SLC30A8 (solute carrier family 30 member 8)

Gene: SLC30A8 (solute carrier family 30 member 8) Canis lupus familiaris

Analyze

Symbol:

SLC30A8

Name:

solute carrier family 30 member 8

RGD ID:

12435768

Description:

ENCODES a protein that exhibits antiporter activity (inferred); monoatomic cation transmembrane transporter activity (inferred); protein homodimerization activity (inferred); INVOLVED IN glucose homeostasis (ortholog); insulin secretion (ortholog); positive regulation of insulin secretion (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary multiple exostoses (ortholog); maturity-onset diabetes of the young type 1 (ortholog); FOUND IN Golgi apparatus (ortholog); secretory granule (ortholog); secretory granule membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

zinc transporter 8

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	16,602,255 - 16,637,299 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	16,601,912 - 16,635,880 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	16,603,610 - 16,638,559 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	16,898,497 - 16,933,443 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	16,898,295 - 16,932,026 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	16,635,055 - 16,670,008 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	16,734,977 - 16,770,163 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	16,978,714 - 17,013,658 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

hereditary multiple exostoses (ISO)

maturity-onset diabetes of the young type 1 (ISO)

trichorhinophalangeal syndrome type I (ISO)

type 2 diabetes mellitus (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

glucose homeostasis (ISO)

insulin processing (IEA)

insulin secretion (IEA,ISO)

intracellular zinc ion homeostasis (IEA)

monoatomic cation transport (IEA)

monoatomic ion transport (IEA)

positive regulation of insulin secretion (ISO)

regulation of vesicle-mediated transport (ISO)

response to glucose (IEA)

response to interleukin-1 (ISO)

response to type II interferon (ISO)

response to zinc ion (IEA)

transmembrane transport (IEA)

zinc ion import across plasma membrane (ISO)

zinc ion import into organelle (IEA)

zinc ion transmembrane transport (IEA,ISO)

zinc ion transport (IEA)

Cellular Component

cytoplasmic vesicle (IEA)

Golgi apparatus (ISO)

intracellular membrane-bounded organelle (IEA)

membrane (IEA)

plasma membrane (IEA)

secretory granule (IEA,ISO)

secretory granule membrane (IEA,ISO)

transport vesicle membrane (IEA)

Molecular Function

antiporter activity (IEA)

monoatomic cation transmembrane transporter activity (IEA)

protein binding (ISO)

protein homodimerization activity (IEA)

zinc ion transmembrane transporter activity (IEA)

zinc:proton antiporter activity (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

SLC30A8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	16,602,255 - 16,637,299 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	16,601,912 - 16,635,880 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	16,603,610 - 16,638,559 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	16,898,497 - 16,933,443 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	16,898,295 - 16,932,026 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	16,635,055 - 16,670,008 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	16,734,977 - 16,770,163 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	16,978,714 - 17,013,658 (+)	NCBI		UU_Cfam_GSD_1.0

SLC30A8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	116,950,217 - 117,176,714 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	116,950,273 - 117,176,714 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	117,962,456 - 118,188,953 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	118,216,518 - 118,258,134 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	118,216,747 - 118,254,101	NCBI
Celera	8	114,151,202 - 114,377,691 (+)	NCBI		Celera
Cytogenetic Map	8	q24.11	NCBI
HuRef	8	113,288,921 - 113,515,635 (+)	NCBI		HuRef
CHM1_1	8	118,002,722 - 118,228,963 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	118,078,388 - 118,305,142 (+)	NCBI		T2T-CHM13v2.0

Slc30a8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	52,158,949 - 52,199,194 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	52,158,949 - 52,199,194 (+)	Ensembl		GRCm39 Ensembl
GRCm38	15	52,295,553 - 52,335,798 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	52,295,553 - 52,335,798 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	52,127,108 - 52,167,288 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	52,125,636 - 52,165,816 (+)	NCBI		MGSCv36	mm8
Celera	15	53,863,656 - 53,904,335 (+)	NCBI		Celera
Cytogenetic Map	15	C	NCBI
cM Map	15	19.88	NCBI

