Ube2q2 (ubiquitin conjugating enzyme E2 Q2)

Gene: Ube2q2 (ubiquitin conjugating enzyme E2 Q2) Ictidomys tridecemlineatus

Analyze

Symbol:

Ube2q2

Name:

ubiquitin conjugating enzyme E2 Q2

RGD ID:

12564135

Description:

ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (inferred); ubiquitin-protein transferase activity (inferred); INVOLVED IN protein K48-linked ubiquitination (inferred); ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); congenital dyserythropoietic anemia (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ubiquitin conjugating enzyme E2 Q2, transcript variant X1; ubiquitin conjugating enzyme E2 Q2, transcript variant X2; ubiquitin-conjugating enzyme E2 Q2

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	118,409,391 - 118,466,976 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	36,257,454 - 36,314,634 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	36,257,454 - 36,314,634 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bloom syndrome (ISO)

colorectal cancer (ISO)

congenital dyserythropoietic anemia (ISO)

genetic disease (ISO)

schizophrenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

protein K48-linked ubiquitination (IEA)

Molecular Function

protein binding (ISO)

ubiquitin conjugating enzyme activity (IEA)

ubiquitin-protein transferase activity (IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Ube2q2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	118,409,391 - 118,466,976 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	36,257,454 - 36,314,634 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	36,257,454 - 36,314,634 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

UBE2Q2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	75,843,447 - 75,901,078 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	75,843,307 - 75,901,078 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	76,135,788 - 76,193,419 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	73,922,855 - 73,980,440 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	15	53,061,306 - 53,119,318 (+)	NCBI		Celera
Cytogenetic Map	15	q24.2	NCBI
HuRef	15	52,891,934 - 52,949,669 (+)	NCBI		HuRef
CHM1_1	15	76,255,115 - 76,312,875 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	73,714,215 - 73,771,828 (+)	NCBI		T2T-CHM13v2.0

Ube2q2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	55,056,602 - 55,114,813 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	55,056,138 - 55,114,813 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	55,149,369 - 55,207,529 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	55,148,854 - 55,207,529 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	54,997,176 - 55,055,336 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	54,947,515 - 55,005,665 (+)	NCBI		MGSCv36	mm8
Celera	9	52,388,923 - 52,447,126 (+)	NCBI		Celera
Cytogenetic Map	9	B	NCBI
cM Map	9	29.84	NCBI

Ube2q2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	64,414,502 - 64,474,425 (+)	NCBI		GRCr8
mRatBN7.2	8	55,518,402 - 55,578,342 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	55,519,147 - 55,577,212 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	61,061,036 - 61,120,343 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	59,340,035 - 59,399,342 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	57,204,275 - 57,263,583 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	59,709,972 - 59,754,102 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	59,711,549 - 59,766,889 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	58,292,660 - 58,349,722 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	58,688,257 - 58,749,088 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	58,649,776 - 58,767,495 (+)	NCBI
Celera	8	55,002,483 - 55,063,447 (+)	NCBI		Celera
Cytogenetic Map	8	q24	NCBI

Ube2q2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955450	1,102,404 - 1,152,272 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955450	1,102,404 - 1,151,511 (+)	NCBI	ChiLan1.0	ChiLan1.0

UBE2Q2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	65,039,568 - 65,099,304 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	69,203,817 - 69,263,442 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	54,754,642 - 54,814,264 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	74,347,970 - 74,407,411 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	74,348,034 - 74,407,411 (+)	Ensembl	panpan1.1		panPan2

UBE2Q2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	40,130,456 - 40,189,244 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	40,101,540 - 40,189,159 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	39,987,498 - 40,046,156 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	40,332,605 - 40,391,338 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	40,303,037 - 40,391,328 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	40,280,628 - 40,339,398 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	40,328,240 - 40,386,850 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	40,565,814 - 40,624,486 (-)	NCBI		UU_Cfam_GSD_1.0

UBE2Q2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	56,084,072 - 56,144,916 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	56,084,017 - 56,144,915 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

UBE2Q2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	7,390,115 - 7,448,304 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	7,389,997 - 7,448,137 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	134,266,369 - 134,325,098 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ube2q2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624894	2,179,617 - 2,233,855 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624894	2,179,617 - 2,233,800 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005316843	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005316845	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040275328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040275329	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040275330	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002484314	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010003700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000003220 ⟹ ENSSTOP00000002874

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936471	36,257,454 - 36,314,634 (-)	Ensembl

RefSeq Acc Id:

ENSSTOT00000032636 ⟹ ENSSTOP00000027538

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936471	36,257,454 - 36,314,634 (-)	Ensembl

RefSeq Acc Id:

XM_005316843 ⟹ XP_005316900

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	118,409,391 - 118,466,492 (-)	NCBI
SpeTri2.0	NW_004936471	36,257,454 - 36,314,634 (-)	NCBI

Sequence:

show sequence

GGGGGCGCGCGCACTGGCCACGAGCACGCGCCGGAACGGGGGCGCGCGGGGCTATGGGGGCGGG
GCGGGGGCAGCCCTTTCCCAGGCGGTAGCGGGGCGGCGACGCTCTTACCCTTTTAAGCCGCGGG
GCCGCCGCCTCCTGCCCGTGGGGTCGGTTACAAAGGGAGCAGCGGCTCGGGCGCCGCACAGCTG
CCTGCTGAGGCCTCGCGCCCCTCGCCATTTTCCAGCCGCGCTCCGACGCGGGTCGCGGCGGCGG
GGAGAGGCGGAGCCGCAAGAGCGCGGCCCGGGCCGGCCCCGCGGGGCGGTCGCGGCCGTGACGG
CGGCTCCGGGCCCAGCTCCCCTTCCGCACCCCTCCCGCCGGAGATGAGGGGAAGATGTCGGTGT
CAGGGCTCAAGACCGAGCTGAAGTTCTTGGCGTCCATCTTCGACAAGAACCACGAGCGATTCCG
CATCGTCAGCTGGAAGCTGGACGAACTGCACTGCCAGTTCCTGGTGCCGCCGCCGGCGCCGCCG
GGCAGCCCGCACTCACCGCAGCCGCCGCTCACACTCCACTGCAACATCACGGAATCTTACCCAT
CTTCTTCACCAATATGGTTTGTGGACTCTGATGACCCAACTCTGACATCGGTTCTGGAACGTCT
AGAAGATACTAAGAACAACAACACGCTTCGTCAGCAATTGAAGTGGTTGATATGTGAACTCTGC
AGATTATATAACCTTCCTAAGCACCTGGATGTTGAGATGCTAGATCAACCACTACCCACGGGTC
AGAATGGAACAACAGAAGAAGTGACTTCAGAAGAGGAGGAGGAAGAAGAGATGGCTGAAGATAT
AGAAGACTTGGATCATTATGAGATGAAGGAAGAAGAGCCTATTAATGGGAAAAAGTCAGAGGAT
GAAGGAATTGAAAAAGAAAATTTGGCAATATTAGAAAAAATTAGGAAGACTCAAAGGCAAGACC
ATTTAAATGGTGCGGTGTCTGGGTCAGTGCAAGCTTCAGATAGACTTATGAAAGAGCTCAGGGA
CATATACAGATCACAGAGTTATAAAACAGGGATTTATTCAGTGGAACTCATAAATGACAGTTTA
TATGACTGGCATGTTAAACTGCAGAAGGTTGACCCTGATAGTCCGTTGCACAGTGATCTTCAGA
TCTTAAAAGAAAAAGAAGGCATAGAATATATTTTGCTTAACTTCTCTTTTAAGGATAACTTTCC
CTTTGATCCTCCATTTGTTCGAGTGGTATTACCTGTTCTCTCAGGAGGGTACGTCTTGGGTGGA
GGAGCATTATGTATGGAACTTCTCACAAAACAGGGCTGGAGCAGTGCCTATTCAATAGAATCAG
TCATCATGCAAATAAATGCCACTTTAGTCAAAGGCAAGGCCAGAGTGCAGTTTGGAGCAAATAA
GAATCAATATAATCTAGCAAGAGCCCAACAGTCCTATAATTCCATTGTACAGATACATGAGAAA
AATGGCTGGTACACTCCTCCAAAGGAAGATGGCTAAATATGTTGACTCTCATATGTTTGGACCA
ATGTTGCTTTAAAGAAAATCTTTCCAACATGCAGATACAAGCTTTGAGTGCCCCTATAACAGCA
GTACTGAAGATGTTAGCTAATAGATATTTTAGTGGATAATCTGTCAACTGACATCGAGTATAAG
TTACAGCCTTTTCATTTTGCTCACTTCAGTTATCTTGGACTGAGCAGTGGGGCCTTTACTGTAT
TTTCCTGATAAATACACTTACTGGCCACTCCTTATCTTTTTTTCTTGAAAAGTGAAATCTTTTA
AGCAGGCAAGTCAGCATCAGGTTACTGTGGTTGCGACTTGGCAGTAGCTTTCCTATACTGAGTT
CATGGGTTTTGAGGATTTGCAATATACTGTTCCATTTAGAGCCAATAAAAGTTTAATCAATGTT
CAATTGGTTTAGAAAATTTTAAGCCTTCTAAACCACGGCCTTTTAAGGTCTAAAACCATTTTAT
GATATTGCCAACTTAATGACAGGAAATTTACTCATTAAATTGTTAAAAACTTTTTTATGGCTGT
GTGAAGATATGAACTGTTTCATGAAGATATGCTCTTACTTGAATTGTACGTTTTAGGCAAAGCA
AAGTAAGGCAATGCCACTTAAGGCTTGTTGAGTAGTAATTTCCACTGGGGCAGAAGAGTCTTGC
TGGGCTGAATCGAATTGGTTTCTTTTGGTTCAATATTTCTTACAAAGAAGAGCCACAATATGGA
GCTTGAAGTTATTTAAAATACTAAGTCATTTTACCTTTCCATTTTATTAACGGGATGTTGCAAT
GATTTGTAAACTAATAAACTTATAAAGTGATTGGCATGAAAACAGACTTCCTTGAGCAAAAAGC
TATATAGTTAAGTACAAAAAGATACCTGATTTGGAGACTCTTTGTTGTCATGACAATGGCTTTT
ACAACCAGAAGACTAATAGGAACTCATTATTCTTTTGTACAACCTGACTCAAATCAATGTACTC
TCCATTTTACTGCCTTACACGAATCAGTCCTGTTTGGTTGGTGAGAGATTTTTTTTTTTTTTAA
TAAACCCAAGTTTGATTTAAAAATAAATTCTAGTTATTAAGCACTTTTTAAAAGAAACCCAGAA
GCACATTTTTCTGCACAAACCAGTTACAAAGTTGAAACACATTTCTTATGCATTTGCTTTGATT
GTTTTTAACTTTGTAAACCATATCTGAGAGATTTGACACTTATGCATTATTGTGTTTCTTTTGA
TTTTATTTTGGTTAGGACAGTAGATAAAGATCTTCTGGCATTCTTGCTCACTTTAAATTTATAT
AAAGCTCTGATTGCCAGCTGCTCAGATAACAAGTGACAAGGCAGAATTCTTTAAAGCATTAAAG
TTCCTTAAGCCTAAGGCTAAATCTTGAATACATTATTGAATTCTTTAATATCCTGATGGCTAGC
AGATTGACAGCTGCACATTTGGCATGCTTTGTTTTTTGGATTTTATTTTTCATTGCAGATTTAT
TTGGCAATGTACAGTAAATTTTGTAAACTTGCATCAAGTTTATGAATAAAGAACCATTTAAAAA
TTA

hide sequence

RefSeq Acc Id:

XM_005316845 ⟹ XP_005316902

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	118,409,391 - 118,466,548 (-)	NCBI
SpeTri2.0	NW_004936471	36,257,454 - 36,314,634 (-)	NCBI

Sequence:

show sequence

GGGGGCGCGCGCACTGGCCACGAGCACGCGCCGGAACGGGGGCGCGCGGGGCTATGGGGGCGGG
GCGGGGGCAGCCCTTTCCCAGGCGGTAGCGGGGCGGCGACGCTCTTACCCTTTTAAGCCGCGGG
GCCGCCGCCTCCTGCCCGTGGGGTCGGTTACAAAGGGAGCAGCGGCTCGGGCGCCGCACAGCTG
CCTGCTGAGGCCTCGCGCCCCTCGCCATTTTCCAGCCGCGCTCCGACGCGGGTCGCGGCGGCGG
GGAGAGGCGGAGCCGCAAGAGCGCGGCCCGGGCCGGCCCCGCGGGGCGGTCGCGGCCGTGACGG
CGGCTCCGGGCCCAGCTCCCCTTCCGCACCCCTCCCGCCGGAGATGAGGGGAAGATGTCGGTGT
CAGGGCTCAAGACCGAGCTGAAGTTCTTGGCGTCCATCTTCGACAAGAACCACGAGCGATTCCG
CATCGTCAGCTGGAAGCTGGACGAACTGCACTGCCAGTTCCTGGTGCCGCCGCCGGCGCCGCCG
GGCAGCCCGCACTCACCGCAGCCGCCGCTCACACTCCACTGCAACATCACGGAATCTTACCCAT
CTTCTTCACCAATATGGTTTGTGGACTCTGATGACCCAACTCTGACATCGGTTCTGGAACGTCT
AGAAGATACTAAGAACAACAACACGAATGGAACAACAGAAGAAGTGACTTCAGAAGAGGAGGAG
GAAGAAGAGATGGCTGAAGATATAGAAGACTTGGATCATTATGAGATGAAGGAAGAAGAGCCTA
TTAATGGGAAAAAGTCAGAGGATGAAGGAATTGAAAAAGAAAATTTGGCAATATTAGAAAAAAT
TAGGAAGACTCAAAGGCAAGACCATTTAAATGGTGCGGTGTCTGGGTCAGTGCAAGCTTCAGAT
AGACTTATGAAAGAGCTCAGGGACATATACAGATCACAGAGTTATAAAACAGGGATTTATTCAG
TGGAACTCATAAATGACAGTTTATATGACTGGCATGTTAAACTGCAGAAGGTTGACCCTGATAG
TCCGTTGCACAGTGATCTTCAGATCTTAAAAGAAAAAGAAGGCATAGAATATATTTTGCTTAAC
TTCTCTTTTAAGGATAACTTTCCCTTTGATCCTCCATTTGTTCGAGTGGTATTACCTGTTCTCT
CAGGAGGGTACGTCTTGGGTGGAGGAGCATTATGTATGGAACTTCTCACAAAACAGGGCTGGAG
CAGTGCCTATTCAATAGAATCAGTCATCATGCAAATAAATGCCACTTTAGTCAAAGGCAAGGCC
AGAGTGCAGTTTGGAGCAAATAAGAATCAATATAATCTAGCAAGAGCCCAACAGTCCTATAATT
CCATTGTACAGATACATGAGAAAAATGGCTGGTACACTCCTCCAAAGGAAGATGGCTAAATATG
TTGACTCTCATATGTTTGGACCAATGTTGCTTTAAAGAAAATCTTTCCAACATGCAGATACAAG
CTTTGAGTGCCCCTATAACAGCAGTACTGAAGATGTTAGCTAATAGATATTTTAGTGGATAATC
TGTCAACTGACATCGAGTATAAGTTACAGCCTTTTCATTTTGCTCACTTCAGTTATCTTGGACT
GAGCAGTGGGGCCTTTACTGTATTTTCCTGATAAATACACTTACTGGCCACTCCTTATCTTTTT
TTCTTGAAAAGTGAAATCTTTTAAGCAGGCAAGTCAGCATCAGGTTACTGTGGTTGCGACTTGG
CAGTAGCTTTCCTATACTGAGTTCATGGGTTTTGAGGATTTGCAATATACTGTTCCATTTAGAG
CCAATAAAAGTTTAATCAATGTTCAATTGGTTTAGAAAATTTTAAGCCTTCTAAACCACGGCCT
TTTAAGGTCTAAAACCATTTTATGATATTGCCAACTTAATGACAGGAAATTTACTCATTAAATT
GTTAAAAACTTTTTTATGGCTGTGTGAAGATATGAACTGTTTCATGAAGATATGCTCTTACTTG
AATTGTACGTTTTAGGCAAAGCAAAGTAAGGCAATGCCACTTAAGGCTTGTTGAGTAGTAATTT
CCACTGGGGCAGAAGAGTCTTGCTGGGCTGAATCGAATTGGTTTCTTTTGGTTCAATATTTCTT
ACAAAGAAGAGCCACAATATGGAGCTTGAAGTTATTTAAAATACTAAGTCATTTTACCTTTCCA
TTTTATTAACGGGATGTTGCAATGATTTGTAAACTAATAAACTTATAAAGTGATTGGCATGAAA
ACAGACTTCCTTGAGCAAAAAGCTATATAGTTAAGTACAAAAAGATACCTGATTTGGAGACTCT
TTGTTGTCATGACAATGGCTTTTACAACCAGAAGACTAATAGGAACTCATTATTCTTTTGTACA
ACCTGACTCAAATCAATGTACTCTCCATTTTACTGCCTTACACGAATCAGTCCTGTTTGGTTGG
TGAGAGATTTTTTTTTTTTTTAATAAACCCAAGTTTGATTTAAAAATAAATTCTAGTTATTAAG
CACTTTTTAAAAGAAACCCAGAAGCACATTTTTCTGCACAAACCAGTTACAAAGTTGAAACACA
TTTCTTATGCATTTGCTTTGATTGTTTTTAACTTTGTAAACCATATCTGAGAGATTTGACACTT
ATGCATTATTGTGTTTCTTTTGATTTTATTTTGGTTAGGACAGTAGATAAAGATCTTCTGGCAT
TCTTGCTCACTTTAAATTTATATAAAGCTCTGATTGCCAGCTGCTCAGATAACAAGTGACAAGG
CAGAATTCTTTAAAGCATTAAAGTTCCTTAAGCCTAAGGCTAAATCTTGAATACATTATTGAAT
TCTTTAATATCCTGATGGCTAGCAGATTGACAGCTGCACATTTGGCATGCTTTGTTTTTTGGAT
TTTATTTTTCATTGCAGATTTATTTGGCAATGTACAGTAAATTTTGTAAACTTGCATCAAGTTT
ATGAATAAAGAACCATTTAAAAATTA

hide sequence

RefSeq Acc Id:

XM_040275328 ⟹ XP_040131262

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	118,409,391 - 118,466,496 (-)	NCBI

RefSeq Acc Id:

XM_040275329 ⟹ XP_040131263

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	118,409,391 - 118,466,976 (-)	NCBI

RefSeq Acc Id:

XM_040275330 ⟹ XP_040131264

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	118,409,391 - 118,465,744 (-)	NCBI

RefSeq Acc Id:

XR_002484314

Type:

NON-CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	118,423,465 - 118,466,498 (-)	NCBI
SpeTri2.0	NW_004936471	36,271,528 - 36,314,558 (-)	NCBI

Sequence:

show sequence

CTTTCCCAGGCGGTAGCGGGGCGGCGACGCTCTTACCCTTTTAAGCCGCGGGGCCGCCGCCTCC
TGCCCGTGGGGTCGGTTACAAAGGGAGCAGCGGCTCGGGCGCCGCACAGCTGCCTGCTGAGGCC
TCGCGCCCCTCGCCATTTTCCAGCCGCGCTCCGACGCGGGTCGCGGCGGCGGGGAGAGGCGGAG
CCGCAAGAGCGCGGCCCGGGCCGGCCCCGCGGGGCGGTCGCGGCCGTGACGGCGGCTCCGGGCC
CAGCTCCCCTTCCGCACCCCTCCCGCCGGAGATGAGGGGAAGATGTCGGTGTCAGGGCTCAAGA
CCGAGCTGAAGTTCTTGGCGTCCATCTTCGACAAGAACCACGAGCGATTCCGCATCGTCAGCTG
GAAGCTGGACGAACTGCACTGCCAGTTCCTGGTGCCGCCGCCGGCGCCGCCGGGCAGCCCGCAC
TCACCGCAGCCGCCGCTCACACTCCACTGCAACATCACGGAATCTTACCCATCTTCTTCACCAA
TATGGTTTGTGGACTCTGATGACCCAACTCTGACATCGGTTCTGGAACGTCTAGAAGATACTAA
GAACAACAACACGCTTCGTCAGCAATTGAAGTGGTTGATATGTGAACTCTGCAGATTATATAAC
CTTCCTAAGCACCTGGATGTTGAGATGCTAGATCAACCACTACCCACGGGTCAGAATGGAACAA
CAGAAGAAGTGACTTCAGAAGAGGAGGAGGAAGAAGAGATGGCTGAAGATATAGAAGACTTGGA
TCATTATGAGATGAAGGAAGAAGAGCCTATTAATGGGAAAAAGTCAGAGGATGAAGGAATTGAA
AAAGAAAATTTGGCAATATTAGAAAAAATTAGGAAGACTCAAAGGCAAGACCATTTAAATGGTG
CGGTGTCTGGGTCAGTGCAAGCTTCAGATAGACTTATGAAAGAGCTCAGGGACATATACAGATC
ACAGAGTTATAAAACAGGGATTTATTCAGTGGAACTCATAAATGACAGTTTATATGACTGGCAT
GTTAAACTGCAGAAGGTTGACCCTGATAGTCCGTTGCACAGTGATCTTCAGATCTTAAAAGAAA
AAGAAGGCATAGAATATATTTTGCTTAACTTCTCTTTTAAGGTAGAACTTCAGGGAGGGGACGA
TCTGGGAGGTAAATGGCTGAAATTCTATTGGATTTGTGTTACTGGACCATGTCTTCTGACAGCA
GAAAGAAGGGCCTTTTCTAGGGTTGGAGTGTTTCTTAAGAGACCTGGGAAGAATGTGATTGTCC
TGAGCTAACTGACCTTATGAAGAGGACCTTAAACTGAATTGCCAAGTTATTAGTATCGGGATTC
ACAGACTTTGGAGGATAGCAGGATAACTTTCCCTTTGATCCTCCATTTGTTCGAGTGGTATTAC
CTGTTCTCTCAGGAGGGTAAGT

hide sequence

Protein Sequences


Protein RefSeqs	XP_005316900	(Get FASTA)	NCBI Sequence Viewer
	XP_005316902	(Get FASTA)	NCBI Sequence Viewer
	XP_040131262	(Get FASTA)	NCBI Sequence Viewer
	XP_040131263	(Get FASTA)	NCBI Sequence Viewer
	XP_040131264	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000002874.3
	ENSSTOP00000027538.1
GenBank Protein	KAG3262369	(Get FASTA)	NCBI Sequence Viewer
	KAG3262370	(Get FASTA)	NCBI Sequence Viewer
	KAG3262371	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005316902 ⟸ XM_005316845
- Peptide Label:	isoform X2
- UniProtKB:	A0A287D1V6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSVSGLKTELKFLASIFDKNHERFRIVSWKLDELHCQFLVPPPAPPGSPHSPQPPLTLHCNITE SYPSSSPIWFVDSDDPTLTSVLERLEDTKNNNTNGTTEEVTSEEEEEEEMAEDIEDLDHYEMKE EEPINGKKSEDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTG IYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVL PVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQ SYNSIVQIHEKNGWYTPPKEDG hide sequence

RefSeq Acc Id:	XP_005316900 ⟸ XM_005316843
- Peptide Label:	isoform X1
- UniProtKB:	I3M1V9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSVSGLKTELKFLASIFDKNHERFRIVSWKLDELHCQFLVPPPAPPGSPHSPQPPLTLHCNITE SYPSSSPIWFVDSDDPTLTSVLERLEDTKNNNTLRQQLKWLICELCRLYNLPKHLDVEMLDQPL PTGQNGTTEEVTSEEEEEEEMAEDIEDLDHYEMKEEEPINGKKSEDEGIEKENLAILEKIRKTQ RQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHS DLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYS IESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYNSIVQIHEKNGWYTPPKEDG hide sequence

RefSeq Acc Id:	XP_040131263 ⟸ XM_040275329
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_040131262 ⟸ XM_040275328
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_040131264 ⟸ XM_040275330
- Peptide Label:	isoform X4

RefSeq Acc Id:

ENSSTOP00000002874 ⟸ ENSSTOT00000003220

RefSeq Acc Id:

ENSSTOP00000027538 ⟸ ENSSTOT00000032636

Protein Domains

UBC core

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000003216	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000003220.3	UniProtKB/TrEMBL
	ENSSTOT00000032636.1	UniProtKB/TrEMBL
Gene3D-CATH	3.10.110.10	UniProtKB/TrEMBL
InterPro	RWD-domain	UniProtKB/TrEMBL
	UBQ-conjugat_E2	UniProtKB/TrEMBL
	UBQ-conjugating_enzyme/RWD	UniProtKB/TrEMBL
NCBI Gene	Ube2q2	ENTREZGENE
Pfam	RWD	UniProtKB/TrEMBL
	UQ_con	UniProtKB/TrEMBL
PROSITE	UBC_2	UniProtKB/TrEMBL
SMART	UBCc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54495	UniProtKB/TrEMBL
UniProt	A0A287D1V6	ENTREZGENE, UniProtKB/TrEMBL
	I3M1V9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar