Metap2 (methionyl aminopeptidase 2) - Rat Genome Database

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Gene: Metap2 (methionyl aminopeptidase 2) Ictidomys tridecemlineatus
Analyze
Symbol: Metap2
Name: methionyl aminopeptidase 2
RGD ID: 12577681
Description: ENCODES a protein that exhibits aminopeptidase activity (inferred); hydrolase activity (inferred); initiator methionyl aminopeptidase activity (inferred); INVOLVED IN protein processing (inferred); proteolysis (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: methionine aminopeptidase 2; methionyl aminopeptidase 2, transcript variant X1; methionyl aminopeptidase 2, transcript variant X2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494524,573,140 - 24,610,683 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650711,624,060 - 11,660,875 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650711,624,696 - 11,661,632 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
cytosol  (IEA)
plasma membrane  (IEA)

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Metap2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494524,573,140 - 24,610,683 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650711,624,060 - 11,660,875 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650711,624,696 - 11,661,632 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
METAP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381295,474,152 - 95,515,839 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1295,473,520 - 95,515,839 (+)EnsemblGRCh38hg38GRCh38
GRCh371295,867,928 - 95,909,615 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361294,391,953 - 94,433,746 (+)NCBINCBI36Build 36hg18NCBI36
Build 341294,370,389 - 94,410,587NCBI
Celera1295,538,718 - 95,580,736 (+)NCBICelera
Cytogenetic Map12q22NCBI
HuRef1292,936,350 - 92,977,989 (+)NCBIHuRef
CHM1_11295,833,252 - 95,875,049 (+)NCBICHM1_1
T2T-CHM13v2.01295,455,178 - 95,496,879 (+)NCBIT2T-CHM13v2.0
Metap2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391093,694,351 - 93,732,952 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1093,694,351 - 93,732,955 (-)EnsemblGRCm39 Ensembl
GRCm381093,858,489 - 93,897,090 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1093,858,489 - 93,897,093 (-)EnsemblGRCm38mm10GRCm38
MGSCv371093,321,234 - 93,353,947 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361093,288,288 - 93,321,001 (-)NCBIMGSCv36mm8
Celera1095,828,659 - 95,861,285 (-)NCBICelera
Cytogenetic Map10C2NCBI
cM Map1048.69NCBI
Metap2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8730,299,433 - 30,327,477 (-)NCBIGRCr8
mRatBN7.2728,412,429 - 28,440,458 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl728,411,608 - 28,440,434 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx730,402,812 - 30,430,792 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0732,565,048 - 32,593,032 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0732,342,482 - 32,370,504 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0734,762,241 - 34,789,456 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl734,762,231 - 34,789,479 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0734,821,214 - 34,848,430 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4730,974,071 - 31,001,641 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1730,994,341 - 31,021,912 (-)NCBI
Celera725,509,781 - 25,535,670 (-)NCBICelera
Cytogenetic Map7q13NCBI
Metap2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540531,942,427 - 31,976,678 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540531,942,427 - 31,976,678 (+)NCBIChiLan1.0ChiLan1.0
METAP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210103,548,786 - 103,590,522 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112103,545,904 - 103,586,912 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01293,068,921 - 93,109,098 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11296,461,418 - 96,503,087 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1296,461,549 - 96,503,508 (+)Ensemblpanpan1.1panPan2
METAP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11535,363,494 - 35,398,926 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1535,363,528 - 35,398,168 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1535,750,123 - 35,785,289 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01536,028,074 - 36,063,311 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1536,028,136 - 36,064,772 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11535,301,082 - 35,336,182 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01535,395,570 - 35,430,722 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01535,658,719 - 35,693,877 (+)NCBIUU_Cfam_GSD_1.0
METAP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl587,888,674 - 87,926,148 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1587,890,821 - 87,926,155 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2592,091,623 - 92,127,676 (-)NCBISscrofa10.2Sscrofa10.2susScr3
METAP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11190,872,672 - 90,914,257 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1190,872,699 - 90,912,499 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037154,255,439 - 154,297,723 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Metap2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475011,726,303 - 11,756,671 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000006955   ⟹   ENSSTOP00000006216
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493650711,624,640 - 11,660,875 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000034628   ⟹   ENSSTOP00000029977
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493650711,624,060 - 11,660,434 (+)Ensembl
RefSeq Acc Id: XM_005324444   ⟹   XP_005324501
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494524,573,140 - 24,610,683 (-)NCBI
SpeTri2.0NW_00493650711,624,696 - 11,660,886 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013358230   ⟹   XP_013213684
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494524,573,140 - 24,610,647 (-)NCBI
SpeTri2.0NW_00493650711,624,696 - 11,661,632 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040279860   ⟹   XP_040135794
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494524,573,140 - 24,610,028 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005324501 (Get FASTA)   NCBI Sequence Viewer  
  XP_013213684 (Get FASTA)   NCBI Sequence Viewer  
  XP_040135794 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000006216.2
  ENSSTOP00000029977.1
GenBank Protein KAG3291234 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291235 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005324501   ⟸   XM_005324444
- Peptide Label: isoform X1
- UniProtKB: I3M8U9 (UniProtKB/TrEMBL),   A0A287D8T4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013213684   ⟸   XM_013358230
- Peptide Label: isoform X2
- UniProtKB: A0A287D8T4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040135794   ⟸   XM_040279860
- Peptide Label: isoform X3
- UniProtKB: A0A287D8T4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000029977   ⟸   ENSSTOT00000034628
RefSeq Acc Id: ENSSTOP00000006216   ⟸   ENSSTOT00000006955
Protein Domains
Peptidase M24


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000006960 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000006955.3 UniProtKB/TrEMBL
  ENSSTOT00000034628.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.10 UniProtKB/TrEMBL
  3.90.230.10 UniProtKB/TrEMBL
InterPro Creatinase/aminopeptidase-like UniProtKB/TrEMBL
  Pept_M24 UniProtKB/TrEMBL
  Pept_M24_MAP UniProtKB/TrEMBL
  Pept_M24A_MAP2 UniProtKB/TrEMBL
  Pept_M24A_MAP2_BS UniProtKB/TrEMBL
  WH-like_DNA-bd_sf UniProtKB/TrEMBL
  WH_DNA-bd_sf UniProtKB/TrEMBL
NCBI Gene Metap2 ENTREZGENE
PANTHER METHIONINE AMINOPEPTIDASE 2 UniProtKB/TrEMBL
  METHIONINE AMINOPEPTIDASE 2 UniProtKB/TrEMBL
Pfam Peptidase_M24 UniProtKB/TrEMBL
PRINTS MAPEPTIDASE UniProtKB/TrEMBL
PROSITE MAP_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF46785 UniProtKB/TrEMBL
  SSF55920 UniProtKB/TrEMBL
UniProt A0A287D8T4 ENTREZGENE, UniProtKB/TrEMBL
  I3M8U9 ENTREZGENE, UniProtKB/TrEMBL