Hk1 (hexokinase 1) - Rat Genome Database

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Gene: Hk1 (hexokinase 1) Ictidomys tridecemlineatus
Analyze
Symbol: Hk1
Name: hexokinase 1
RGD ID: 12637026
Description: ENCODES a protein that exhibits ATP binding (ortholog); glucokinase activity (ortholog); glucose binding (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); fructose 6-phosphate metabolic process (ortholog); glycolytic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; fructose and mannose metabolic pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); anemia (ortholog); Animal Disease Models (ortholog); FOUND IN caveola (ortholog); cytosol (ortholog); mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: hexokinase-1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721360,574,470 - 60,681,207 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365219,066,999 - 9,159,793 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365219,067,062 - 9,139,112 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Hk1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721360,574,470 - 60,681,207 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365219,066,999 - 9,159,793 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365219,067,062 - 9,139,112 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HK1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381069,270,000 - 69,401,882 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1069,269,984 - 69,401,884 (+)EnsemblGRCh38hg38GRCh38
GRCh371071,029,756 - 71,161,638 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361070,699,762 - 70,831,641 (+)NCBINCBI36Build 36hg18NCBI36
Build 341070,748,628 - 70,831,641NCBI
Celera1064,305,609 - 64,438,051 (+)NCBICelera
Cytogenetic Map10q22.1NCBI
HuRef1065,029,590 - 65,161,554 (+)NCBIHuRef
CHM1_11071,311,204 - 71,443,383 (+)NCBICHM1_1
T2T-CHM13v2.01070,138,041 - 70,269,925 (+)NCBIT2T-CHM13v2.0
Hk1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391062,104,634 - 62,215,699 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1062,104,634 - 62,215,687 (-)EnsemblGRCm39 Ensembl
GRCm381062,268,855 - 62,379,920 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1062,268,855 - 62,379,908 (-)EnsemblGRCm38mm10GRCm38
MGSCv371061,731,603 - 61,842,656 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361061,665,219 - 61,775,240 (-)NCBIMGSCv36mm8
Celera1063,372,104 - 63,483,135 (-)NCBICelera
Cytogenetic Map10B4NCBI
cM Map1032.37NCBI
Hk1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82030,773,222 - 30,874,814 (-)NCBIGRCr8
mRatBN7.22030,230,488 - 30,332,099 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2030,230,486 - 30,332,131 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2031,241,422 - 31,343,013 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02030,632,326 - 30,733,917 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02031,368,974 - 31,470,744 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02031,911,460 - 31,979,780 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2031,912,262 - 31,956,649 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02033,703,472 - 33,770,598 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2031,652,769 - 31,721,279 (-)NCBICelera
Cytogenetic Map20q11NCBI
Hk1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543721,731,584 - 21,816,324 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543721,733,314 - 21,824,303 (-)NCBIChiLan1.0ChiLan1.0
HK1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2881,415,804 - 81,549,666 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11081,421,126 - 81,554,987 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01065,786,940 - 65,870,204 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11068,289,288 - 68,401,045 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1068,289,288 - 68,401,045 (+)Ensemblpanpan1.1panPan2
HK1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1420,396,761 - 20,516,889 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl420,421,526 - 20,518,211 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha420,527,050 - 20,646,926 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0420,668,689 - 20,788,765 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl420,668,656 - 20,789,520 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1420,569,179 - 20,688,937 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0420,773,025 - 20,892,822 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0421,116,100 - 21,236,182 (+)NCBIUU_Cfam_GSD_1.0
HK1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1472,351,246 - 72,460,924 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11472,383,328 - 72,460,927 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21478,486,933 - 78,521,251 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HK1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1961,917,501 - 62,029,737 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl961,917,440 - 62,001,843 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604822,657,626 - 22,744,799 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hk1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247543,591,090 - 3,659,760 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247543,594,478 - 3,656,231 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000029461   ⟹   ENSSTOP00000016178
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365219,067,946 - 9,142,037 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000035969   ⟹   ENSSTOP00000032607
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365219,067,946 - 9,159,793 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000037114   ⟹   ENSSTOP00000027784
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365219,097,546 - 9,142,037 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000039976   ⟹   ENSSTOP00000026834
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365219,066,999 - 9,139,783 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000040627   ⟹   ENSSTOP00000028876
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365219,096,963 - 9,125,544 (-)Ensembl
RefSeq Acc Id: XM_005325959   ⟹   XP_005326016
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440721360,574,470 - 60,646,379 (-)NCBI
SpeTri2.0NW_0049365219,067,062 - 9,139,112 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040273244   ⟹   XP_040129178
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440721360,574,470 - 60,681,207 (-)NCBI
RefSeq Acc Id: XM_040273245   ⟹   XP_040129179
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440721360,574,470 - 60,676,616 (-)NCBI
RefSeq Acc Id: XM_040273246   ⟹   XP_040129180
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440721360,574,470 - 60,649,268 (-)NCBI
RefSeq Acc Id: XM_040273248   ⟹   XP_040129182
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440721360,574,470 - 60,646,051 (-)NCBI
RefSeq Acc Id: XP_005326016   ⟸   XM_005325959
- Peptide Label: isoform X1
- UniProtKB: A0A287D014 (UniProtKB/TrEMBL),   I3MVN3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040129178   ⟸   XM_040273244
- Peptide Label: isoform X2
- UniProtKB: A0A287DGH0 (UniProtKB/TrEMBL),   I3MVN3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040129179   ⟸   XM_040273245
- Peptide Label: isoform X2
- UniProtKB: A0A287DGH0 (UniProtKB/TrEMBL),   I3MVN3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040129180   ⟸   XM_040273246
- Peptide Label: isoform X3
- UniProtKB: I3MVN3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040129182   ⟸   XM_040273248
- Peptide Label: isoform X3
- UniProtKB: I3MVN3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000016178   ⟸   ENSSTOT00000029461
RefSeq Acc Id: ENSSTOP00000028876   ⟸   ENSSTOT00000040627
RefSeq Acc Id: ENSSTOP00000027784   ⟸   ENSSTOT00000037114
RefSeq Acc Id: ENSSTOP00000032607   ⟸   ENSSTOT00000035969
RefSeq Acc Id: ENSSTOP00000026834   ⟸   ENSSTOT00000039976

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000023877 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000029461.2 UniProtKB/TrEMBL
  ENSSTOT00000035969.1 UniProtKB/TrEMBL
  ENSSTOT00000037114.1 UniProtKB/TrEMBL
  ENSSTOT00000039976.1 UniProtKB/TrEMBL
  ENSSTOT00000040627.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.420.40 UniProtKB/TrEMBL
  3.40.367.20 UniProtKB/TrEMBL
InterPro ATPase_NBD UniProtKB/TrEMBL
  Hexokinase UniProtKB/TrEMBL
  Hexokinase_BS UniProtKB/TrEMBL
  Hexokinase_C UniProtKB/TrEMBL
  Hexokinase_N UniProtKB/TrEMBL
NCBI Gene Hk1 ENTREZGENE
PANTHER HEXOKINASE-1 UniProtKB/TrEMBL
  PTHR19443 UniProtKB/TrEMBL
Pfam Hexokinase_1 UniProtKB/TrEMBL
  Hexokinase_2 UniProtKB/TrEMBL
PRINTS HEXOKINASE UniProtKB/TrEMBL
PROSITE HEXOKINASE_1 UniProtKB/TrEMBL
  HEXOKINASE_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF53067 UniProtKB/TrEMBL
UniProt A0A287D014 ENTREZGENE, UniProtKB/TrEMBL
  A0A287D2M8_ICTTR UniProtKB/TrEMBL
  A0A287D5L1_ICTTR UniProtKB/TrEMBL
  A0A287DGH0 ENTREZGENE, UniProtKB/TrEMBL
  I3MVN3 ENTREZGENE, UniProtKB/TrEMBL