 | 170,957,912 - 170,987,911 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 173,420,406 - 173,454,472 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Aadat (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 8 | 60,958,877 - 60,998,711 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 60,958,966 - 60,998,711 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 60,505,843 - 60,545,677 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 60,505,932 - 60,545,677 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 62,984,921 - 63,024,474 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 63,398,266 - 63,437,819 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 63,093,543 - 63,132,626 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | B3.1 | NCBI | | | | | cM Map | 8 | 30.85 | NCBI | | | | |
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Aadat (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 16 | 34,520,236 - 34,566,388 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 16 | 29,509,392 - 29,544,332 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 16 | 29,509,394 - 29,544,332 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 16 | 33,104,268 - 33,139,214 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 16 | 36,538,015 - 36,572,956 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 16 | 32,738,925 - 32,773,893 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 16 | 32,832,001 - 32,868,680 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 16 | 32,832,061 - 32,868,702 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 16 | 32,665,727 - 32,705,543 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 16 | 32,845,006 - 32,885,600 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 16 | 32,845,082 - 32,885,675 (-) | NCBI | | | | | Celera | 16 | 29,503,305 - 29,538,406 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | p12 | NCBI | | | | |
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AADAT (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 3 | 167,840,395 - 167,870,662 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 168,196,263 - 168,228,815 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 162,283,569 - 162,313,720 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 174,353,766 - 174,383,471 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 174,353,766 - 174,383,471 (-) | Ensembl | panpan1.1 | | panPan2 | |
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AADAT (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 25 | 20,920,118 - 20,944,251 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 25 | 20,920,139 - 20,945,387 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 25 | 21,552,316 - 21,578,183 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 25 | 21,095,996 - 21,122,120 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 25 | 21,095,909 - 21,122,348 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 25 | 20,979,787 - 21,005,336 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 25 | 20,916,219 - 20,941,386 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 25 | 21,013,862 - 21,039,554 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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AADAT (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 14 | 19,768,776 - 19,792,256 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 19,768,816 - 19,792,254 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 21,067,885 - 21,091,280 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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AADAT (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 7 | 116,268,241 - 116,299,509 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 7 | 116,268,253 - 116,298,336 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 96,208,477 - 96,238,271 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Aadat (Heterocephalus glaber - naked mole-rat) |
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