Acsf3 (acyl-CoA synthetase family member 3)

Gene: Acsf3 (acyl-CoA synthetase family member 3) Ictidomys tridecemlineatus

Analyze

Symbol:

Acsf3

Name:

acyl-CoA synthetase family member 3

RGD ID:

12534897

Description:

ENCODES a protein that exhibits acid-thiol ligase activity (inferred); malonyl-CoA synthetase activity (inferred); medium-chain fatty acid-CoA ligase activity (inferred); INVOLVED IN fatty acid biosynthetic process (inferred); fatty acid metabolic process (inferred); malonate catabolic process (inferred); ASSOCIATED WITH 16Q24.3 Microdeletion Syndrome (ortholog); autosomal recessive chronic granulomatous disease 4 (ortholog); combined malonic and methylmalonic acidemia (ortholog); FOUND IN mitochondrion (inferred); nucleoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

acyl-CoA synthetase family member 3, mitochondrial; acyl-CoA synthetase family member 3, transcript variant X1; acyl-CoA synthetase family member 3, transcript variant X2; acyl-CoA synthetase family member 3, transcript variant X3; acyl-CoA synthetase family member 3, transcript variant X4; acyl-CoA synthetase family member 3, transcript variant X5; malonate--CoA ligase ACSF3, mitochondrial

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	24,946,656 - 24,983,470 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936641	700,187 - 736,941 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936641	700,218 - 736,875 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

16Q24.3 Microdeletion Syndrome (ISO)

autosomal recessive chronic granulomatous disease 4 (ISO)

combined malonic and methylmalonic acidemia (ISO)

Developmental Disabilities (ISO)

genetic disease (ISO)

KBG syndrome (ISO)

Malonic Aciduria (ISO)

methylmalonic acidemia (ISO)

primary ciliary dyskinesia 33 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

fatty acid biosynthetic process (IEA)

fatty acid metabolic process (IEA)

malonate catabolic process (IEA)

Cellular Component

mitochondrion (IEA)

nucleoplasm (IEA)

Molecular Function

acid-thiol ligase activity (IEA)

malonyl-CoA synthetase activity (IEA)

medium-chain fatty acid-CoA ligase activity (IEA)

protein binding (ISO)

very long-chain fatty acid-CoA ligase activity (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Acsf3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	24,946,656 - 24,983,470 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936641	700,187 - 736,941 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936641	700,218 - 736,875 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ACSF3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	89,093,852 - 89,156,233 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	89,088,375 - 89,164,121 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	89,160,260 - 89,222,641 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	87,687,825 - 87,749,670 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	16	74,226,564 - 74,287,794 (+)	NCBI		Celera
Cytogenetic Map	16	q24.3	NCBI
HuRef	16	74,859,689 - 74,921,455 (+)	NCBI		HuRef
CHM1_1	16	90,571,314 - 90,633,459 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	95,173,811 - 95,236,254 (+)	NCBI		T2T-CHM13v2.0

Acsf3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	123,502,209 - 123,544,626 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	123,502,225 - 123,544,619 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	122,775,470 - 122,817,887 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	122,775,486 - 122,817,880 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	125,299,405 - 125,341,781 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	125,666,626 - 125,703,971 (+)	NCBI		MGSCv36	mm8
Celera	8	127,007,875 - 127,052,230 (+)	NCBI		Celera
Cytogenetic Map	8	E1	NCBI
cM Map	8	71.97	NCBI

Acsf3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	67,743,660 - 67,784,109 (+)	NCBI		GRCr8
mRatBN7.2	19	50,835,116 - 50,875,557 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	50,835,221 - 50,875,553 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	19	55,594,801 - 55,635,312 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	55,594,831 - 55,635,122 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	66,302,623 - 66,342,436 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	53,066,291 - 53,106,673 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	19	50,073,106 - 50,113,121 (+)	NCBI		Celera
Cytogenetic Map	19	q12	NCBI

Acsf3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955541	2,837,448 - 2,876,316 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955541	2,837,487 - 2,876,220 (+)	NCBI	ChiLan1.0	ChiLan1.0

ACSF3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	98,874,350 - 98,940,718 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	104,790,399 - 104,854,970 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	69,842,709 - 69,907,075 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	89,465,691 - 89,524,210 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	89,467,997 - 89,523,825 (+)	Ensembl	panpan1.1		panPan2

ACSF3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	64,288,339 - 64,338,596 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	64,289,295 - 64,414,637 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	64,304,235 - 64,354,696 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	64,519,689 - 64,569,550 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	64,515,871 - 64,569,789 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	64,539,014 - 64,589,483 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	64,377,020 - 64,427,451 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	64,783,458 - 64,833,225 (-)	NCBI		UU_Cfam_GSD_1.0

ACSF3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	663,123 - 709,186 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	663,201 - 708,800 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	826,070 - 843,606 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ACSF3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	74,464,357 - 74,526,173 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	74,464,651 - 74,525,660 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	1,014,211 - 1,082,877 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Acsf3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624746	628,010 - 655,950 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624746	627,089 - 655,922 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005335419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021733356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021733357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021733358	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021733359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010004409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000028137 ⟹ ENSSTOP00000019206

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936641	700,187 - 736,941 (-)	Ensembl

RefSeq Acc Id:

XM_005335419 ⟹ XP_005335476

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	24,946,656 - 24,983,470 (-)	NCBI
SpeTri2.0	NW_004936641	700,218 - 736,875 (-)	NCBI

Sequence:

show sequence

GACTAGGTTCCGGCCAGACCTGTCGACCCGGTGGGACCTCAGAAGCCCCGCCCGACCCCGTGAC
CCCGTGACCCCGTGACCCCCGCCCGACCCCGCGAGCGCCGCAGAGCTGCTAGTCGTCACCGCCC
AGCGCAGGCCGTGACCCCTGGAGGATGCTCGTCAGTGCCCTGCTACGCTGCGAGAGGCTGCCCT
TCCCACGCCTGGCCTGGGCCTGGGCCTCCTCCTGGCCGACTCCCGGGAGACCCAGAGGAAGAGG
CCTGCTGCACACGCCCCCCACAGCCCCCCCGGACAGGACTGCCCCTGTGTTTACCCGTGCCCTG
GCCTTTGGGGACAGGCTTGCCCTGGTGGATCAGCATGGCCGCCACACCTACAGGGACCTTTATT
ACCGCAGCCTCCGCCTGTCTCGGGAGATCTGCAGGCTCTGTAACTGTGTGGATGGGGACCTCCG
GGAGGAGAGGGTGTCCTTCCTGTGCGCCAATGATGTCTCCTATGTCATTGCCCAGTGGGCCTCG
TGGATGAGTGGCGGCATCGCGGTCCCCCTGTTCCGGAAGCACCCGGAGGCCCAGCTGGAGTACT
TCATCCGGGACTCGCGGAGCTCTGTGGTTGTGGCCGGCCAGGAGTACATGGAGCTGCTGCGCCC
AGTGGTCAGACGGCTGGGGGTCCCGCTCCTGCCTCTGTCGCCTGCCATCTACCTTGAGGCAGCA
GAGGAGCCGGCAGAGGGGCAAGAGCAGGGGCAGGAGTGGGAGTGGGAGTGGCGGGACCGGGGCG
CCATGATCTTCTACACCAGTGGGACCACAGGGAGGCCCAAGGGTGCTCTGAGCACCCACCGCAA
CATAGCAGCCGTGGTTACTGGGCTGGTCCACGCTTGGGCATGGACCAGAGACGACGTGATCCTC
CACGTCCTCCCTCTGCACCATGTCCATGGCGTGGTCAACAAGCTGCTCTGTCCACTCTGGGTGG
GAGCCACCTGCGTCATGCTGCCTGAATTCAGTGCTCAGCAGGTCTGGGAGAAGTTCTTGAGCAC
TGAGACTCCCCGGATTAACATGTTTATGGCGGTGCCCACGATATACGCCAAGCTGCTGGATTAC
TATGACCAGCACTTCACCCAGCCTCACGTCCGGGACTTTGTGCGTGCCGTGTGTGAAGAAAACA
TCAGGCTGATGGTGTCAGGCTCGGCTGCCCTGCCCACCCCTGTGCTGGAGCAGTGGAAGCACGC
CACTGGCCACACACTGCTGGAGCGCTACGGCATGACTGAGATCGGCATGGCCCTGTCCAACCCG
CTGGCCGGAACTCGCCTGCCAGGTTCTGTGGGGACCCCGCTGCCGGGAGTGGAAGTGCGCATCG
TCTCGGAGGGCCTGCAGAAGGAGGGCTGCCCCCACGCCGTCCACGCGGAGGGAGACGAGAGCAG
GACAAAGGTGTCCCCGGGGTTTGAAGAGAAGGAAGGGGAGCTGCTGGTCAGGGGACCCTCTGTG
TTCCGAGAATACTGGGACAGACCAGAAGAGACAAGAAGTGCGTTCACCGCGGACGGCTGGTTTA
AGACAGGGGACACTGCTGTGTTCAAGGATGGCAAGTACTGGATCCGAGGCCGGACCTCAGTGGA
CATCATCAAGACCGGAGGCTACAAAGTCAGCGCCCTGGAGGTGGAGCGGCACCTGCTGGCCCAC
CCCAGCATCGCAGATGTGGCCGTGATTGGGATTCCAGATGTGACATGGGGCCAGCGGGTCACAG
CTGTGGTGACTCTTCGAGAAGGACACTCATTGTCCCTCAGGGACCTCAAGGAGTGGGCGAGAGG
CGTGCTGGCCCCCTACGCCATCCCCTCGGAGCTCCTGCTGGTGGAGGAGATCCCACGGAACCAG
ATGGGCAAGGTCAACAAGAAGGACCTGGTCGGGCAGTTCTACCCGTCGTGAGCAGAGGAGGCAG
CGGTGGGAGCTGGAGGACAAGAGGTGGCCCACGCCCACGGCCATCCCAGGCTCCCCAGTCCTCT
GTGTCCTTGTCCAAGGTGCAGCCTCGCAGTCCTAGCCCGCCCCCCCCCCCACCGCCGGGCTGCT
GGCCCTCTCCAGGGCAGGTCCCAGGAGGGTCCCGAGGTGCCCTAGGAGAAGAGGTGACGTGAGA
TGAACACCCGCCTGAGCTGTGTCACCACCTGCACCCAGCGCCTCCCCAGAGCCCCCAGCCGCCC
AGTGCCTCCGGGTGGAGCCTGCGTGCCCTGGGCCCCGGGCAGCCGCGCGCAGCTCTGGGACAGC
ACTCCGACCCTGCAACTCCTGCCACCGTGGGGCCTGCTGTGTGCCAGGAGGAAAATGCATTCCT
GAGGCCACAAGCGGCCATTCCGATGACGCTGCTCCTGCTTGGCCAGCTCAGCCTCCCTGGCCCC
CGCTGTCTCCTCCATCACTTCTCCTTCCCAGCCCACCTCTCCGCGTGCCCGTCCCCATGGGCAG
CTCTGAGCCCTGGGGCTCCTGGCGCAGGCCCTGCTCGCACCCACCACACTGGCTCCCGCTCCCC
GTGGCCTCCCGCTCCCCGTGGCCTGGACCCCATGCTCTGCTGCCCCTCGGGAGCCGCCTGCCCT
CCCAGGGGAATGTCCCCCGGAGGCCTGTGTGGACCTTCTTAGCAGCTGAGGAAATGCCTCTGCT
GGGGAGGCGGCTTAAGGGTGTGGGGTCCTCCCCCATCACCGAATTCACTGTCCAATGAGGAGGC
TCAGGTCCCTGGGAGTGCCCCTGCAGTCCCTGCTGCGTCCACAGTATGTGTCACACAGCCCCTC
AGCCACGAGGCTCTCCCCTGCCCTGGCCTCGCTCGGGCCCCTGCACAGGCCCCAAGGGAGCACG
TGGTCACCCCGCGCTGAGACGCAGACCCTCCTGCTAGGATAGCGCGACTGAGCGCCACGCAGCG
GCACAGCACCCACTGGCTAGAGGTGCTCACCCCCGCCACACCTGCTCTCCCAACCTGGGGCTGC
TGGCAGAGGGTCAGTGCCCCTGCCCACCCTGGCCGTCGGCGGGCAGCCTACTGCCATGGAGTAG
CACCAGGAGCAGGCTGGAGTTTACATGGTCACAGGAAGCGGCTCGGGCTGGGCTGGGCTCGGTG
GCAGAGCACTTGCCTGTCATGTGAGAGGCACTGGGTTCCATCCTCAGCACCATGTGAAAAATAA
AT

hide sequence

RefSeq Acc Id:

XM_021733356 ⟹ XP_021589031

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	24,946,656 - 24,982,156 (-)	NCBI
SpeTri2.0	NW_004936641	700,218 - 734,527 (-)	NCBI

Sequence:

show sequence

CCTCTGGTCTCCCTGACGGTGGGCGACGTGACTGGGAGGGTTCCAGTGACTGCGTCTGACTTAG
GGTTGAGTGGCTTAGAACACATCTGTAAAGCAGGGTTCAGCATGGCTGTCCTGTTCCCTGAACC
AGGGGTCGAGGGAGAATCCCAAGACGCCGAATGTTGTCTTCATGTCTAAACGCTGCTGTTGAAA
GTCCCCCACCACAGTTGGGGTGCTGCTCTGAGAGCCACAAGTCACTGCCAGGTGGAGGGGCAGA
GGCCAGGGCAGGAAGAAGCTGAGGAGCAAGGGACTTAGTGCCAGGGAGGGTGGCCAGCAGCACG
GGGACGGTTTCAGTGAATGGTGGCAAAGTCCAGGATCACGGCGTCCCTTGGCTTCCATATCAGC
TGTCTTCCATCTGAAGCCACATGGACAGGCGCTGGCCTCTCAGTGGGTCTGGAAAGAGGCGCAA
GTGCCTGTGGGAGGGTCCCAGGGCACCTCTTGAAGTGGGCAGTCCCACCCTGCCTCCCAGGGGC
TCGGTGCGGAGAGGCAGAAGGTGCTTCCAACCTGAAGAGACTGGCGCCTGCCGGCCAGGTGAAC
TTGCTTCCTTAAAGCCCTGCTCTGCCGTCAGCTCCCCACGCTGCCTTTGGGGTAGGCTGGAGAG
AGCCCCTGTGCCTGCCCTGAGCTGGAGGAGCCCCAGCCGTCCCATGGTGGCAGGGCTGCATGGC
CTCCCTGGCGTTTCTGAGGGCCACTGTCCTTAAGAGCCACCTTGTGTGTCGGGTCTCCCTGCTT
CTAGGCTGTCGCCTGGCTGTGTCACTGCTCAGAACCTGGTGTGGTTTAGAAAAACCCTCCACCG
CAGAGATGAAGTGGAAGGCCCAGGTGCTGGTGTCCGGGGGACTGCCTTCTGGCTGGAAGTCCAG
GGCCTCTGGGCGGGTCTTCAGAGATGTCCCCAGCTGTGCTGTGGCAAGGCTGTGTTGACGCTGT
GCCCCCCTCCAGCGCAGGCCGTGACCCCTGGAGGATGCTCGTCAGTGCCCTGCTACGCTGCGAG
AGGCTGCCCTTCCCACGCCTGGCCTGGGCCTGGGCCTCCTCCTGGCCGACTCCCGGGAGACCCA
GAGGAAGAGGCCTGCTGCACACGCCCCCCACAGCCCCCCCGGACAGGACTGCCCCTGTGTTTAC
CCGTGCCCTGGCCTTTGGGGACAGGCTTGCCCTGGTGGATCAGCATGGCCGCCACACCTACAGG
GACCTTTATTACCGCAGCCTCCGCCTGTCTCGGGAGATCTGCAGGCTCTGTAACTGTGTGGATG
GGGACCTCCGGGAGGAGAGGGTGTCCTTCCTGTGCGCCAATGATGTCTCCTATGTCATTGCCCA
GTGGGCCTCGTGGATGAGTGGCGGCATCGCGGTCCCCCTGTTCCGGAAGCACCCGGAGGCCCAG
CTGGAGTACTTCATCCGGGACTCGCGGAGCTCTGTGGTTGTGGCCGGCCAGGAGTACATGGAGC
TGCTGCGCCCAGTGGTCAGACGGCTGGGGGTCCCGCTCCTGCCTCTGTCGCCTGCCATCTACCT
TGAGGCAGCAGAGGAGCCGGCAGAGGGGCAAGAGCAGGGGCAGGAGTGGGAGTGGGAGTGGCGG
GACCGGGGCGCCATGATCTTCTACACCAGTGGGACCACAGGGAGGCCCAAGGGTGCTCTGAGCA
CCCACCGCAACATAGCAGCCGTGGTTACTGGGCTGGTCCACGCTTGGGCATGGACCAGAGACGA
CGTGATCCTCCACGTCCTCCCTCTGCACCATGTCCATGGCGTGGTCAACAAGCTGCTCTGTCCA
CTCTGGGTGGGAGCCACCTGCGTCATGCTGCCTGAATTCAGTGCTCAGCAGGTCTGGGAGAAGT
TCTTGAGCACTGAGACTCCCCGGATTAACATGTTTATGGCGGTGCCCACGATATACGCCAAGCT
GCTGGATTACTATGACCAGCACTTCACCCAGCCTCACGTCCGGGACTTTGTGCGTGCCGTGTGT
GAAGAAAACATCAGGCTGATGGTGTCAGGCTCGGCTGCCCTGCCCACCCCTGTGCTGGAGCAGT
GGAAGCACGCCACTGGCCACACACTGCTGGAGCGCTACGGCATGACTGAGATCGGCATGGCCCT
GTCCAACCCGCTGGCCGGAACTCGCCTGCCAGGTTCTGTGGGGACCCCGCTGCCGGGAGTGGAA
GTGCGCATCGTCTCGGAGGGCCTGCAGAAGGAGGGCTGCCCCCACGCCGTCCACGCGGAGGGAG
ACGAGAGCAGGACAAAGGTGTCCCCGGGGTTTGAAGAGAAGGAAGGGGAGCTGCTGGTCAGGGG
ACCCTCTGTGTTCCGAGAATACTGGGACAGACCAGAAGAGACAAGAAGTGCGTTCACCGCGGAC
GGCTGGTTTAAGACAGGGGACACTGCTGTGTTCAAGGATGGCAAGTACTGGATCCGAGGCCGGA
CCTCAGTGGACATCATCAAGACCGGAGGCTACAAAGTCAGCGCCCTGGAGGTGGAGCGGCACCT
GCTGGCCCACCCCAGCATCGCAGATGTGGCCGTGATTGGGATTCCAGATGTGACATGGGGCCAG
CGGGTCACAGCTGTGGTGACTCTTCGAGAAGGACACTCATTGTCCCTCAGGGACCTCAAGGAGT
GGGCGAGAGGCGTGCTGGCCCCCTACGCCATCCCCTCGGAGCTCCTGCTGGTGGAGGAGATCCC
ACGGAACCAGATGGGCAAGGTCAACAAGAAGGACCTGGTCGGGCAGTTCTACCCGTCGTGAGCA
GAGGAGGCAGCGGTGGGAGCTGGAGGACAAGAGGTGGCCCACGCCCACGGCCATCCCAGGCTCC
CCAGTCCTCTGTGTCCTTGTCCAAGGTGCAGCCTCGCAGTCCTAGCCCGCCCCCCCCCCCACCG
CCGGGCTGCTGGCCCTCTCCAGGGCAGGTCCCAGGAGGGTCCCGAGGTGCCCTAGGAGAAGAGG
TGACGTGAGATGAACACCCGCCTGAGCTGTGTCACCACCTGCACCCAGCGCCTCCCCAGAGCCC
CCAGCCGCCCAGTGCCTCCGGGTGGAGCCTGCGTGCCCTGGGCCCCGGGCAGCCGCGCGCAGCT
CTGGGACAGCACTCCGACCCTGCAACTCCTGCCACCGTGGGGCCTGCTGTGTGCCAGGAGGAAA
ATGCATTCCTGAGGCCACAAGCGGCCATTCCGATGACGCTGCTCCTGCTTGGCCAGCTCAGCCT
CCCTGGCCCCCGCTGTCTCCTCCATCACTTCTCCTTCCCAGCCCACCTCTCCGCGTGCCCGTCC
CCATGGGCAGCTCTGAGCCCTGGGGCTCCTGGCGCAGGCCCTGCTCGCACCCACCACACTGGCT
CCCGCTCCCCGTGGCCTCCCGCTCCCCGTGGCCTGGACCCCATGCTCTGCTGCCCCTCGGGAGC
CGCCTGCCCTCCCAGGGGAATGTCCCCCGGAGGCCTGTGTGGACCTTCTTAGCAGCTGAGGAAA
TGCCTCTGCTGGGGAGGCGGCTTAAGGGTGTGGGGTCCTCCCCCATCACCGAATTCACTGTCCA
ATGAGGAGGCTCAGGTCCCTGGGAGTGCCCCTGCAGTCCCTGCTGCGTCCACAGTATGTGTCAC
ACAGCCCCTCAGCCACGAGGCTCTCCCCTGCCCTGGCCTCGCTCGGGCCCCTGCACAGGCCCCA
AGGGAGCACGTGGTCACCCCGCGCTGAGACGCAGACCCTCCTGCTAGGATAGCGCGACTGAGCG
CCACGCAGCGGCACAGCACCCACTGGCTAGAGGTGCTCACCCCCGCCACACCTGCTCTCCCAAC
CTGGGGCTGCTGGCAGAGGGTCAGTGCCCCTGCCCACCCTGGCCGTCGGCGGGCAGCCTACTGC
CATGGAGTAGCACCAGGAGCAGGCTGGAGTTTACATGGTCACAGGAAGCGGCTCGGGCTGGGCT
GGGCTCGGTGGCAGAGCACTTGCCTGTCATGTGAGAGGCACTGGGTTCCATCCTCAGCACCATG
TGAAAAATAAAT

hide sequence

RefSeq Acc Id:

XM_021733357 ⟹ XP_021589032

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	24,946,656 - 24,982,144 (-)	NCBI
SpeTri2.0	NW_004936641	700,218 - 734,518 (-)	NCBI

Sequence:

show sequence

TCCCTGACGGTGGGCGACGTGACTGGGAGGGTTCCAGTGACTGCGTCTGACTTAGGGTTGAGTG
GCTTAGAACACATCTGTAAAGCAGGGTTCAGCATGGCTGTCCTGTTCCCTGAACCAGGGGTCGA
GGGAGAATCCCAAGACGCCGAATGTTGTCTTCATGTCTAAACGCTGCTGTTGAAAGTCCCCCAC
CACAGTTGGGGTGCTGCTCTGAGAGCCACAAGTCACTGCCAGGTGGAGGGGCAGAGGCCAGGGC
AGGAAGAAGCTGAGGAGCAAGGGACTTAGTGCCAGGGAGGGTGGCCAGCAGCACGGGGACGGTT
TCAGTGAATGGTGGCAAAGTCCAGGATCACGGCGTCCCTTGGCTTCCATATCAGCTGTCTTCCA
TCTGAAGCCACATGGACAGGCGCTGGCCTCTCAGTGGGTCTGGAAAGAGGCGCAAGTGCCTGTG
GGAGGGTCCCAGGGCACCTCTTGAAGTGGGCAGTCCCACCCTGCCTCCCAGGGGCTCGGTGCGG
AGAGGCAGAAGGTGCTTCCAACCTGAAGAGACTGGCGCCTGCCGGCCAGGTGAACTTGCTTCCT
TAAAGCCCTGCTCTGCCGTCAGCTCCCCACGCTGCCTTTGGGGTAGGCTGGAGAGAGCCCCTGT
GCCTGCCCTGAGCTGGAGGAGCCCCAGCCGTCCCATGGTGGCAGGGCTGCATGGCCTCCCTGGC
GTTTCTGAGGGCCACTGTCCTTAAGAGCCACCTTGTGTGTCGGGTCTCCCTGCTTCTAGGCTGT
CGCCTGGCTGTGTCACTGCTCAGAACCTGGTGTGGTTTAGAAAAACCCTCCACCGCAGAGATGA
AGTGGAAGGCCCAGGTGCTGGTGTCCGGGGGACTGCCTTCTGGCTGGAAGTCCAGGGCCTCTGG
GCGGGTCTTCAGAGATGTCCCCAGCTGTGCTGTGGCAAGGCTGTGTTGACGCTGTGCCCCCCTC
CAGCGCAGGCCGTGACCCCTGGAGGATGCTCGTCAGTGCCCTGCTACGCTGCGAGAGGCTGCCC
TTCCCACGCCTGGCCTGGGCCTGGGCCTCCTCCTGGCCGACTCCCGGGAGACCCAGAGGAAGAG
GCCTGCTGCACACGCCCCCCACAGCCCCCCCGGACAGGACTGCCCCTGTGTTTACCCGTGCCCT
GGCCTTTGGGGACAGGCTTGCCCTGGTGGATCAGCATGGCCGCCACACCTACAGGGACCTTTAT
TACCGCAGCCTCCGCCTGTCTCGGGAGATCTGCAGGCTCTGTAACTGTGTGGATGGGGACCTCC
GGGAGGAGAGGGTGTCCTTCCTGTGCGCCAATGATGTCTCCTATGTCATTGCCCAGTGGGCCTC
GTGGATGAGTGGCGGCATCGCGGTCCCCCTGTTCCGGAAGCACCCGGAGGCCCAGCTGGAGTAC
TTCATCCGGGACTCGCGGAGCTCTGTGGTTGTGGCCGGCCAGGAGTACATGGAGCTGCTGCGCC
CAGTGGTCAGACGGCTGGGGGTCCCGCTCCTGCCTCTGTCGCCTGCCATCTACCTTGAGGCAGC
AGAGGAGCCGGCAGAGGGGCAAGAGCAGGGGCAGGAGTGGGAGTGGGAGTGGCGGGACCGGGGC
GCCATGATCTTCTACACCAGTGGGACCACAGGGAGGCCCAAGGGTGCTCTGAGCACCCACCGCA
ACATAGCAGCCGTGGTTACTGGGCTGGTCCACGCTTGGGCATGGACCAGAGACGACGTGATCCT
CCACGTCCTCCCTCTGCACCATGTCCATGGCGTGGTCAACAAGCTGCTCTGTCCACTCTGGGTG
GGAGCCACCTGCGTCATGCTGCCTGAATTCAGTGCTCAGCAGGTCTGGGAGAAGTTCTTGAGCA
CTGAGACTCCCCGGATTAACATGTTTATGGCGGTGCCCACGATATACGCCAAGCTGCTGGATTA
CTATGACCAGCACTTCACCCAGCCTCACGTCCGGGACTTTGTGCGTGCCGTGTGTGAAGAAAAC
ATCAGGCTGATGGTGTCAGGCTCGGCTGCCCTGCCCACCCCTGTGCTGGAGCAGTGGAAGCACG
CCACTGGCCACACACTGCTGGAGCGCTACGGCATGACTGAGATCGGCATGGCCCTGTCCAACCC
GCTGGCCGGAACTCGCCTGCCAGGTTCTGTGGGGACCCCGCTGCCGGGAGTGGAAGTGCGCATC
GTCTCGGAGGGCCTGCAGAAGGAGGGCTGCCCCCACGCCGTCCACGCGGAGGGAGACGAGAGCA
GGACAAAGGTGTCCCCGGGGTTTGAAGAGAAGGAAGGGGAGCTGCTGGTCAGGGGACCCTCTGT
GTTCCGAGAATACTGGGACAGACCAGAAGAGACAAGAAGTGCGTTCACCGCGGACGGCTGGTTT
AAGACAGGGGACACTGCTGTGTTCAAGGATGGCAAGTACTGGATCCGAGGCCGGACCTCAGTGG
ACATCATCAAGACCGGAGGCTACAAAGTCAGCGCCCTGGAGGTGGAGCGGCACCTGCTGGCCCA
CCCCAGCATCGCAGAGGCGTGCTGGCCCCCTACGCCATCCCCTCGGAGCTCCTGCTGGTGGAGG
AGATCCCACGGAACCAGATGGGCAAGGTCAACAAGAAGGACCTGGTCGGGCAGTTCTACCCGTC
GTGAGCAGAGGAGGCAGCGGTGGGAGCTGGAGGACAAGAGGTGGCCCACGCCCACGGCCATCCC
AGGCTCCCCAGTCCTCTGTGTCCTTGTCCAAGGTGCAGCCTCGCAGTCCTAGCCCGCCCCCCCC
CCCACCGCCGGGCTGCTGGCCCTCTCCAGGGCAGGTCCCAGGAGGGTCCCGAGGTGCCCTAGGA
GAAGAGGTGACGTGAGATGAACACCCGCCTGAGCTGTGTCACCACCTGCACCCAGCGCCTCCCC
AGAGCCCCCAGCCGCCCAGTGCCTCCGGGTGGAGCCTGCGTGCCCTGGGCCCCGGGCAGCCGCG
CGCAGCTCTGGGACAGCACTCCGACCCTGCAACTCCTGCCACCGTGGGGCCTGCTGTGTGCCAG
GAGGAAAATGCATTCCTGAGGCCACAAGCGGCCATTCCGATGACGCTGCTCCTGCTTGGCCAGC
TCAGCCTCCCTGGCCCCCGCTGTCTCCTCCATCACTTCTCCTTCCCAGCCCACCTCTCCGCGTG
CCCGTCCCCATGGGCAGCTCTGAGCCCTGGGGCTCCTGGCGCAGGCCCTGCTCGCACCCACCAC
ACTGGCTCCCGCTCCCCGTGGCCTCCCGCTCCCCGTGGCCTGGACCCCATGCTCTGCTGCCCCT
CGGGAGCCGCCTGCCCTCCCAGGGGAATGTCCCCCGGAGGCCTGTGTGGACCTTCTTAGCAGCT
GAGGAAATGCCTCTGCTGGGGAGGCGGCTTAAGGGTGTGGGGTCCTCCCCCATCACCGAATTCA
CTGTCCAATGAGGAGGCTCAGGTCCCTGGGAGTGCCCCTGCAGTCCCTGCTGCGTCCACAGTAT
GTGTCACACAGCCCCTCAGCCACGAGGCTCTCCCCTGCCCTGGCCTCGCTCGGGCCCCTGCACA
GGCCCCAAGGGAGCACGTGGTCACCCCGCGCTGAGACGCAGACCCTCCTGCTAGGATAGCGCGA
CTGAGCGCCACGCAGCGGCACAGCACCCACTGGCTAGAGGTGCTCACCCCCGCCACACCTGCTC
TCCCAACCTGGGGCTGCTGGCAGAGGGTCAGTGCCCCTGCCCACCCTGGCCGTCGGCGGGCAGC
CTACTGCCATGGAGTAGCACCAGGAGCAGGCTGGAGTTTACATGGTCACAGGAAGCGGCTCGGG
CTGGGCTGGGCTCGGTGGCAGAGCACTTGCCTGTCATGTGAGAGGCACTGGGTTCCATCCTCAG
CACCATGTGAAAAATAAAT