Slc30a8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	85,481,864 - 85,517,255 (+)	NCBI		GRCr8
mRatBN7.2	7	83,591,993 - 83,627,786 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	83,591,993 - 83,626,305 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	85,509,786 - 85,542,609 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	87,710,991 - 87,743,815 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	87,515,694 - 87,548,480 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	91,832,988 - 91,869,329 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	91,832,988 - 91,867,300 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	92,476,024 - 92,512,365 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	88,583,770 - 88,617,145 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	88,604,575 - 88,639,923 (+)	NCBI
Celera	7	80,455,350 - 80,488,134 (+)	NCBI		Celera
Cytogenetic Map	7	q31	NCBI

Slc30a8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955417	23,207,146 - 23,236,874 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955417	23,207,146 - 23,239,170 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC30A8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	134,356,700 - 134,583,629 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	109,872,083 - 110,098,929 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	113,624,785 - 113,851,633 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	116,167,700 - 116,394,095 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	116,223,595 - 116,394,095 (+)	Ensembl	panpan1.1		panPan2

Slc30a8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	21,687,819 - 21,725,947 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	29,114,713 - 29,151,993 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	29,114,713 - 29,151,993 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC30A8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	21,517,486 - 21,555,746 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	21,517,009 - 21,557,747 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	22,786,105 - 22,824,455 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC30A8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	111,588,517 - 111,819,908 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	111,769,181 - 111,815,885 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666039	28,509,132 - 28,557,839 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc30a8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624763	15,431,806 - 15,461,833 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624763	15,393,221 - 15,469,819 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SLC30A8
478 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium			5
Low			7				2		9		2
Below cutoff	4	5	9	5	6	5	4	3	3	8	8	5

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005627882	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038493112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038493113	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038555382	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038555383	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038619279	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038619280	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684894	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684895	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_539143	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000136	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000361	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000001287 ⟹ ENSCAFP00000001179

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	13	16,601,912 - 16,635,880 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845025879 ⟹ ENSCAFP00845020395

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	13	16,898,295 - 16,932,026 (+)	Ensembl

RefSeq Acc Id:

XM_005627882 ⟹ XP_005627939

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	13	16,602,255 - 16,637,299 (+)	NCBI
Dog10K_Boxer_Tasha	13	16,603,610 - 16,638,559 (+)	NCBI

Sequence:

show sequence

TCACCTGGTCCTTCCTGCAAGTCTCTGTAGGAAAGGAGTTTCTGTGGGTGAGAAAATGAGACCA
GGTGATAGTCTAAGGAGGCTGTAATTTTAGAGGACCTACCAAGAACATTATGTAGGAGGCTTGG
TATTCTAAATCCCGGAAGCCTTTTTACTTTTTTTCTTTGGAAAGTATGTGAATGATTGTAATGC
TGCTTTGCTTCCCAAACTGGGCAGTGAGGTAAGGAGCAGCAGCCTCTGCCACAACAAACAACAG
CAAAGCTGTCATCCTGACCACCATGGAGTTTCTTGAAAGAACTTACCTTGTGAATGACAGAGCC
ACCAAGATGTATGCCTTCAACCTAGACAGTGTGGAACTCCAGCAGAAATCCTTGAATAAAGATC
AATGTCCTGGAGAGAAGCCAGAGGAGCTGGAGTCAGGAGCCATCTATCACTGCCACAGCAACTC
CAAGGCCACAGAGAACAGAGCAAACGAGCAAGTCTACGCCAAGTGGAAACTCTATGCTGCTTCG
GGAGTATGCTTCATTTTCATGATTGCAGAGGTCGTGGGTGGCCACATTGCTGGGAGTCTTGCTG
TCATCACAGACGCTGCCCACCTCTTAATTGACCTGACCAGTTTCCTGCTCAGTCTCTTCTCCTT
GTGGTTGTCATCAAAGCCTCCCTCGAAGCAGCTGACATTTGGATGGCACCGGGCAGAGATCCTA
GGTGCCCTGCTGTCCATCTTGTGCGTCTGGGTGGTGACTGGGGTGTTGGTGTACCTGGCATGTG
AACGCCTGCTGTACCCCGATTACCAGATCCAGGGGACGGTGATGATCCTGGTTTCAGGCTGTGC
TGTGGCAGCCAACATTATGCTAAGTGTGATTCTGCACCAAAAACACCCTGGCCACAATCATAAG
GAAGTGCAAGCTAATGCCAGTGTCAGAGCGGCTTTTGTGCATGCCCTTGGAGATCTATTTCAGA
GCATCAGTGTGCTAACCAGTGCACTTATTATCTACTTTAAGCCAGACTATAAAATGGCTGACCC
CATCTGCACATTTGTCTTTTCCATCCTGGTTTTGGCCAGCACCATCACTGTCTTAAAGGACTTC
TCCATCTTACTCATGGAAGGTGTACCTAAGAACCTGAATTACAGTGATGTGAAAGAGCTCATCT
TAGCTGTGGATGGTGTGGTGTCTGTGCACAGCTTGCACATCTGGTCTCTAGCAATGAACCAAGT
GATTCTCTCAGCTCATGTTGCTGCAGCCAGCCGTGACAGCCAGGTTGTTCGGAGAGAGATTGTT
AAAGCCCTCAGCAATAGCTATACTGTGCATTCGCTCACCATTCAGATGGAATCTCCAGCTGATC
AGGACCCCAACTGCTTTTTCTGTGAAGACCCCCGGGACTAGTTCAGTCACAATGTCAACTTCCC
AGTTTTGATGGGCCACTATATGCTGCTCTGCAGTTTCTAGAACCTAAGAAATAAAGTACCAAAG
GAAGAAGTTTGAGAAATTCATGACACAGTACAGTGCACATTATATCCTTCTTTTTTTAGTCCAT
CCACCATAAATGAAAATGCATTTAGATTCATCAGCCAATTGGATTATCAACTCATCAGTAGCTG
TGTTCAATTACAGGAATGTGTGTAGTCTTATAGTCTTATTCCTGACTGGGACTGAAATAAAAGC
TGTTTGTAACCATAGGCAATAAAAAGTTCCTCTCCATTCAATAATGTATCCTGAGTGAGTGGGT
AAAATTGAACTCAGGAAACTCTTATTAGGAATTGGTGCCAAGGAAAGTCACAAAATTCTCTGAA
AACATGAGAAGCAAAATAAGAAGAGCCAAGCAAGGTTAAAAGAGATTCTGGAAACTTAACATCC
CACCATAACTTGACTCTCTTAGGAAGTTATAATATGATTTGGAGCAGAATCTTTTCTCTCCCTA
TCCATATCACTATTTACTAAATGGGGTAGAAATGTCCTTTTTCCTTATCAATTACAAATTATGT
TTTAATATGCCTAAAACTATTGAGTGACATTTTACTTTCTGTATAAAAGCTCTGGACCAATGAA
AAATTATGAAATTGTTGTTTTTTGAGTGTTTTCATATGGTATGACCTAATAATAGAACAGAAGC
ACAGAGCATCAGAATTCTTATCTCAGGTCACATGGAAAATAATTTAGTCAAAGAATTGAGAACT
TCCGGATCTTGAATAATTGAATAATATTTATGGAGTCCCAGCTATTGTCCAGGTTTTGCACTGG
GCTGTTTAGATATGTCACCTCATTTCATTTGAATGACAACTTTGGGAAAGTCGGAATTAATACC
ATCATGTATAGATAAGGACACAGGCTCACAGAGGTTAAGTAATTTAATCAATGTCATTCATTCA
TTCAAAAATAGTTTGTCGATGCAGGCTATGAGCTGAGTATTGGTGAACTATGTCAATACGGCCT
TTTTGTTCATGGAGCTATTTCCCTTTTGTTGGGGAGACAGGCATTCCACCAGTAAATACCAAGA
ATGTATTACAAAGAGTGGTAAGTGATAAAGGAGGAGAGGCTGGTTTAGATTGGGAGAGGTCAAT
GGACAGCCTCCCTGAAGAAACAGCATTCAAGTTGAGACCTGAATAGAAAACTAGGTGATAGCCA
GATTAATTTAGGAGGAAGTACATTCTAGAAGAACCAAGAGCATGAATGGGCACCATGAAAAAAG
AACTTGGTACATGGGAGGAAATGAGGAAGGCCCTTGTGGCTGGAGGGTACTGAGGGGTGAGTTA
AAAAAAACATGGAGGACATGAGGGAAGAGAGATGAGCAAGTCCATTTGGCAAAGTAAGATTCAT
TCAGAGTCATTGATTGTATAATTCCGTGCTTCTAGCACTGATTGTAACTCATCACCTGTAGAAA
GTAAAGTAAAATAAAGAAGTATAGGCCTACA

hide sequence

RefSeq Acc Id:

XM_038493112 ⟹ XP_038349040

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	13	16,635,066 - 16,670,008 (+)	NCBI

RefSeq Acc Id:

XM_038493113 ⟹ XP_038349041

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	13	16,635,055 - 16,670,008 (+)	NCBI

RefSeq Acc Id:

XM_038555382 ⟹ XP_038411310

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	13	16,978,725 - 17,013,658 (+)	NCBI

RefSeq Acc Id:

XM_038555383 ⟹ XP_038411311

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	13	16,978,714 - 17,013,658 (+)	NCBI

RefSeq Acc Id:

XM_038619279 ⟹ XP_038475207

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	13	16,734,988 - 16,770,163 (+)	NCBI

RefSeq Acc Id:

XM_038619280 ⟹ XP_038475208

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	13	16,734,977 - 16,770,163 (+)	NCBI

RefSeq Acc Id:

XM_038684894 ⟹ XP_038540822

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	13	16,898,508 - 16,933,443 (+)	NCBI

RefSeq Acc Id:

XM_038684895 ⟹ XP_038540823

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	13	16,898,497 - 16,933,443 (+)	NCBI

RefSeq Acc Id:

XM_539143 ⟹ XP_539143

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	13	16,602,255 - 16,637,299 (+)	NCBI
Dog10K_Boxer_Tasha	13	16,603,621 - 16,638,559 (+)	NCBI

Sequence:

show sequence

TCACCTGGTCCTTCCTGCAAGTCTCTGTAGGAAAGGAGTTTCTGTGGGTGAGAAAATGAGACCA
GGTGATAGTCTAAGGAGGCTGTAATTTTAGAGGACCTACCAAGAACATTATGTAGGAGGCTTGG
TATTCTAAATCCCGGAAGCCTTTTTACTTTTTTTCTTTGGAAAGTATGTGAATGATTGTAATGC
TGCTTTGCTTCCCAAACTGGGCAGTGAGGTAAGGAGCAGCAGCCTCTGCCACAACAAACAACAG
CAAAGCTGTCATCCTGACCACCATGGAGTTTCTTGAAAGAACTTACCTTGTGAATGACAGAGCC
ACCAAGATGTATGCCTTCAACCTAGACAGTGTGGAACTCCAGCAGAAATCCTTGAATAAAGATC
AATGTCCTGGAGAGAAGCCAGAGGAGCTGGAGTCAGGAGCCATCTATCACTGCCACAGCAACTC
CAAGGCCACAGAGAACAGAGCAAACGAGCAAGTCTACGCCAAGTGGAAACTCTATGCTGCTTCG
GGAGTATGCTTCATTTTCATGATTGCAGAGGTCGTGGGTGGCCACATTGCTGGGAGTCTTGCTG
TCATCACAGACGCTGCCCACCTCTTAATTGACCTGACCAGTTTCCTGCTCAGTCTCTTCTCCTT
GTGGTTGTCATCAAAGCCTCCCTCGAAGCAGCTGACATTTGGATGGCACCGGGCAGAGATCCTA
GGTGCCCTGCTGTCCATCTTGTGCGTCTGGGTGGTGACTGGGGTGTTGGTGTACCTGGCATGTG
AACGCCTGCTGTACCCCGATTACCAGATCCAGGGGACGGTGATGATCCTGGTTTCAGGCTGTGC
TGTGGCAGCCAACATTATGCTAAGTGTGATTCTGCACCAAAAACACCCTGGCCACAATCATAAG
GAAGTGCAAGCTAATGCCAGTGTCAGAGCGGCTTTTGTGCATGCCCTTGGAGATCTATTTCAGA
GCATCAGTGTGCTAACCAGTGCACTTATTATCTACTTTAAGCCAGACTATAAAATGGCTGACCC
CATCTGCACATTTGTCTTTTCCATCCTGGTTTTGGCCAGCACCATCACTGTCTTAAAGGACTTC
TCCATCTTACTCATGGAAGGTGTACCTAAGAACCTGAATTACAGTGATGTGAAAGAGCTCATCT
TAGCTGTGGATGGTGTGGTGTCTGTGCACAGCTTGCACATCTGGTCTCTAGCAATGAACCAAGT
GATTCTCTCAGCTCATGTTGCTGCAGCAGCCAGCCGTGACAGCCAGGTTGTTCGGAGAGAGATT
GTTAAAGCCCTCAGCAATAGCTATACTGTGCATTCGCTCACCATTCAGATGGAATCTCCAGCTG
ATCAGGACCCCAACTGCTTTTTCTGTGAAGACCCCCGGGACTAGTTCAGTCACAATGTCAACTT
CCCAGTTTTGATGGGCCACTATATGCTGCTCTGCAGTTTCTAGAACCTAAGAAATAAAGTACCA
AAGGAAGAAGTTTGAGAAATTCATGACACAGTACAGTGCACATTATATCCTTCTTTTTTTAGTC
CATCCACCATAAATGAAAATGCATTTAGATTCATCAGCCAATTGGATTATCAACTCATCAGTAG
CTGTGTTCAATTACAGGAATGTGTGTAGTCTTATAGTCTTATTCCTGACTGGGACTGAAATAAA
AGCTGTTTGTAACCATAGGCAATAAAAAGTTCCTCTCCATTCAATAATGTATCCTGAGTGAGTG
GGTAAAATTGAACTCAGGAAACTCTTATTAGGAATTGGTGCCAAGGAAAGTCACAAAATTCTCT
GAAAACATGAGAAGCAAAATAAGAAGAGCCAAGCAAGGTTAAAAGAGATTCTGGAAACTTAACA
TCCCACCATAACTTGACTCTCTTAGGAAGTTATAATATGATTTGGAGCAGAATCTTTTCTCTCC
CTATCCATATCACTATTTACTAAATGGGGTAGAAATGTCCTTTTTCCTTATCAATTACAAATTA
TGTTTTAATATGCCTAAAACTATTGAGTGACATTTTACTTTCTGTATAAAAGCTCTGGACCAAT
GAAAAATTATGAAATTGTTGTTTTTTGAGTGTTTTCATATGGTATGACCTAATAATAGAACAGA
AGCACAGAGCATCAGAATTCTTATCTCAGGTCACATGGAAAATAATTTAGTCAAAGAATTGAGA
ACTTCCGGATCTTGAATAATTGAATAATATTTATGGAGTCCCAGCTATTGTCCAGGTTTTGCAC
TGGGCTGTTTAGATATGTCACCTCATTTCATTTGAATGACAACTTTGGGAAAGTCGGAATTAAT
ACCATCATGTATAGATAAGGACACAGGCTCACAGAGGTTAAGTAATTTAATCAATGTCATTCAT
TCATTCAAAAATAGTTTGTCGATGCAGGCTATGAGCTGAGTATTGGTGAACTATGTCAATACGG
CCTTTTTGTTCATGGAGCTATTTCCCTTTTGTTGGGGAGACAGGCATTCCACCAGTAAATACCA
AGAATGTATTACAAAGAGTGGTAAGTGATAAAGGAGGAGAGGCTGGTTTAGATTGGGAGAGGTC
AATGGACAGCCTCCCTGAAGAAACAGCATTCAAGTTGAGACCTGAATAGAAAACTAGGTGATAG
CCAGATTAATTTAGGAGGAAGTACATTCTAGAAGAACCAAGAGCATGAATGGGCACCATGAAAA
AAGAACTTGGTACATGGGAGGAAATGAGGAAGGCCCTTGTGGCTGGAGGGTACTGAGGGGTGAG
TTAAAAAAAACATGGAGGACATGAGGGAAGAGAGATGAGCAAGTCCATTTGGCAAAGTAAGATT
CATTCAGAGTCATTGATTGTATAATTCCGTGCTTCTAGCACTGATTGTAACTCATCACCTGTAG
AAAGTAAAGTAAAATAAAGAAGTATAGGCCTACA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005627939	(Get FASTA)	NCBI Sequence Viewer
	XP_038349040	(Get FASTA)	NCBI Sequence Viewer
	XP_038349041	(Get FASTA)	NCBI Sequence Viewer
	XP_038411310	(Get FASTA)	NCBI Sequence Viewer
	XP_038411311	(Get FASTA)	NCBI Sequence Viewer
	XP_038475207	(Get FASTA)	NCBI Sequence Viewer
	XP_038475208	(Get FASTA)	NCBI Sequence Viewer
	XP_038540822	(Get FASTA)	NCBI Sequence Viewer
	XP_038540823	(Get FASTA)	NCBI Sequence Viewer
	XP_539143	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000001179.3
	ENSCAFP00030007301.1
	ENSCAFP00040024306.1
	ENSCAFP00845020395
	ENSCAFP00845020395.1

RefSeq Acc Id:	XP_539143 ⟸ XM_539143
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0SNE8 (UniProtKB/TrEMBL), A0A8C0JSG9 (UniProtKB/TrEMBL), A0A8I3NTT5 (UniProtKB/TrEMBL), A0A8C0JSI4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEFLERTYLVNDRATKMYAFNLDSVELQQKSLNKDQCPGEKPEELESGAIYHCHSNSKATENRA NEQVYAKWKLYAASGVCFIFMIAEVVGGHIAGSLAVITDAAHLLIDLTSFLLSLFSLWLSSKPP SKQLTFGWHRAEILGALLSILCVWVVTGVLVYLACERLLYPDYQIQGTVMILVSGCAVAANIML SVILHQKHPGHNHKEVQANASVRAAFVHALGDLFQSISVLTSALIIYFKPDYKMADPICTFVFS ILVLASTITVLKDFSILLMEGVPKNLNYSDVKELILAVDGVVSVHSLHIWSLAMNQVILSAHVA AAASRDSQVVRREIVKALSNSYTVHSLTIQMESPADQDPNCFFCEDPRD hide sequence

RefSeq Acc Id:	XP_005627939 ⟸ XM_005627882
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0JSI4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEFLERTYLVNDRATKMYAFNLDSVELQQKSLNKDQCPGEKPEELESGAIYHCHSNSKATENRA NEQVYAKWKLYAASGVCFIFMIAEVVGGHIAGSLAVITDAAHLLIDLTSFLLSLFSLWLSSKPP SKQLTFGWHRAEILGALLSILCVWVVTGVLVYLACERLLYPDYQIQGTVMILVSGCAVAANIML SVILHQKHPGHNHKEVQANASVRAAFVHALGDLFQSISVLTSALIIYFKPDYKMADPICTFVFS ILVLASTITVLKDFSILLMEGVPKNLNYSDVKELILAVDGVVSVHSLHIWSLAMNQVILSAHVA AASRDSQVVRREIVKALSNSYTVHSLTIQMESPADQDPNCFFCEDPRD hide sequence

RefSeq Acc Id:

ENSCAFP00000001179 ⟸ ENSCAFT00000001287

RefSeq Acc Id:	XP_038349041 ⟸ XM_038493113
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038349040 ⟸ XM_038493112
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038475208 ⟸ XM_038619280
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038475207 ⟸ XM_038619279
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038540823 ⟸ XM_038684895
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0JSI4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038540822 ⟸ XM_038684894
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0SNE8 (UniProtKB/TrEMBL), A0A8C0JSG9 (UniProtKB/TrEMBL), A0A8I3NTT5 (UniProtKB/TrEMBL), A0A8C0JSI4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038411311 ⟸ XM_038555383
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0JSI4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038411310 ⟸ XM_038555382
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0JSG9 (UniProtKB/TrEMBL), A0A8C0JSI4 (UniProtKB/TrEMBL), A0A8C0SNE8 (UniProtKB/TrEMBL), A0A8I3NTT5 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845020395 ⟸ ENSCAFT00845025879

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000000825	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030004523	UniProtKB/TrEMBL
	ENSCAFG00040015221	UniProtKB/TrEMBL
	ENSCAFG00845014466	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000001287.5	UniProtKB/TrEMBL
	ENSCAFT00030008315.1	UniProtKB/TrEMBL
	ENSCAFT00040027988.1	UniProtKB/TrEMBL
	ENSCAFT00845025879	ENTREZGENE
	ENSCAFT00845025879.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1510.10	UniProtKB/TrEMBL
InterPro	Cation_efflux	UniProtKB/TrEMBL
	Cation_efflux_CTD_sf	UniProtKB/TrEMBL
	Cation_efflux_TMD_sf	UniProtKB/TrEMBL
NCBI Gene	SLC30A8	ENTREZGENE
PANTHER	CATION EFFLUX PROTEIN/ ZINC TRANSPORTER	UniProtKB/TrEMBL
	PTHR11562:SF37	UniProtKB/TrEMBL
Pfam	Cation_efflux	UniProtKB/TrEMBL
Superfamily-SCOP	SSF160240	UniProtKB/TrEMBL
	SSF161111	UniProtKB/TrEMBL
UniProt	A0A8C0JSG9	ENTREZGENE
	A0A8C0JSI4	ENTREZGENE
	A0A8C0SNE8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NTT5	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:46353	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM