Pdhx (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404947 | 30,028,955 - 30,091,172 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936533 | 3,154,314 - 3,215,819 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936533 | 3,153,461 - 3,215,891 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PDHX (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 34,915,920 - 34,996,128 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 34,915,829 - 35,020,591 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 34,937,985 - 35,017,675 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 34,894,741 - 34,974,095 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 11 | 34,894,740 - 34,974,092 | NCBI | | | | | Celera | 11 | 35,085,014 - 35,165,000 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | p13 | NCBI | | | | | HuRef | 11 | 34,636,155 - 34,716,134 (+) | NCBI | | HuRef | | | CHM1_1 | 11 | 34,935,934 - 35,015,929 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 35,054,373 - 35,134,137 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Pdhx (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 102,851,400 - 102,903,858 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 102,851,420 - 102,903,858 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 103,021,055 - 103,073,513 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 103,021,075 - 103,073,513 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 102,861,212 - 102,913,670 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 102,821,916 - 102,874,350 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 104,263,925 - 104,317,607 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | E2 | NCBI | | | | | cM Map | 2 | 54.25 | NCBI | | | | |
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Pdhx (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 109,826,579 - 109,886,869 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 89,372,248 - 89,431,779 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 89,371,497 - 89,431,773 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 92,871,545 - 92,931,032 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 101,470,579 - 101,530,066 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 99,294,402 - 99,359,002 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 92,910,300 - 92,933,725 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 92,909,725 - 92,969,050 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 99,552,950 - 99,576,700 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 88,240,250 - 88,270,914 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 3 | 88,451,544 - 88,474,645 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q32 | NCBI | | | | |
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Pdhx (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955422 | 11,335,766 - 11,405,565 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955422 | 11,335,766 - 11,405,565 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PDHX (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 9 | 37,137,062 - 37,216,510 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 37,141,767 - 37,221,219 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 34,889,242 - 34,968,886 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 34,764,450 - 34,844,166 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 34,764,450 - 34,844,166 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PDHX (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 18 | 32,947,883 - 33,011,845 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 18 | 32,917,858 - 33,011,819 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 18 | 32,553,818 - 32,617,646 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 18 | 33,558,412 - 33,622,940 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 18 | 33,555,858 - 33,622,903 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 18 | 33,118,411 - 33,182,904 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 18 | 32,703,851 - 32,774,181 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 18 | 33,345,081 - 33,409,593 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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PDHX (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 2 | 26,014,970 - 26,103,402 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 26,014,954 - 26,094,895 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 28,381,683 - 28,461,798 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PDHX (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 1 | 30,270,567 - 30,344,929 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 30,269,957 - 30,344,494 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 127,384,875 - 127,458,466 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pdhx (Heterocephalus glaber - naked mole-rat) |
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