hide sequence

RefSeq Acc Id:

XM_021733358 ⟹ XP_021589033

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	24,946,656 - 24,982,154 (-)	NCBI
SpeTri2.0	NW_004936641	700,218 - 734,531 (-)	NCBI

Sequence:

show sequence

TGGGCCTCTGGTCTCCCTGACGGTGGGCGACGTGACTGGGAGGGTTCCAGTGACTGCGTCTGAC
TTAGGGTTGAGTGGCTTAGAACACATCTGTAAAGCAGGGTTCAGCATGGCTGTCCTGTTCCCTG
AACCAGGGGTCGAGGGAGAATCCCAAGACGCCGAATGTTGTCTTCATGTCTAAACGCTGCTGTT
GAAAGTCCCCCACCACAGTTGGGGTGCTGCTCTGAGAGCCACAAGTCACTGCCAGGTGGAGGGG
CAGAGGCCAGGGCAGGAAGAAGCTGAGGAGCAAGGGACTTAGTGCCAGGGAGGGTGGCCAGCAG
CACGGGGACGGTTTCAGTGAATGGTGGCAAAGTCCAGGATCACGGCGTCCCTTGGCTTCCATAT
CAGCTGTCTTCCATCTGAAGCCACATGGACAGGCGCTGGCCTCTCAGTGGGTCTGGAAAGAGGC
GCAAGTGCCTGTGGGAGGGTCCCAGGGCACCTCTTGAAGTGGGCAGTCCCACCCTGCCTCCCAG
GGGCTCGGTGCGGAGAGGCAGAAGGTGCTTCCAACCTGAAGAGACTGGCGCCTGCCGGCCAGGT
GAACTTGCTTCCTTAAAGCCCTGCTCTGCCGTCAGCTCCCCACGCTGCCTTTGGGGTAGGCTGG
AGAGAGCCCCTGTGCCTGCCCTGAGCTGGAGGAGCCCCAGCCGTCCCATGGTGGCAGGGCTGCA
TGGCCTCCCTGGCGTTTCTGAGGGCCACTGTCCTTAAGAGCCACCTTGTGTGTCGGGTCTCCCT
GCTTCTAGGCTGTCGCCTGGCTGTGTCACTGCTCAGAACCTGGTGTGGTTTAGAAAAACCCTCC
ACCGCAGAGATGAAGTGGAAGGCCCAGGTGCTGGTGTCCGGGGGACTGCCTTCTGGCTGGAAGT
CCAGGGCCTCTGGGCGGGTCTTCAGAGATGTCCCCAGCTGTGCTGTGGCAAGGCTGTGTTGACG
CTGTGCCCCCCTCCAGCGCAGGCCGTGACCCCTGGAGGATGCTCGTCAGTGCCCTGCTACGCTG
CGAGAGGCTGCCCTTCCCACGCCTGGCCTGGGCCTGGGCCTCCTCCTGGCCGACTCCCGGGAGA
CCCAGAGGAAGAGGCCTGCTGCACACGCCCCCCACAGCCCCCCCGGACAGGACTGCCCCTGTGT
TTACCCGTGCCCTGGCCTTTGGGGACAGGCTTGCCCTGGTGGATCAGCATGGCCGCCACACCTA
CAGGGACCTTTATTACCGCAGCCTCCGCCTGTCTCGGGAGATCTGCAGGCTCTGTAACTGTGTG
GATGGGGACCTCCGGGAGGAGAGGGTGTCCTTCCTGTGCGCCAATGATGTCTCCTATGTCATTG
CCCAGTGGGCCTCGTGGATGAGTGGCGGCATCGCGGTCCCCCTGTTCCGGAAGCACCCGGAGGC
CCAGCTGGAGTACTTCATCCGGGACTCGCGGAGCTCTGTGGTTGTGGCCGGCCAGGAGTACATG
GAGCTGCTGCGCCCAGTGGTCAGACGGCTGGGGGTCCCGCTCCTGCCTCTGTCGCCTGCCATCT
ACCTTGAGGCAGCAGAGGAGCCGGCAGAGGGGCAAGAGCAGGGGCAGGAGTGGGAGTGGGAGTG
GCGGGACCGGGGCGCCATGATCTTCTACACCAGTGGGACCACAGGGAGGCCCAAGGGTGCTCTG
AGCACCCACCGCAACATAGCAGCCGTGGTCTGGGAGAAGTTCTTGAGCACTGAGACTCCCCGGA
TTAACATGTTTATGGCGGTGCCCACGATATACGCCAAGCTGCTGGATTACTATGACCAGCACTT
CACCCAGCCTCACGTCCGGGACTTTGTGCGTGCCGTGTGTGAAGAAAACATCAGGCTGATGGTG
TCAGGCTCGGCTGCCCTGCCCACCCCTGTGCTGGAGCAGTGGAAGCACGCCACTGGCCACACAC
TGCTGGAGCGCTACGGCATGACTGAGATCGGCATGGCCCTGTCCAACCCGCTGGCCGGAACTCG
CCTGCCAGGTTCTGTGGGGACCCCGCTGCCGGGAGTGGAAGTGCGCATCGTCTCGGAGGGCCTG
CAGAAGGAGGGCTGCCCCCACGCCGTCCACGCGGAGGGAGACGAGAGCAGGACAAAGGTGTCCC
CGGGGTTTGAAGAGAAGGAAGGGGAGCTGCTGGTCAGGGGACCCTCTGTGTTCCGAGAATACTG
GGACAGACCAGAAGAGACAAGAAGTGCGTTCACCGCGGACGGCTGGTTTAAGACAGGGGACACT
GCTGTGTTCAAGGATGGCAAGTACTGGATCCGAGGCCGGACCTCAGTGGACATCATCAAGACCG
GAGGCTACAAAGTCAGCGCCCTGGAGGTGGAGCGGCACCTGCTGGCCCACCCCAGCATCGCAGA
TGTGGCCGTGATTGGGATTCCAGATGTGACATGGGGCCAGCGGGTCACAGCTGTGGTGACTCTT
CGAGAAGGACACTCATTGTCCCTCAGGGACCTCAAGGAGTGGGCGAGAGGCGTGCTGGCCCCCT
ACGCCATCCCCTCGGAGCTCCTGCTGGTGGAGGAGATCCCACGGAACCAGATGGGCAAGGTCAA
CAAGAAGGACCTGGTCGGGCAGTTCTACCCGTCGTGAGCAGAGGAGGCAGCGGTGGGAGCTGGA
GGACAAGAGGTGGCCCACGCCCACGGCCATCCCAGGCTCCCCAGTCCTCTGTGTCCTTGTCCAA
GGTGCAGCCTCGCAGTCCTAGCCCGCCCCCCCCCCCACCGCCGGGCTGCTGGCCCTCTCCAGGG
CAGGTCCCAGGAGGGTCCCGAGGTGCCCTAGGAGAAGAGGTGACGTGAGATGAACACCCGCCTG
AGCTGTGTCACCACCTGCACCCAGCGCCTCCCCAGAGCCCCCAGCCGCCCAGTGCCTCCGGGTG
GAGCCTGCGTGCCCTGGGCCCCGGGCAGCCGCGCGCAGCTCTGGGACAGCACTCCGACCCTGCA
ACTCCTGCCACCGTGGGGCCTGCTGTGTGCCAGGAGGAAAATGCATTCCTGAGGCCACAAGCGG
CCATTCCGATGACGCTGCTCCTGCTTGGCCAGCTCAGCCTCCCTGGCCCCCGCTGTCTCCTCCA
TCACTTCTCCTTCCCAGCCCACCTCTCCGCGTGCCCGTCCCCATGGGCAGCTCTGAGCCCTGGG
GCTCCTGGCGCAGGCCCTGCTCGCACCCACCACACTGGCTCCCGCTCCCCGTGGCCTCCCGCTC
CCCGTGGCCTGGACCCCATGCTCTGCTGCCCCTCGGGAGCCGCCTGCCCTCCCAGGGGAATGTC
CCCCGGAGGCCTGTGTGGACCTTCTTAGCAGCTGAGGAAATGCCTCTGCTGGGGAGGCGGCTTA
AGGGTGTGGGGTCCTCCCCCATCACCGAATTCACTGTCCAATGAGGAGGCTCAGGTCCCTGGGA
GTGCCCCTGCAGTCCCTGCTGCGTCCACAGTATGTGTCACACAGCCCCTCAGCCACGAGGCTCT
CCCCTGCCCTGGCCTCGCTCGGGCCCCTGCACAGGCCCCAAGGGAGCACGTGGTCACCCCGCGC
TGAGACGCAGACCCTCCTGCTAGGATAGCGCGACTGAGCGCCACGCAGCGGCACAGCACCCACT
GGCTAGAGGTGCTCACCCCCGCCACACCTGCTCTCCCAACCTGGGGCTGCTGGCAGAGGGTCAG
TGCCCCTGCCCACCCTGGCCGTCGGCGGGCAGCCTACTGCCATGGAGTAGCACCAGGAGCAGGC
TGGAGTTTACATGGTCACAGGAAGCGGCTCGGGCTGGGCTGGGCTCGGTGGCAGAGCACTTGCC
TGTCATGTGAGAGGCACTGGGTTCCATCCTCAGCACCATGTGAAAAATAAAT

hide sequence

RefSeq Acc Id:

XM_021733359 ⟹ XP_021589034

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	24,946,656 - 24,983,379 (-)	NCBI
SpeTri2.0	NW_004936641	700,218 - 736,857 (-)	NCBI

Sequence:

show sequence

CCTGTCGACCCGGTGGGACCTCAGAAGCCCCGCCCGACCCCGTGACCCCGTGACCCCGTGACCC
CCGCCCGACCCCGCGAGCGCCGCAGAGCTGCTAGTCGTCACCGCCCAGGTTACTGGGCTGGTCC
ACGCTTGGGCATGGACCAGAGACGACGTGATCCTCCACGTCCTCCCTCTGCACCATGTCCATGG
CGTGGTCAACAAGCTGCTCTGTCCACTCTGGGTGGGAGCCACCTGCGTCATGCTGCCTGAATTC
AGTGCTCAGCAGGTCTGGGAGAAGTTCTTGAGCACTGAGACTCCCCGGATTAACATGTTTATGG
CGGTGCCCACGATATACGCCAAGCTGCTGGATTACTATGACCAGCACTTCACCCAGCCTCACGT
CCGGGACTTTGTGCGTGCCGTGTGTGAAGAAAACATCAGGCTGATGGTGTCAGGCTCGGCTGCC
CTGCCCACCCCTGTGCTGGAGCAGTGGAAGCACGCCACTGGCCACACACTGCTGGAGCGCTACG
GCATGACTGAGATCGGCATGGCCCTGTCCAACCCGCTGGCCGGAACTCGCCTGCCAGGTTCTGT
GGGGACCCCGCTGCCGGGAGTGGAAGTGCGCATCGTCTCGGAGGGCCTGCAGAAGGAGGGCTGC
CCCCACGCCGTCCACGCGGAGGGAGACGAGAGCAGGACAAAGGTGTCCCCGGGGTTTGAAGAGA
AGGAAGGGGAGCTGCTGGTCAGGGGACCCTCTGTGTTCCGAGAATACTGGGACAGACCAGAAGA
GACAAGAAGTGCGTTCACCGCGGACGGCTGGTTTAAGACAGGGGACACTGCTGTGTTCAAGGAT
GGCAAGTACTGGATCCGAGGCCGGACCTCAGTGGACATCATCAAGACCGGAGGCTACAAAGTCA
GCGCCCTGGAGGTGGAGCGGCACCTGCTGGCCCACCCCAGCATCGCAGATGTGGCCGTGATTGG
GATTCCAGATGTGACATGGGGCCAGCGGGTCACAGCTGTGGTGACTCTTCGAGAAGGACACTCA
TTGTCCCTCAGGGACCTCAAGGAGTGGGCGAGAGGCGTGCTGGCCCCCTACGCCATCCCCTCGG
AGCTCCTGCTGGTGGAGGAGATCCCACGGAACCAGATGGGCAAGGTCAACAAGAAGGACCTGGT
CGGGCAGTTCTACCCGTCGTGAGCAGAGGAGGCAGCGGTGGGAGCTGGAGGACAAGAGGTGGCC
CACGCCCACGGCCATCCCAGGCTCCCCAGTCCTCTGTGTCCTTGTCCAAGGTGCAGCCTCGCAG
TCCTAGCCCGCCCCCCCCCCCACCGCCGGGCTGCTGGCCCTCTCCAGGGCAGGTCCCAGGAGGG
TCCCGAGGTGCCCTAGGAGAAGAGGTGACGTGAGATGAACACCCGCCTGAGCTGTGTCACCACC
TGCACCCAGCGCCTCCCCAGAGCCCCCAGCCGCCCAGTGCCTCCGGGTGGAGCCTGCGTGCCCT
GGGCCCCGGGCAGCCGCGCGCAGCTCTGGGACAGCACTCCGACCCTGCAACTCCTGCCACCGTG
GGGCCTGCTGTGTGCCAGGAGGAAAATGCATTCCTGAGGCCACAAGCGGCCATTCCGATGACGC
TGCTCCTGCTTGGCCAGCTCAGCCTCCCTGGCCCCCGCTGTCTCCTCCATCACTTCTCCTTCCC
AGCCCACCTCTCCGCGTGCCCGTCCCCATGGGCAGCTCTGAGCCCTGGGGCTCCTGGCGCAGGC
CCTGCTCGCACCCACCACACTGGCTCCCGCTCCCCGTGGCCTCCCGCTCCCCGTGGCCTGGACC
CCATGCTCTGCTGCCCCTCGGGAGCCGCCTGCCCTCCCAGGGGAATGTCCCCCGGAGGCCTGTG
TGGACCTTCTTAGCAGCTGAGGAAATGCCTCTGCTGGGGAGGCGGCTTAAGGGTGTGGGGTCCT
CCCCCATCACCGAATTCACTGTCCAATGAGGAGGCTCAGGTCCCTGGGAGTGCCCCTGCAGTCC
CTGCTGCGTCCACAGTATGTGTCACACAGCCCCTCAGCCACGAGGCTCTCCCCTGCCCTGGCCT
CGCTCGGGCCCCTGCACAGGCCCCAAGGGAGCACGTGGTCACCCCGCGCTGAGACGCAGACCCT
CCTGCTAGGATAGCGCGACTGAGCGCCACGCAGCGGCACAGCACCCACTGGCTAGAGGTGCTCA
CCCCCGCCACACCTGCTCTCCCAACCTGGGGCTGCTGGCAGAGGGTCAGTGCCCCTGCCCACCC
TGGCCGTCGGCGGGCAGCCTACTGCCATGGAGTAGCACCAGGAGCAGGCTGGAGTTTACATGGT
CACAGGAAGCGGCTCGGGCTGGGCTGGGCTCGGTGGCAGAGCACTTGCCTGTCATGTGAGAGGC
ACTGGGTTCCATCCTCAGCACCATGTGAAAAATAAAT

hide sequence

Protein Sequences


Protein RefSeqs	XP_005335476	(Get FASTA)	NCBI Sequence Viewer
	XP_021589031	(Get FASTA)	NCBI Sequence Viewer
	XP_021589032	(Get FASTA)	NCBI Sequence Viewer
	XP_021589033	(Get FASTA)	NCBI Sequence Viewer
	XP_021589034	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000019206.2
GenBank Protein	KAG3256682	(Get FASTA)	NCBI Sequence Viewer
	KAG3256683	(Get FASTA)	NCBI Sequence Viewer
	KAG3256684	(Get FASTA)	NCBI Sequence Viewer
	KAG3256685	(Get FASTA)	NCBI Sequence Viewer
	KAG3256686	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005335476 ⟸ XM_005335419
- Peptide Label:	isoform X3
- UniProtKB:	I3N4B0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLVSALLRCERLPFPRLAWAWASSWPTPGRPRGRGLLHTPPTAPPDRTAPVFTRALAFGDRLAL VDQHGRHTYRDLYYRSLRLSREICRLCNCVDGDLREERVSFLCANDVSYVIAQWASWMSGGIAV PLFRKHPEAQLEYFIRDSRSSVVVAGQEYMELLRPVVRRLGVPLLPLSPAIYLEAAEEPAEGQE QGQEWEWEWRDRGAMIFYTSGTTGRPKGALSTHRNIAAVVTGLVHAWAWTRDDVILHVLPLHHV HGVVNKLLCPLWVGATCVMLPEFSAQQVWEKFLSTETPRINMFMAVPTIYAKLLDYYDQHFTQP HVRDFVRAVCEENIRLMVSGSAALPTPVLEQWKHATGHTLLERYGMTEIGMALSNPLAGTRLPG SVGTPLPGVEVRIVSEGLQKEGCPHAVHAEGDESRTKVSPGFEEKEGELLVRGPSVFREYWDRP EETRSAFTADGWFKTGDTAVFKDGKYWIRGRTSVDIIKTGGYKVSALEVERHLLAHPSIADVAV IGIPDVTWGQRVTAVVTLREGHSLSLRDLKEWARGVLAPYAIPSELLLVEEIPRNQMGKVNKKD LVGQFYPS hide sequence

RefSeq Acc Id:

XP_021589034 ⟸ XM_021733359

- Peptide Label:

isoform X5

- Sequence:

show sequence

MLPEFSAQQVWEKFLSTETPRINMFMAVPTIYAKLLDYYDQHFTQPHVRDFVRAVCEENIRLMV
SGSAALPTPVLEQWKHATGHTLLERYGMTEIGMALSNPLAGTRLPGSVGTPLPGVEVRIVSEGL
QKEGCPHAVHAEGDESRTKVSPGFEEKEGELLVRGPSVFREYWDRPEETRSAFTADGWFKTGDT
AVFKDGKYWIRGRTSVDIIKTGGYKVSALEVERHLLAHPSIADVAVIGIPDVTWGQRVTAVVTL
REGHSLSLRDLKEWARGVLAPYAIPSELLLVEEIPRNQMGKVNKKDLVGQFYPS

hide sequence

RefSeq Acc Id:

XP_021589033 ⟸ XM_021733358

- Peptide Label:

isoform X4

- Sequence:

show sequence

MSPAVLWQGCVDAVPPSSAGRDPWRMLVSALLRCERLPFPRLAWAWASSWPTPGRPRGRGLLHT
PPTAPPDRTAPVFTRALAFGDRLALVDQHGRHTYRDLYYRSLRLSREICRLCNCVDGDLREERV
SFLCANDVSYVIAQWASWMSGGIAVPLFRKHPEAQLEYFIRDSRSSVVVAGQEYMELLRPVVRR
LGVPLLPLSPAIYLEAAEEPAEGQEQGQEWEWEWRDRGAMIFYTSGTTGRPKGALSTHRNIAAV
VWEKFLSTETPRINMFMAVPTIYAKLLDYYDQHFTQPHVRDFVRAVCEENIRLMVSGSAALPTP
VLEQWKHATGHTLLERYGMTEIGMALSNPLAGTRLPGSVGTPLPGVEVRIVSEGLQKEGCPHAV
HAEGDESRTKVSPGFEEKEGELLVRGPSVFREYWDRPEETRSAFTADGWFKTGDTAVFKDGKYW
IRGRTSVDIIKTGGYKVSALEVERHLLAHPSIADVAVIGIPDVTWGQRVTAVVTLREGHSLSLR
DLKEWARGVLAPYAIPSELLLVEEIPRNQMGKVNKKDLVGQFYPS

hide sequence

RefSeq Acc Id:

XP_021589031 ⟸ XM_021733356

- Peptide Label:

isoform X1

- Sequence:

show sequence

MSPAVLWQGCVDAVPPSSAGRDPWRMLVSALLRCERLPFPRLAWAWASSWPTPGRPRGRGLLHT
PPTAPPDRTAPVFTRALAFGDRLALVDQHGRHTYRDLYYRSLRLSREICRLCNCVDGDLREERV
SFLCANDVSYVIAQWASWMSGGIAVPLFRKHPEAQLEYFIRDSRSSVVVAGQEYMELLRPVVRR
LGVPLLPLSPAIYLEAAEEPAEGQEQGQEWEWEWRDRGAMIFYTSGTTGRPKGALSTHRNIAAV
VTGLVHAWAWTRDDVILHVLPLHHVHGVVNKLLCPLWVGATCVMLPEFSAQQVWEKFLSTETPR
INMFMAVPTIYAKLLDYYDQHFTQPHVRDFVRAVCEENIRLMVSGSAALPTPVLEQWKHATGHT
LLERYGMTEIGMALSNPLAGTRLPGSVGTPLPGVEVRIVSEGLQKEGCPHAVHAEGDESRTKVS
PGFEEKEGELLVRGPSVFREYWDRPEETRSAFTADGWFKTGDTAVFKDGKYWIRGRTSVDIIKT
GGYKVSALEVERHLLAHPSIADVAVIGIPDVTWGQRVTAVVTLREGHSLSLRDLKEWARGVLAP
YAIPSELLLVEEIPRNQMGKVNKKDLVGQFYPS

hide sequence

RefSeq Acc Id:

XP_021589032 ⟸ XM_021733357

- Peptide Label:

isoform X2

- Sequence:

show sequence

MSPAVLWQGCVDAVPPSSAGRDPWRMLVSALLRCERLPFPRLAWAWASSWPTPGRPRGRGLLHT
PPTAPPDRTAPVFTRALAFGDRLALVDQHGRHTYRDLYYRSLRLSREICRLCNCVDGDLREERV
SFLCANDVSYVIAQWASWMSGGIAVPLFRKHPEAQLEYFIRDSRSSVVVAGQEYMELLRPVVRR
LGVPLLPLSPAIYLEAAEEPAEGQEQGQEWEWEWRDRGAMIFYTSGTTGRPKGALSTHRNIAAV
VTGLVHAWAWTRDDVILHVLPLHHVHGVVNKLLCPLWVGATCVMLPEFSAQQVWEKFLSTETPR
INMFMAVPTIYAKLLDYYDQHFTQPHVRDFVRAVCEENIRLMVSGSAALPTPVLEQWKHATGHT
LLERYGMTEIGMALSNPLAGTRLPGSVGTPLPGVEVRIVSEGLQKEGCPHAVHAEGDESRTKVS
PGFEEKEGELLVRGPSVFREYWDRPEETRSAFTADGWFKTGDTAVFKDGKYWIRGRTSVDIIKT
GGYKVSALEVERHLLAHPSIAEACWPPTPSPRSSCWWRRSHGTRWARSTRRTWSGSSTRREQRR
QRWELEDKRWPTPTAIPGSPVLCVLVQGAASQS

hide sequence

RefSeq Acc Id:

ENSSTOP00000019206 ⟸ ENSSTOT00000028137

Protein Domains

AMP-binding enzyme C-terminal AMP-dependent synthetase/ligase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000027519	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000028137.2	UniProtKB/TrEMBL
Gene3D-CATH	3.30.300.30	UniProtKB/TrEMBL
	3.40.50.12780	UniProtKB/TrEMBL
InterPro	AMP-bd_C	UniProtKB/TrEMBL
	AMP-bd_C_sf	UniProtKB/TrEMBL
	AMP-binding_CS	UniProtKB/TrEMBL
	AMP-dep_Synth/Lig	UniProtKB/TrEMBL
	ANL_N_sf	UniProtKB/TrEMBL
NCBI Gene	Acsf3	ENTREZGENE
PANTHER	ACYL-COA SYNTHETASE	UniProtKB/TrEMBL
	FATTY ACID COA SYNTHETASE FAMILY	UniProtKB/TrEMBL
Pfam	AMP-binding	UniProtKB/TrEMBL
	AMP-binding_C	UniProtKB/TrEMBL
PROSITE	AMP_BINDING	UniProtKB/TrEMBL
Superfamily-SCOP	Acetyl-CoA synthetase-like	UniProtKB/TrEMBL
UniProt	I3N4B0	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM