Agt (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024409344 | 43,547,972 - 43,555,916 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936484 | 19,716,165 - 19,721,261 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936484 | 19,713,299 - 19,721,144 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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AGT (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 1 | 230,702,523 - 230,745,583 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 230,690,776 - 230,745,576 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 230,838,269 - 230,881,329 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 228,904,892 - 228,916,564 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 227,145,019 - 227,156,602 | NCBI | | | | | Celera | 1 | 204,104,291 - 204,116,358 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q42.2 | NCBI | | | | | HuRef | 1 | 201,323,209 - 201,335,277 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 232,111,282 - 232,123,349 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 230,083,077 - 230,126,137 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Agt (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 8 | 125,283,326 - 125,296,445 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 125,283,273 - 125,296,445 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 124,556,587 - 124,569,706 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 124,556,534 - 124,569,706 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 127,080,487 - 127,093,607 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 127,442,677 - 127,455,773 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 128,860,995 - 128,873,954 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | E2 | NCBI | | | | | cM Map | 8 | 72.81 | NCBI | | | | |
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Agt (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 19 | 69,426,540 - 69,447,017 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 19 | 52,529,139 - 52,549,618 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 19 | 52,529,185 - 52,540,977 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 19 | 59,313,724 - 59,325,510 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 19 | 60,165,792 - 60,177,589 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 19 | 62,240,179 - 62,251,965 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 19 | 57,321,594 - 57,333,460 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 19 | 57,321,640 - 57,333,433 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 19 | 68,026,182 - 68,038,550 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 19 | 54,738,556 - 54,750,349 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 19 | 54,743,436 - 54,755,230 (-) | NCBI | | | | | Celera | 19 | 51,899,180 - 51,910,819 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | q12 | NCBI | | | | |
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Agt (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955492 | 7,866,833 - 7,873,357 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955492 | 7,863,662 - 7,874,863 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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AGT (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 18,492,156 - 18,503,638 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 18,684,644 - 18,696,136 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 206,252,141 - 206,263,830 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 211,279,015 - 211,291,044 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 211,279,015 - 211,291,044 (-) | Ensembl | panpan1.1 | | panPan2 | |
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AGT (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 4 | 8,681,192 - 8,694,059 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 4 | 8,683,798 - 8,693,880 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 4 | 8,672,874 - 8,685,743 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 4 | 8,705,485 - 8,718,357 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 4 | 8,705,603 - 8,718,382 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 4 | 8,709,653 - 8,722,523 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 4 | 8,831,567 - 8,844,457 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 4 | 9,061,768 - 9,074,658 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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AGT (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 14 | 59,643,292 - 59,656,833 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 59,643,030 - 59,656,835 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 64,380,799 - 64,385,995 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
AGT (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 25 | 67,964,840 - 67,977,006 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 25 | 67,962,401 - 67,973,324 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666055 | 69,870,396 - 69,882,850 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Agt (Heterocephalus glaber - naked mole-rat) |
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