LOC101965545 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024409344 | 131,708,573 - 131,760,586 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936543 | 2,274,059 - 2,328,008 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936543 | 2,275,981 - 2,327,931 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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POR (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 7 | 75,915,155 - 75,986,855 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 7 | 75,899,200 - 75,986,855 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 7 | 75,544,473 - 75,616,173 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 7 | 75,382,356 - 75,454,109 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 7 | 75,227,957 - 75,260,823 | NCBI | | | | | Celera | 7 | 70,412,991 - 70,484,717 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | q11.23 | NCBI | | | | | HuRef | 7 | 70,631,215 - 70,702,985 (+) | NCBI | | HuRef | | | CHM1_1 | 7 | 75,474,511 - 75,546,243 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 7 | 77,202,773 - 77,274,511 (+) | NCBI | | T2T-CHM13v2.0 | | | CRA_TCAGchr7v2 | 7 | 74,877,484 - 74,949,237 (+) | NCBI | | | | |
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Por (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 5 | 135,698,894 - 135,764,180 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 135,698,887 - 135,764,180 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 135,670,040 - 135,735,326 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 135,670,033 - 135,735,326 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 136,165,084 - 136,211,195 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 135,973,841 - 136,019,952 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 132,696,393 - 132,742,504 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | G2 | NCBI | | | | | cM Map | 5 | 75.34 | NCBI | | | | |
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Por (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 12 | 26,587,674 - 26,655,612 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 12 | 20,951,058 - 20,999,198 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 12 | 20,951,058 - 20,999,245 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 12 | 22,092,790 - 22,140,733 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 12 | 22,705,228 - 22,753,069 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 12 | 21,771,683 - 21,819,534 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 12 | 23,998,411 - 24,017,063 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 12 | 23,998,411 - 24,046,814 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 12 | 25,995,663 - 26,014,366 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 12 | 22,078,629 - 22,097,301 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 12 | 22,065,892 - 22,141,603 (-) | NCBI | | | | | Celera | 12 | 22,713,689 - 22,732,174 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | q12 | NCBI | | | | |
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Por (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955456 | 14,698,589 - 14,748,520 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955456 | 14,698,589 - 14,748,520 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LOC100990437 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 6 | 93,968,924 - 94,040,322 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 7 | 142,233,562 - 142,304,506 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 7 | 68,035,021 - 68,105,934 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 7 | 82,364,311 - 82,437,530 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 7 | 82,364,418 - 82,437,530 (+) | Ensembl | panpan1.1 | | panPan2 | |
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POR (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 6 | 7,247,780 - 7,316,282 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 6 | 7,263,574 - 7,316,297 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 6 | 8,984,488 - 9,012,689 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 6 | 7,068,561 - 7,137,106 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 6 | 7,074,449 - 7,192,344 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 6 | 7,077,907 - 7,106,119 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 6 | 7,041,376 - 7,069,585 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 6 | 7,204,608 - 7,232,825 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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POR (Sus scrofa - pig) |
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LOC103246654 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 28 | 10,145,070 - 10,230,836 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 28 | 10,197,503 - 10,230,468 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666070 | 6,191,559 - 6,265,374 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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LOC101712555 (Heterocephalus glaber - naked mole-rat) |
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