Plcd4 (phospholipase C delta 4) - Rat Genome Database

Name: Plcd4
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Plcd4 (phospholipase C delta 4) Ictidomys tridecemlineatus

Analyze

Symbol:

Plcd4

Name:

phospholipase C delta 4

RGD ID:

12657596

Description:

ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol phospholipase C activity (ortholog); INVOLVED IN acrosome reaction (ortholog); small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH alacrima, achalasia, and impaired intellectual development syndrome (ortholog); cerebrotendinous xanthomatosis (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); endoplasmic reticulum (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4; phospholipase C delta 4, transcript variant X1; phospholipase C delta 4, transcript variant X10; phospholipase C delta 4, transcript variant X11; phospholipase C delta 4, transcript variant X12; phospholipase C delta 4, transcript variant X2; phospholipase C delta 4, transcript variant X3; phospholipase C delta 4, transcript variant X4; phospholipase C delta 4, transcript variant X5; phospholipase C delta 4, transcript variant X6; phospholipase C delta 4, transcript variant X7; phospholipase C delta 4, transcript variant X8; phospholipase C delta 4, transcript variant X9

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	174,714,969 - 174,756,001 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936569	1,058,611 - 1,099,577 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936569	1,058,092 - 1,097,662 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

alacrima, achalasia, and impaired intellectual development syndrome (ISO)

cerebrotendinous xanthomatosis (ISO)

genetic disease (ISO)

myofibrillar myopathy 1 (ISO)

Neurodevelopmental Disorders (ISO)

paroxysmal nonkinesigenic dyskinesia 1 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

acrosome reaction (IEA,ISO)

intracellular signal transduction (IEA)

lipid catabolic process (IEA)

lipid metabolic process (IEA)

phosphatidylinositol-mediated signaling (IEA)

release of sequestered calcium ion into cytosol (IEA)

signal transduction (IEA)

small GTPase-mediated signal transduction (ISO)

Cellular Component

cytoplasm (IEA)

cytosol (IEA)

endoplasmic reticulum (IEA)

nucleus (IEA)

plasma membrane (IEA)

Molecular Function

calcium ion binding (IEA)

G-protein alpha-subunit binding (ISO)

guanyl-nucleotide exchange factor activity (ISO)

hydrolase activity (IEA)

metal ion binding (IEA)

phosphatidylinositol phospholipase C activity (IEA,ISO)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Plcd4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	174,714,969 - 174,756,001 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936569	1,058,611 - 1,099,577 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936569	1,058,092 - 1,097,662 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PLCD4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	218,607,899 - 218,637,175 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	218,607,855 - 218,637,184 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	219,472,622 - 219,501,898 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	219,180,876 - 219,210,148 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	219,298,136 - 219,327,409	NCBI
Celera	2	213,240,381 - 213,269,662 (+)	NCBI		Celera
Cytogenetic Map	2	q35	NCBI
HuRef	2	211,325,808 - 211,355,366 (+)	NCBI		HuRef
CHM1_1	2	219,479,454 - 219,508,883 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	219,094,436 - 219,123,729 (+)	NCBI		T2T-CHM13v2.0

Plcd4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	74,581,175 - 74,605,137 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	74,582,047 - 74,606,953 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	74,541,975 - 74,565,977 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	74,542,888 - 74,567,794 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	74,589,463 - 74,612,551 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	74,477,739 - 74,499,184 (+)	NCBI		MGSCv36	mm8
Celera	1	75,100,417 - 75,123,669 (+)	NCBI		Celera
Cytogenetic Map	1	C4	NCBI
cM Map	1	38.54	NCBI

Plcd4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	83,564,616 - 83,613,742 (+)	NCBI		GRCr8
mRatBN7.2	9	76,115,523 - 76,158,602 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	76,117,168 - 76,142,453 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	84,562,298 - 84,587,522 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	89,691,247 - 89,716,473 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	88,077,430 - 88,102,653 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	81,816,395 - 81,844,364 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	81,816,872 - 81,844,364 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	81,579,905 - 81,608,512 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	73,878,506 - 73,905,127 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	74,025,487 - 74,052,109 (+)	NCBI
Celera	9	73,690,442 - 73,715,587 (+)	NCBI		Celera
Cytogenetic Map	9	q33	NCBI

Plcd4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955453	14,787,677 - 14,806,485 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955453	14,775,119 - 14,812,872 (-)	NCBI	ChiLan1.0	ChiLan1.0

PLCD4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	121,228,648 - 121,267,960 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	121,243,168 - 121,282,926 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	105,864,706 - 105,895,114 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	224,461,261 - 224,490,345 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	224,461,261 - 224,490,345 (+)	Ensembl	panpan1.1		panPan2

PLCD4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	25,221,329 - 25,244,492 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	25,226,244 - 25,244,914 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	26,041,363 - 26,064,404 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	25,237,345 - 25,260,497 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	25,237,771 - 25,260,768 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	25,142,268 - 25,165,298 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	25,076,485 - 25,099,551 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	25,096,641 - 25,120,171 (+)	NCBI		UU_Cfam_GSD_1.0

PLCD4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	120,626,938 - 120,688,112 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	120,660,549 - 120,695,731 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	133,641,398 - 133,676,142 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PLCD4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	104,512,156 - 104,540,555 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	104,512,678 - 104,542,531 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	94,863,854 - 94,893,228 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Plcd4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624823	6,418,922 - 6,442,418 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624823	6,418,359 - 6,446,848 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013360867	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021729935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021729936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021729937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021729938	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021729939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021729940	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021729941	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021729942	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021729943	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021729944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021729945	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267819	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267820	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267821	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267823	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267824	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267825	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267826	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267827	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267829	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267830	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267831	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267832	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267835	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267836	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267837	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040267838	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002484569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005725861	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005725862	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000006419 ⟹ ENSSTOP00000005738

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936569	1,058,611 - 1,099,577 (+)	Ensembl

RefSeq Acc Id:

ENSSTOT00000031401 ⟹ ENSSTOP00000024224

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936569	1,059,478 - 1,088,004 (+)	Ensembl

RefSeq Acc Id:

ENSSTOT00000036031 ⟹ ENSSTOP00000031084

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936569	1,059,478 - 1,099,577 (+)	Ensembl

RefSeq Acc Id:

XM_013360867 ⟹ XP_013216321

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,715,521 - 174,742,104 (+)	NCBI
SpeTri2.0	NW_004936569	1,058,095 - 1,084,885 (+)	NCBI

Sequence:

show sequence

TAAAAAACAGCAGCCAGGCTTTTCCTCTCTGGAGATGGTTGTCAAATCCATCTCAATCCTTTTC
TCTCACCCCACCCCCACCTCGAGTAACTGGTGTCCTGGGCCTTTAAGAGTTGAATGGGCTGGAC
TGAGAAAAGTGCTCCCACCTCAAACCACCCTACTCTTTTCCTTGGACTCTAAGGGATTGTAATG
CTGCCAGTCAGAACAGCAGACTGCAGTAGAAGAGGGAAGGAAGCAGGCGAGAGCAAAGGAGAAA
AGGAGCCAGGCTGGGATTTCTTACCTCACGGTGGAGATCAACACAGAGCTCAGGTGGGCACAGC
TCATAGACAAAAGACGGCTATCCTGCCCAGTTTTTGCCTGGTGTCAACACTCCTTTTAAGAAGA
ACCTCTTAGCTATCCAAGGCCAGGAGTGCTGACCCTAGCGACTTCTCAGAGGTGACTCTGGCGC
CAGCTGGCGGACCAATGAGTGATGGCATCCCTGATACAAGACCGACTGACCACTGATCAGGACC
TGCTGCAAATGCAAGAAGGCACACTGATGCGGAAGGTGAGATCGAAAAGCTGGAAGAAGCCAAG
ATACTTCAGACTTCAGAATGATGGCATGACAGTCTGGCATGCTCGTCAGGCTAGGGGCAGTGAA
AAGCCCACCTTCTCAATCTCCGATGTGGAGACAGTGCGTAAAGGTCATGATTCTGAGTTGCTGC
GCAGCCTGGCAGATGAGTTCCCCCTGGAGCAGGGCTTCACCATTGTCTTCCATGGCCGCCGTCC
CAACCTGGATCTGATTGCCAACAGTGTTGAGGAGGCCCAGAACTGGATGCGAGGACTCCAGCTT
TTGGTGGACCTTGTTACCAGCATGGACCAAAAGGAGCGGCTGGACCAATGGTTGAGTGATTTGT
TCCAGCGTGGAGACAAAAACCAAGATGGTCGGATGACTTTCGAAGAAGTTCGGCGGTTATTGCG
TCTGATGAATGTGGAAATGGACCAAGAATATGCCTTTGGTCTTTTTCAGGAAGCAGACATGTCC
AATTCTGGGACTCTAGAAGGAGAAGAATTTGTATATTTCTATCAGGCATTGACAAAACGCACTG
AGGTGCATGAAATGTTTGAACAATTTTCTGATGATGGGCAGAAACTGACCCTGCTGGAATTTGT
GGATTTCCTTCGAGAGGAGCAGAAAGAAAGAGAGCGAGCCTCTGACCTTGCTCTGGAACTCATT
GACCGCTATGAGCCTTCAGAAAGTGGCAAACTGCGGCATGTGCTGAGCTTGGATGGCTTCCTCA
GCTACCTCTGCTCAAAGGATGGAGACATCTTCAACCCGGCCTGCCTTCCCATCTACCAGGATAT
GACTCAACCTCTGACCCACTACTTCATTAACTCCTCTCACAATACTTATCTCGTTGGGGACCAA
CTTTGTGGCCAGAGCAGCGTCGAGGGATATATACGGGCCCTGAAACGTGGGTGCCGCTGTGTGG
AGGTAGATGTATGGGATGGACCTAACGGGGAACCCATTGTTTATCACGGACACACCCTGACTTC
CCGAATCCTGTTCAAAGATGTTGTGGCCACAGTTAAACAATATGCCTTCCAGGCATCAGAATAT
CCACTCATCTTGTCCCTGGAGAACCACTGCACCTGGGAGCAGCAGCTGACCATGGTACGCCATC
TGACTGAGATCCTGGACGATCAGCTGCTGAGTTCCACCTTGGATGGGCTGCTACCTACTCAGCT
TCCCTCACCTGAGCAGCTTAAAGGGAAGATCTTAGTGAAGGGGAAGAAGTTAGGAACACTTGAG
GATGATCTTGAAGATGAGGAAGAAGTGACAGAACCCCAGCTGGAGAGACAGCAGGGGTCAGAAC
TGCCATTGGAGTCCCCCTCTAAGCCTGTGACACTGGAGCTGAGCCGCCTGAATAAGGACAAAAA
GAAGAAATCCAGGTCCGTCTTGTGTCCAGCCCTCTCTGACCTGGTTGTCTACCTGAAGTCTGTC
TCATTCCGCAGCTTCACCCATTCAAAGGAGAACTACCACTTCTATGAGATATCGTCCTTCTCTG
AAACCAAGGCCAAAAGCCTTGTCAAGGAGGCTGGCAATGAGTTTGTGCAGCACAATGCCTGGCA
GTTAAGCCGTGTGTATCCCAGTGGTCTGAGGACAGACTCATCCAACTACAACCCCCAGGAACTC
TGGAATGTAGGCTGCCAAATGGTGGCTATGAATATGCAGACTGCAGGGCTTGAAATGGACATCT
GTGATGGGCTCTTCCGCCAGAATAGTGGCTGTGGCTATGTGCTGAAGCCAGATTTCCTGCGTGA
TATCCAGAGTTCCTTCAACCCGGAGAAACCCCTCAGTCCTTTCAAGGCCCAGACTCTTTTGGTC
CAGGTTATCAGTGGTCAGCAACTCCCCAAAGTGAACAACACCAAAGAGAGGTCCATTGTGGACC
CACTGGTGAGAGTGGAGATCTATGGCATCCGTCCAGACACAACCTGCCAGGAGACCAACTATGT
GGAGAACAATGGTTTTAATCCCTACTGGGGTCAGACACTGTGCTTCCGGGTGCTGGTACCTGAA
CTTGCTATGCTGCGTTTTGTGGTTCAGGATTATGACTGGAAATCCCGAAATGACTTTATTGGTC
AATATACCTTGCCATGGACTTGCATGAAACAAGGTTACCGCCACATACACCTGCTCTCTAAAGA
TGGCATCAGCATCCACCCAGCTTCCATCTTTGTGTACATCTGCATCCGGGAAATGGAAGAGCCT
CAACCTGGGGAGTCTGAATTCTGAGTCTATGCTGGAGTTCCCTCCTTCCTCTTGCTGTAGGCTC
AGTCCCATACTCAGATCTACCACTAATCTCTCCCATCAACTCTGGTGCGAAAGCAAATTGCAAC
TAGAAACTCAGAGAGGAGCTTGGAGCAAAGAAACTTACAGAAGTATTATACCTTTAACTTCCTC
AAAGCCCTGAGCCAAGGGAAGGATAAATCAAGGCTCCTCAGGCAAAGGCTGAGGAAGGAGACCT
GACCCTAGGACTGTACCTTGACTCTCCAGAGAACAGCACACAGCCATGTCCCCACTGGGTTGCA
CCTCTCCAGTCTCCCTGGTGTAAATAGAGCTTCTCTCTCCAA

hide sequence

RefSeq Acc Id:

XM_021729936 ⟹ XP_021585611

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,715,521 - 174,742,104 (+)	NCBI
SpeTri2.0	NW_004936569	1,058,375 - 1,084,885 (+)	NCBI

Sequence:

show sequence

CTCACGGTGGAGATCAACACAGAGCTCAGGTGGGCACAGCTCATAGACAAAAGACGGCTATCCT
GCCCAGTTTTTGCCTGGTGTCAACACTCCTTTTAAGAAGAACCTCTTAGCTATCCAAGGCCAGG
AGTGCTGACCCTAGCGACTTCTCAGAGGTGACTCTGGCGCCAGCTGGCGGACCAATGAGTGATG
GCATCCCTGATACAAGACCGACTGACCACTGATCAGGACCTGCTGCAAATGCAAGAAGGCACAC
TGATGCGGAAGGTGAGATCGAAAAGCTGGAAGAAGCCAAGATACTTCAGACTTCAGAATGATGG
CATGACAGTCTGGCATGCTCGTCAGGCTAGGGGCAGTGAAAAGCCCACCTTCTCAATCTCCGAT
GTGGAGACAGTGCGTAAAGGTCATGATTCTGAGTTGCTGCGCAGCCTGGCAGATGAGTTCCCCC
TGGAGCAGGGCTTCACCATTGTCTTCCATGGCCGCCGTCCCAACCTGGATCTGATTGCCAACAG
TGTTGAGGAGGCCCAGAACTGGATGCGAGGACTCCAGCTTTTGGTGGACCTTGTTACCAGCATG
GACCAAAAGGAGCGGCTGGACCAATGGTTGAGTGATTTGTTCCAGCGTGGAGACAAAAACCAAG
ATGGTCGGATGACTTTCGAAGAAGTTCGGCGGTTATTGCGTCTGATGAATGTGGAAATGGACCA
AGAATATGCCTTTGGTCTTTTTCAGGAAGCAGACATGTCCAATTCTGGGACTCTAGAAGGAGAA
GAATTTGTATATTTCTATCAGGCATTGACAAAACGCACTGAGGTGCATGAAATGTTTGAACAAT
TTTCTGATGATGGGCAGAAACTGACCCTGCTGGAATTTGTGGATTTCCTTCGAGAGGAGCAGAA
AGAAAGAGAGCGAGCCTCTGACCTTGCTCTGGAACTCATTGACCGCTATGAGCCTTCAGAAAGT
GGCAAACTGCGGCATGTGCTGAGCTTGGATGGCTTCCTCAGCTACCTCTGCTCAAAGGATGGAG
ACATCTTCAACCCGGCCTGCCTTCCCATCTACCAGGATATGACTCAACCTCTGACCCACTACTT
CATTAACTCCTCTCACAATACTTATCTCGTTGGGGACCAACTTTGTGGCCAGAGCAGCGTCGAG
GGATATATACGGGCCCTGAAACGTGGGTGCCGCTGTGTGGAGGTAGATGTATGGGATGGACCTA
ACGGGGAACCCATTGTTTATCACGGACACACCCTGACTTCCCGAATCCTGTTCAAAGATGTTGT
GGCCACAGTTAAACAATATGCCTTCCAGGCATCAGAATATCCACTCATCTTGTCCCTGGAGAAC
CACTGCACCTGGGAGCAGCAGCTGACCATGGTACGCCATCTGACTGAGATCCTGGACGATCAGC
TGCTGAGTTCCACCTTGGATGGGCTGCTACCTACTCAGCTTCCCTCACCTGAGCAGCTTAAAGG
GAAGATCTTAGTGAAGGGGAAGAAGTTAGGAACACTTGAGGATGATCTTGAAGATGAGGAAGAA
GTGACAGAACCCCAGCTGGAGAGACAGCAGGGGTCAGAACTGCCATTGGAGTCCCCCTCTAAGC
CTGTGACACTGGAGCTGAGCCGCCTGAATAAGGACAAAAAGAAGGTTGTGATGTGCCCGCTGTT
TTGTCCGCCTATCTGTTGTCACATTGTGGCCCAGGCTTCTAATATCAATCTTGGGTCCCTTCTC
TTGCTTGAGCAGAAATCCAGGTCCGTCTTGTGTCCAGCCCTCTCTGACCTGGTTGTCTACCTGA
AGTCTGTCTCATTCCGCAGCTTCACCCATTCAAAGGAGAACTACCACTTCTATGAGATATCGTC
CTTCTCTGAAACCAAGGCCAAAAGCCTTGTCAAGGAGGCTGGCAATGAGTTTGTGCAGCACAAT
GCCTGGCAGTTAAGCCGTGTGTATCCCAGTGGTCTGAGGACAGACTCATCCAACTACAACCCCC
AGGAACTCTGGAATGTAGGCTGCCAAATGGTGGCTATGAATATGCAGACTGCAGGGCTTGAAAT
GGACATCTGTGATGGGCTCTTCCGCCAGAATAGTGGCTGTGGCTATGTGCTGAAGCCAGATTTC
CTGCGTGATATCCAGAGTTCCTTCAACCCGGAGAAACCCCTCAGTCCTTTCAAGGCCCAGACTC
TTTTGGTCCAGGTTATCAGTGGTCAGCAACTCCCCAAAGTGAACAACACCAAAGAGAGGTCCAT
TGTGGACCCACTGGTGAGAGTGGAGATCTATGGCATCCGTCCAGACACAACCTGCCAGGAGACC
AACTATGTGGAGAACAATGGTTTTAATCCCTACTGGGGTCAGACACTGTGCTTCCGGGTGCTGG
TACCTGAACTTGCTATGCTGCGTTTTGTGGTTCAGGATTATGACTGGAAATCCCGAAATGACTT
TATTGGTCAATATACCTTGCCATGGACTTGCATGAAACAAGGTTACCGCCACATACACCTGCTC
TCTAAAGATGGCATCAGCATCCACCCAGCTTCCATCTTTGTGTACATCTGCATCCGGGAAATGG
AAGAGCCTCAACCTGGGGAGTCTGAATTCTGAGTCTATGCTGGAGTTCCCTCCTTCCTCTTGCT
GTAGGCTCAGTCCCATACTCAGATCTACCACTAATCTCTCCCATCAACTCTGGTGCGAAAGCAA
ATTGCAACTAGAAACTCAGAGAGGAGCTTGGAGCAAAGAAACTTACAGAAGTATTATACCTTTA
ACTTCCTCAAAGCCCTGAGCCAAGGGAAGGATAAATCAAGGCTCCTCAGGCAAAGGCTGAGGAA
GGAGACCTGACCCTAGGACTGTACCTTGACTCTCCAGAGAACAGCACACAGCCATGTCCCCACT
GGGTTGCACCTCTCCAGTCTCCCTGGTGTAAATAGAGCTTCTCTCTCCAA

hide sequence

RefSeq Acc Id:

XM_021729941 ⟹ XP_021585616

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,715,521 - 174,756,001 (+)	NCBI
SpeTri2.0	NW_004936569	1,058,094 - 1,097,662 (+)	NCBI

Sequence:

show sequence

ATAAAAAACAGCAGCCAGGCTTTTCCTCTCTGGAGATGGTTGTCAAATCCATCTCAATCCTTTT
CTCTCACCCCACCCCCACCTCGAGTAACTGGTGTCCTGGGCCTTTAAGAGTTGAATGGGCTGGA
CTGAGAAAAGTGCTCCCACCTCAAACCACCCTACTCTTTTCCTTGGACTCTAAGGGATTGTAAT
GCTGCCAGTCAGAACAGCAGACTGCAGTAGAAGAGGGAAGGAAGCAGGCGAGAGCAAAGGAGAA
AAGGAGCCAGGCTGGGATTTCTTACCTCACGGTGGAGATCAACACAGAGCTCAGGTGGGCACAG
CTCATAGACAAAAGACGGCTATCCTGCCCAGTTTTTGCCTGGTGTCAACACTCCTTTTAAGAAG
AACCTCTTAGCTATCCAAGGCCAGGAGTGCTGACCCTAGCGACTTCTCAGAGGTGACTCTGGCG
CCAGCTGGCGGACCAATGAGTGATGGCATCCCTGATACAAGACCGACTGACCACTGATCAGGAC
CTGCTGCAAATGCAAGAAGGCACACTGATGCGGAAGGTGAGATCGAAAAGCTGGAAGAAGCCAA
GATACTTCAGACTTCAGAATGATGGCATGACAGTCTGGCATGCTCGTCAGGCTAGGGGCAGTGA
AAAGCCCACCTTCTCAATCTCCGATGTGGAGACAGTGCGTAAAGGTCATGATTCTGAGTTGCTG
CGCAGCCTGGCAGATGAGTTCCCCCTGGAGCAGGGCTTCACCATTGTCTTCCATGGCCGCCGTC
CCAACCTGGATCTGATTGCCAACAGTGTTGAGGAGGCCCAGAACTGGATGCGAGGACTCCAGCT
TTTGGTGGACCTTGTTACCAGCATGGACCAAAAGGAGCGGCTGGACCAATGGTTGAGTGATTTG
TTCCAGCGTGGAGACAAAAACCAAGATGGTCGGATGACTTTCGAAGAAGTTCGGCGGTTATTGC
GTCTGATGAATGTGGAAATGGACCAAGAATATGCCTTTGGTCTTTTTCAGGAAGCAGACATGTC
CAATTCTGGGACTCTAGAAGGAGAAGAATTTGTATATTTCTATCAGGCATTGACAAAACGCACT
GAGGTGCATGAAATGTTTGAACAATTTTCTGATGATGGGCAGAAACTGACCCTGCTGGAATTTG
TGGATTTCCTTCGAGAGGAGCAGAAAGAAAGAGAGCGAGCCTCTGACCTTGCTCTGGAACTCAT
TGACCGCTATGAGCCTTCAGAAAGTGGCAAACTGCGGCATGTGCTGAGCTTGGATGGCTTCCTC
AGCTACCTCTGCTCAAAGGATGGAGACATCTTCAACCCGGCCTGCCTTCCCATCTACCAGGATA
TGACTCAACCTCTGACCCACTACTTCATTAACTCCTCTCACAATACTTATCTCGTTGGGGACCA
ACTTTGTGGCCAGAGCAGCGTCGAGGGATATATACGGGCCCTGAAACGTGGGTGCCGCTGTGTG
GAGGTAGATGTATGGGATGGACCTAACGGGGAACCCATTGTTTATCACGGACACACCCTGACTT
CCCGAATCCTGTTCAAAGATGTTGTGGCCACAGTTAAACAATATGCCTTCCAGGCATCAGAATA
TCCACTCATCTTGTCCCTGGAGAACCACTGCACCTGGGAGCAGCAGCTGACCATGGTACGCCAT
CTGACTGAGATCCTGGACGATCAGCTGCTGAGTTCCACCTTGGATGGGCTGCTACCTACTCAGC
TTCCCTCACCTGAGCAGCTTAAAGGGAAGATCTTAGTGAAGGGGAAGAAGTTAGGAACACTTGA
GGATGATCTTGAAGATGAGGAAGAAGTGACAGAACCCCAGCTGGAGAGACAGCAGGGGTCAGAA
CTGCCATTGGAGTCCCCCTCTAAGCCTGTGACACTGGAGCTGAGCCGCCTGAATAAGGACAAAA
AGAAGGTTGTGATGTGCCCGCTGTTTTGTCCGCCTATCTGTTGTCACATTGTGGCCCAGGCTTC
TAATATCAATCTTGGGTCCCTTCTCTTGCTTGAGCAGAAATCCAGGTCCGTCTTGTGTCCAGCC
CTCTCTGACCTGGTTGTCTACCTGAAGTCTGTCTCATTCCGCAGCTTCACCCATTCAAAGGAGA
ACTACCACTTCTATGAGATATCGTCCTTCTCTGAAACCAAGGCCAAAAGCCTTGTCAAGGAGGC
TGGCAATGAGTTTGTGCAGCACAATGCCTGGCAGTTAAGCCGTGTGTATCCCAGTGGTCTGAGG
ACAGACTCATCCAACTACAACCCCCAGGAACTCTGGAATGTAGGCTGCCAAATGGTGGCTATGA
ATATGCAGACTGCAGGGCTTGAAATGGACATCTGTGATGGGCTCTTCCGCCAGAATAGTGGCTG
TGGCTATGTGCTGAAGCCAGATTTCCTGCGTGATATCCAGAGTTCCTTCAACCCGGAGAAACCC
CTCAGTCCTTTCAAGGCCCAGACTCTTTTGGTCCAGGTTATCAGTGGTCAGCAACTCCCCAAAG
TGAACAACACCAAAGAGAGGTCCATTGTGGACCCACTGGTGAGAGTGGAGATCTATGGCATCCG
TCCAGACACAACCTGCCAGGAGACCAACTATGTGGAGAACAATGGTTTTAATCCCTACTGGGGT
CAGACACTGTGCTTCCGGGTGCTGGTACCTGAACTTGCTATGCTGCGTTTTGTGGTTCAGGATT
ATGACTGGAAATCCCGAAATGACTTTATTGGTCAATATACCTTGCCATGGACTTGCATGAAACA
AGGTTACCGCCACATACACCTGCTCTCTAAAGATGGCATCAGCATCCACCCAGCTTCCATCTTT
GTGTACATCTGCATCCGGGAAATGGAAGAGCCTCAACCTGGGGAGTCTGAATTCTGAGGCAGGG
CACTGATGGATCCTGGCTTCATTCATACCTGGTGGCAGCTCCTGGGATGGAAGGCCCTGAACAG
CAGAAAGTTCTC

hide sequence

RefSeq Acc Id:

XM_040267819 ⟹ XP_040123753

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,715,521 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XM_040267820 ⟹ XP_040123754

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,715,534 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XM_040267821 ⟹ XP_040123755

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,715,521 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XM_040267823 ⟹ XP_040123757

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,714,969 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XM_040267824 ⟹ XP_040123758

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,714,969 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XM_040267825 ⟹ XP_040123759

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,714,969 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XM_040267826 ⟹ XP_040123760

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,715,526 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XM_040267827 ⟹ XP_040123761

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,716,855 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XM_040267829 ⟹ XP_040123763

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,715,521 - 174,756,001 (+)	NCBI

RefSeq Acc Id:

XM_040267830 ⟹ XP_040123764

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,715,521 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XM_040267831 ⟹ XP_040123765

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,716,854 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XM_040267832 ⟹ XP_040123766

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,717,384 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XM_040267833 ⟹ XP_040123767

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,715,521 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XM_040267835 ⟹ XP_040123769

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,715,521 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XM_040267836 ⟹ XP_040123770

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,715,521 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XM_040267837 ⟹ XP_040123771

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,715,521 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XM_040267838 ⟹ XP_040123772

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,721,141 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XR_005725861

Type:

NON-CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,715,521 - 174,742,104 (+)	NCBI

RefSeq Acc Id:

XR_005725862

Type:

NON-CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	174,715,521 - 174,756,001 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_013216321	(Get FASTA)	NCBI Sequence Viewer
	XP_021585611	(Get FASTA)	NCBI Sequence Viewer
	XP_021585616	(Get FASTA)	NCBI Sequence Viewer
	XP_040123753	(Get FASTA)	NCBI Sequence Viewer
	XP_040123754	(Get FASTA)	NCBI Sequence Viewer
	XP_040123755	(Get FASTA)	NCBI Sequence Viewer
	XP_040123757	(Get FASTA)	NCBI Sequence Viewer
	XP_040123758	(Get FASTA)	NCBI Sequence Viewer
	XP_040123759	(Get FASTA)	NCBI Sequence Viewer
	XP_040123760	(Get FASTA)	NCBI Sequence Viewer
	XP_040123761	(Get FASTA)	NCBI Sequence Viewer
	XP_040123763	(Get FASTA)	NCBI Sequence Viewer
	XP_040123764	(Get FASTA)	NCBI Sequence Viewer
	XP_040123765	(Get FASTA)	NCBI Sequence Viewer
	XP_040123766	(Get FASTA)	NCBI Sequence Viewer
	XP_040123767	(Get FASTA)	NCBI Sequence Viewer
	XP_040123769	(Get FASTA)	NCBI Sequence Viewer
	XP_040123770	(Get FASTA)	NCBI Sequence Viewer
	XP_040123771	(Get FASTA)	NCBI Sequence Viewer
	XP_040123772	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000005738.3
	ENSSTOP00000024224.1
	ENSSTOP00000031084.1
GenBank Protein	KAG3275232	(Get FASTA)	NCBI Sequence Viewer
	KAG3275233	(Get FASTA)	NCBI Sequence Viewer
	KAG3275234	(Get FASTA)	NCBI Sequence Viewer
	KAG3275235	(Get FASTA)	NCBI Sequence Viewer
	KAG3275236	(Get FASTA)	NCBI Sequence Viewer
	KAG3275237	(Get FASTA)	NCBI Sequence Viewer
	KAG3275238	(Get FASTA)	NCBI Sequence Viewer
	KAG3275239	(Get FASTA)	NCBI Sequence Viewer
	KAG3275240	(Get FASTA)	NCBI Sequence Viewer
	KAG3275241	(Get FASTA)	NCBI Sequence Viewer
	KAG3275242	(Get FASTA)	NCBI Sequence Viewer
	KAG3275243	(Get FASTA)	NCBI Sequence Viewer
	KAG3275244	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_013216321 ⟸ XM_013360867
- Peptide Label:	isoform X5
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASLIQDRLTTDQDLLQMQEGTLMRKVRSKSWKKPRYFRLQNDGMTVWHARQARGSEKPTFSIS DVETVRKGHDSELLRSLADEFPLEQGFTIVFHGRRPNLDLIANSVEEAQNWMRGLQLLVDLVTS MDQKERLDQWLSDLFQRGDKNQDGRMTFEEVRRLLRLMNVEMDQEYAFGLFQEADMSNSGTLEG EEFVYFYQALTKRTEVHEMFEQFSDDGQKLTLLEFVDFLREEQKERERASDLALELIDRYEPSE SGKLRHVLSLDGFLSYLCSKDGDIFNPACLPIYQDMTQPLTHYFINSSHNTYLVGDQLCGQSSV EGYIRALKRGCRCVEVDVWDGPNGEPIVYHGHTLTSRILFKDVVATVKQYAFQASEYPLILSLE NHCTWEQQLTMVRHLTEILDDQLLSSTLDGLLPTQLPSPEQLKGKILVKGKKLGTLEDDLEDEE EVTEPQLERQQGSELPLESPSKPVTLELSRLNKDKKKKSRSVLCPALSDLVVYLKSVSFRSFTH SKENYHFYEISSFSETKAKSLVKEAGNEFVQHNAWQLSRVYPSGLRTDSSNYNPQELWNVGCQM VAMNMQTAGLEMDICDGLFRQNSGCGYVLKPDFLRDIQSSFNPEKPLSPFKAQTLLVQVISGQQ LPKVNNTKERSIVDPLVRVEIYGIRPDTTCQETNYVENNGFNPYWGQTLCFRVLVPELAMLRFV VQDYDWKSRNDFIGQYTLPWTCMKQGYRHIHLLSKDGISIHPASIFVYICIREMEEPQPGESEF hide sequence

RefSeq Acc Id:	XP_021585616 ⟸ XM_021729941
- Peptide Label:	isoform X3
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASLIQDRLTTDQDLLQMQEGTLMRKVRSKSWKKPRYFRLQNDGMTVWHARQARGSEKPTFSIS DVETVRKGHDSELLRSLADEFPLEQGFTIVFHGRRPNLDLIANSVEEAQNWMRGLQLLVDLVTS MDQKERLDQWLSDLFQRGDKNQDGRMTFEEVRRLLRLMNVEMDQEYAFGLFQEADMSNSGTLEG EEFVYFYQALTKRTEVHEMFEQFSDDGQKLTLLEFVDFLREEQKERERASDLALELIDRYEPSE SGKLRHVLSLDGFLSYLCSKDGDIFNPACLPIYQDMTQPLTHYFINSSHNTYLVGDQLCGQSSV EGYIRALKRGCRCVEVDVWDGPNGEPIVYHGHTLTSRILFKDVVATVKQYAFQASEYPLILSLE NHCTWEQQLTMVRHLTEILDDQLLSSTLDGLLPTQLPSPEQLKGKILVKGKKLGTLEDDLEDEE EVTEPQLERQQGSELPLESPSKPVTLELSRLNKDKKKVVMCPLFCPPICCHIVAQASNINLGSL LLLEQKSRSVLCPALSDLVVYLKSVSFRSFTHSKENYHFYEISSFSETKAKSLVKEAGNEFVQH NAWQLSRVYPSGLRTDSSNYNPQELWNVGCQMVAMNMQTAGLEMDICDGLFRQNSGCGYVLKPD FLRDIQSSFNPEKPLSPFKAQTLLVQVISGQQLPKVNNTKERSIVDPLVRVEIYGIRPDTTCQE TNYVENNGFNPYWGQTLCFRVLVPELAMLRFVVQDYDWKSRNDFIGQYTLPWTCMKQGYRHIHL LSKDGISIHPASIFVYICIREMEEPQPGESEF hide sequence

RefSeq Acc Id:	XP_021585611 ⟸ XM_021729936
- Peptide Label:	isoform X3
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASLIQDRLTTDQDLLQMQEGTLMRKVRSKSWKKPRYFRLQNDGMTVWHARQARGSEKPTFSIS DVETVRKGHDSELLRSLADEFPLEQGFTIVFHGRRPNLDLIANSVEEAQNWMRGLQLLVDLVTS MDQKERLDQWLSDLFQRGDKNQDGRMTFEEVRRLLRLMNVEMDQEYAFGLFQEADMSNSGTLEG EEFVYFYQALTKRTEVHEMFEQFSDDGQKLTLLEFVDFLREEQKERERASDLALELIDRYEPSE SGKLRHVLSLDGFLSYLCSKDGDIFNPACLPIYQDMTQPLTHYFINSSHNTYLVGDQLCGQSSV EGYIRALKRGCRCVEVDVWDGPNGEPIVYHGHTLTSRILFKDVVATVKQYAFQASEYPLILSLE NHCTWEQQLTMVRHLTEILDDQLLSSTLDGLLPTQLPSPEQLKGKILVKGKKLGTLEDDLEDEE EVTEPQLERQQGSELPLESPSKPVTLELSRLNKDKKKVVMCPLFCPPICCHIVAQASNINLGSL LLLEQKSRSVLCPALSDLVVYLKSVSFRSFTHSKENYHFYEISSFSETKAKSLVKEAGNEFVQH NAWQLSRVYPSGLRTDSSNYNPQELWNVGCQMVAMNMQTAGLEMDICDGLFRQNSGCGYVLKPD FLRDIQSSFNPEKPLSPFKAQTLLVQVISGQQLPKVNNTKERSIVDPLVRVEIYGIRPDTTCQE TNYVENNGFNPYWGQTLCFRVLVPELAMLRFVVQDYDWKSRNDFIGQYTLPWTCMKQGYRHIHL LSKDGISIHPASIFVYICIREMEEPQPGESEF hide sequence

RefSeq Acc Id:	XP_040123758 ⟸ XM_040267824
- Peptide Label:	isoform X1
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123757 ⟸ XM_040267823
- Peptide Label:	isoform X1
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123759 ⟸ XM_040267825
- Peptide Label:	isoform X1
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123763 ⟸ XM_040267829
- Peptide Label:	isoform X1
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123755 ⟸ XM_040267821
- Peptide Label:	isoform X1
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123753 ⟸ XM_040267819
- Peptide Label:	isoform X1
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123764 ⟸ XM_040267830
- Peptide Label:	isoform X1
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123769 ⟸ XM_040267835
- Peptide Label:	isoform X3
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123771 ⟸ XM_040267837
- Peptide Label:	isoform X6
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123770 ⟸ XM_040267836
- Peptide Label:	isoform X4
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123767 ⟸ XM_040267833
- Peptide Label:	isoform X2
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123760 ⟸ XM_040267826
- Peptide Label:	isoform X1
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123754 ⟸ XM_040267820
- Peptide Label:	isoform X1
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123765 ⟸ XM_040267831
- Peptide Label:	isoform X1
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123761 ⟸ XM_040267827
- Peptide Label:	isoform X1
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123766 ⟸ XM_040267832
- Peptide Label:	isoform X1
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040123772 ⟸ XM_040267838
- Peptide Label:	isoform X7
- UniProtKB:	I3M7W3 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSSTOP00000005738 ⟸ ENSSTOT00000006419

RefSeq Acc Id:

ENSSTOP00000024224 ⟸ ENSSTOT00000031401

RefSeq Acc Id:

ENSSTOP00000031084 ⟸ ENSSTOT00000036031

Protein Domains

C2 EF-hand PH PI-PLC Y-box

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000006406	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000006419.3	UniProtKB/TrEMBL
	ENSSTOT00000031401.1	UniProtKB/TrEMBL
	ENSSTOT00000036031.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.29.30	UniProtKB/TrEMBL
	2.60.40.150	UniProtKB/TrEMBL
	3.20.20.190	UniProtKB/TrEMBL
	EF-hand	UniProtKB/TrEMBL
InterPro	C2_dom	UniProtKB/TrEMBL
	C2_domain_sf	UniProtKB/TrEMBL
	EF-hand-dom_pair	UniProtKB/TrEMBL
	EF_Hand_1_Ca_BS	UniProtKB/TrEMBL
	EF_hand_dom	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	PH_domain	UniProtKB/TrEMBL
	PI-PLC_fam	UniProtKB/TrEMBL
	PLC-like_Pdiesterase_TIM-brl	UniProtKB/TrEMBL
	PLC_EF-hand-like	UniProtKB/TrEMBL
	PLipase_C_PInositol-sp_X_dom	UniProtKB/TrEMBL
	PLipase_C_Pinositol-sp_Y	UniProtKB/TrEMBL
NCBI Gene	Plcd4	ENTREZGENE
PANTHER	PTHR10336	UniProtKB/TrEMBL
	PTHR10336:SF31	UniProtKB/TrEMBL
Pfam	EF-hand_like	UniProtKB/TrEMBL
	PF00168	UniProtKB/TrEMBL
	PF00169	UniProtKB/TrEMBL
	PI-PLC-X	UniProtKB/TrEMBL
	PI-PLC-Y	UniProtKB/TrEMBL
PRINTS	PHPHLIPASEC	UniProtKB/TrEMBL
PROSITE	EF_HAND_1	UniProtKB/TrEMBL
	EF_HAND_2	UniProtKB/TrEMBL
	PH_DOMAIN	UniProtKB/TrEMBL
	PIPLC_X_DOMAIN	UniProtKB/TrEMBL
	PIPLC_Y_DOMAIN	UniProtKB/TrEMBL
	PS50004	UniProtKB/TrEMBL
SMART	EFh	UniProtKB/TrEMBL
	PLCXc	UniProtKB/TrEMBL
	PLCYc	UniProtKB/TrEMBL
	SM00233	UniProtKB/TrEMBL
	SM00239	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
	SSF47473	UniProtKB/TrEMBL
	SSF49562	UniProtKB/TrEMBL
	SSF51695	UniProtKB/TrEMBL
UniProt	I3M7W3	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar