SYTL4 (synaptotagmin like 4) - Rat Genome Database

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Gene: SYTL4 (synaptotagmin like 4) Canis lupus familiaris
Analyze
Symbol: SYTL4
Name: synaptotagmin like 4
RGD ID: 12377712
Description: ENCODES a protein that exhibits metal ion binding (inferred); neurexin family protein binding (inferred); phospholipid binding (inferred); INVOLVED IN exocytosis (ortholog); insulin secretion (ortholog); negative regulation of insulin secretion (ortholog); ASSOCIATED WITH autistic disorder (ortholog); developmental and epileptic encephalopathy 9 (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); INTERACTS WITH mocetinostat
Type: protein-coding
RefSeq Status: MODEL
Previously known as: synaptotagmin-like protein 4
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X74,537,937 - 74,617,580 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX74,539,183 - 74,565,753 (-)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0X75,947,618 - 76,027,046 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX75,946,000 - 76,027,014 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X73,510,069 - 73,589,479 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X75,180,356 - 75,259,782 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X74,941,410 - 75,020,845 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
mocetinostat  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202   PMID:37756605  


Genomics

Comparative Map Data
SYTL4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X74,537,937 - 74,617,580 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX74,539,183 - 74,565,753 (-)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0X75,947,618 - 76,027,046 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX75,946,000 - 76,027,014 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X73,510,069 - 73,589,479 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X75,180,356 - 75,259,782 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X74,941,410 - 75,020,845 (-)NCBIUU_Cfam_GSD_1.0
SYTL4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X100,674,491 - 100,732,121 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX100,671,783 - 100,732,123 (-)EnsemblGRCh38hg38GRCh38
GRCh37X99,929,488 - 99,987,108 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X99,816,144 - 99,873,154 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X99,735,633 - 99,792,643NCBI
CeleraX100,448,228 - 100,505,895 (-)NCBICelera
Cytogenetic MapXq22.1NCBI
HuRefX89,729,520 - 89,785,468 (-)NCBIHuRef
CHM1_1X99,822,386 - 99,880,040 (-)NCBICHM1_1
T2T-CHM13v2.0X99,116,950 - 99,174,573 (-)NCBIT2T-CHM13v2.0
Sytl4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X132,837,134 - 132,882,569 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX132,837,134 - 132,882,561 (-)EnsemblGRCm39 Ensembl
GRCm38X133,936,385 - 133,981,821 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX133,936,385 - 133,981,812 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X130,470,924 - 130,516,322 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X129,282,735 - 129,328,133 (-)NCBIMGSCv36mm8
CeleraX116,812,358 - 116,857,700 (-)NCBICelera
Cytogenetic MapXE3NCBI
cM MapX55.47NCBI
Sytl4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X101,428,785 - 101,479,207 (-)NCBIGRCr8
mRatBN7.2X97,135,496 - 97,185,867 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX97,135,500 - 97,185,854 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX98,811,171 - 98,836,894 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X102,320,957 - 102,346,675 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X99,824,353 - 99,850,072 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X104,763,961 - 104,814,152 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX104,765,294 - 104,814,145 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X104,598,207 - 104,648,029 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X121,473,414 - 121,499,134 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X121,546,846 - 121,572,567 (-)NCBI
CeleraX98,183,387 - 98,209,107 (-)NCBICelera
Cytogenetic MapXq32NCBI
Sytl4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555036,821,236 - 6,899,983 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555036,821,263 - 6,899,983 (-)NCBIChiLan1.0ChiLan1.0
SYTL4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X100,279,112 - 100,338,151 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X100,285,847 - 100,341,747 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X89,885,478 - 89,941,381 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X100,024,434 - 100,051,663 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX100,024,434 - 100,051,663 (-)Ensemblpanpan1.1panPan2
Sytl4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X63,607,383 - 63,670,296 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365845,884,193 - 5,917,300 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365845,882,428 - 5,945,514 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SYTL4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX82,367,549 - 82,437,401 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X82,367,546 - 82,437,439 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X90,208,955 - 90,310,119 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SYTL4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X88,985,495 - 89,041,256 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX88,987,016 - 89,041,194 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606513,915,106 - 13,971,164 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sytl4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249021,876,516 - 1,942,265 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249021,876,608 - 1,945,728 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SYTL4
837 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 8 6 7
Low 5 5 14 6 6 6 6 6 6 3 6
Below cutoff 8

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005641556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014111822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014111823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014111824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022415656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022415657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022415658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038450418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038450419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038450420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038450421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038450422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038450423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038450424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038652364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038652365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038652366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038652367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038652368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038652369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038652370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAAHUQ010000391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000027774   ⟹   ENSCAFP00000025824
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX74,539,339 - 74,565,753 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000060591   ⟹   ENSCAFP00000064085
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX74,539,339 - 74,565,753 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000082386   ⟹   ENSCAFP00000047638
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX74,539,183 - 74,565,753 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000082940   ⟹   ENSCAFP00000058953
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX74,539,339 - 74,565,753 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000091241   ⟹   ENSCAFP00000050203
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX74,539,339 - 74,565,753 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845028796   ⟹   ENSCAFP00845022662
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 EnsemblX75,946,000 - 76,027,014 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845028898   ⟹   ENSCAFP00845022738
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 EnsemblX75,947,630 - 76,027,011 (-)Ensembl
RefSeq Acc Id: XM_038450418   ⟹   XP_038306346
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X75,947,618 - 76,027,046 (-)NCBI
RefSeq Acc Id: XM_038450419   ⟹   XP_038306347
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X75,947,618 - 76,027,043 (-)NCBI
RefSeq Acc Id: XM_038450420   ⟹   XP_038306348
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X75,947,618 - 76,027,046 (-)NCBI
RefSeq Acc Id: XM_038450421   ⟹   XP_038306349
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X75,947,618 - 76,027,046 (-)NCBI
RefSeq Acc Id: XM_038450422   ⟹   XP_038306350
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X75,947,618 - 76,027,043 (-)NCBI
RefSeq Acc Id: XM_038450423   ⟹   XP_038306351
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X75,947,618 - 76,027,043 (-)NCBI
RefSeq Acc Id: XM_038450424   ⟹   XP_038306352
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X75,947,618 - 76,027,018 (-)NCBI
RefSeq Acc Id: XM_038523875   ⟹   XP_038379803
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X73,510,069 - 73,589,479 (-)NCBI
RefSeq Acc Id: XM_038523876   ⟹   XP_038379804
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X73,510,069 - 73,589,476 (-)NCBI
RefSeq Acc Id: XM_038523877   ⟹   XP_038379805
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X73,510,069 - 73,589,479 (-)NCBI
RefSeq Acc Id: XM_038523878   ⟹   XP_038379806
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X73,510,069 - 73,589,479 (-)NCBI
RefSeq Acc Id: XM_038523879   ⟹   XP_038379807
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X73,510,069 - 73,589,476 (-)NCBI
RefSeq Acc Id: XM_038523880   ⟹   XP_038379808
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X73,510,069 - 73,589,476 (-)NCBI
RefSeq Acc Id: XM_038523881   ⟹   XP_038379809
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X73,510,069 - 73,589,451 (-)NCBI
RefSeq Acc Id: XM_038587840   ⟹   XP_038443768
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X74,941,410 - 75,020,845 (-)NCBI
RefSeq Acc Id: XM_038587841   ⟹   XP_038443769
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X74,941,410 - 75,020,842 (-)NCBI
RefSeq Acc Id: XM_038587842   ⟹   XP_038443770
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X74,941,410 - 75,020,845 (-)NCBI
RefSeq Acc Id: XM_038587843   ⟹   XP_038443771
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X74,941,410 - 75,020,842 (-)NCBI
RefSeq Acc Id: XM_038587844   ⟹   XP_038443772
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X74,941,410 - 75,020,842 (-)NCBI
RefSeq Acc Id: XM_038587845   ⟹   XP_038443773
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X74,941,410 - 75,020,817 (-)NCBI
RefSeq Acc Id: XM_038652364   ⟹   XP_038508292
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X75,180,356 - 75,259,782 (-)NCBI
RefSeq Acc Id: XM_038652365   ⟹   XP_038508293
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X75,180,356 - 75,259,779 (-)NCBI
RefSeq Acc Id: XM_038652366   ⟹   XP_038508294
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X75,180,356 - 75,259,782 (-)NCBI
RefSeq Acc Id: XM_038652367   ⟹   XP_038508295
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X75,180,356 - 75,259,782 (-)NCBI
RefSeq Acc Id: XM_038652368   ⟹   XP_038508296
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X75,180,356 - 75,259,779 (-)NCBI
RefSeq Acc Id: XM_038652369   ⟹   XP_038508297
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X75,180,356 - 75,259,779 (-)NCBI
RefSeq Acc Id: XM_038652370   ⟹   XP_038508298
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X75,180,356 - 75,259,754 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038306346 (Get FASTA)   NCBI Sequence Viewer  
  XP_038306347 (Get FASTA)   NCBI Sequence Viewer  
  XP_038306348 (Get FASTA)   NCBI Sequence Viewer  
  XP_038306349 (Get FASTA)   NCBI Sequence Viewer  
  XP_038306350 (Get FASTA)   NCBI Sequence Viewer  
  XP_038306351 (Get FASTA)   NCBI Sequence Viewer  
  XP_038306352 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379803 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379804 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379805 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379806 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379807 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379808 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379809 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443768 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443769 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443770 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443771 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443772 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443773 (Get FASTA)   NCBI Sequence Viewer  
  XP_038508292 (Get FASTA)   NCBI Sequence Viewer  
  XP_038508293 (Get FASTA)   NCBI Sequence Viewer  
  XP_038508294 (Get FASTA)   NCBI Sequence Viewer  
  XP_038508295 (Get FASTA)   NCBI Sequence Viewer  
  XP_038508296 (Get FASTA)   NCBI Sequence Viewer  
  XP_038508297 (Get FASTA)   NCBI Sequence Viewer  
  XP_038508298 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00030023760.1
  ENSCAFP00030023844.1
  ENSCAFP00030023938.1
  ENSCAFP00040024047.1
  ENSCAFP00040024132.1
  ENSCAFP00845022662
  ENSCAFP00845022662.1
  ENSCAFP00845022738
  ENSCAFP00845022738.1
Reference Protein Sequences
RefSeq Acc Id: ENSCAFP00000064085   ⟸   ENSCAFT00000060591
RefSeq Acc Id: ENSCAFP00000050203   ⟸   ENSCAFT00000091241
RefSeq Acc Id: ENSCAFP00000025824   ⟸   ENSCAFT00000027774
RefSeq Acc Id: ENSCAFP00000047638   ⟸   ENSCAFT00000082386
RefSeq Acc Id: ENSCAFP00000058953   ⟸   ENSCAFT00000082940
RefSeq Acc Id: XP_038379803   ⟸   XM_038523875
RefSeq Acc Id: XP_038379806   ⟸   XM_038523878
RefSeq Acc Id: XP_038379805   ⟸   XM_038523877
RefSeq Acc Id: XP_038379804   ⟸   XM_038523876
RefSeq Acc Id: XP_038379808   ⟸   XM_038523880
RefSeq Acc Id: XP_038379807   ⟸   XM_038523879
RefSeq Acc Id: XP_038379809   ⟸   XM_038523881
RefSeq Acc Id: XP_038508292   ⟸   XM_038652364
RefSeq Acc Id: XP_038508295   ⟸   XM_038652367
RefSeq Acc Id: XP_038508294   ⟸   XM_038652366
RefSeq Acc Id: XP_038508293   ⟸   XM_038652365
RefSeq Acc Id: XP_038508297   ⟸   XM_038652369
RefSeq Acc Id: XP_038508296   ⟸   XM_038652368
RefSeq Acc Id: XP_038508298   ⟸   XM_038652370
RefSeq Acc Id: XP_038306346   ⟸   XM_038450418
- UniProtKB: A0A8C0NF93 (UniProtKB/TrEMBL),   A0A8C0K423 (UniProtKB/TrEMBL),   A0A8I3NZD4 (UniProtKB/TrEMBL),   A0A8I3NZ41 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038306349   ⟸   XM_038450421
- UniProtKB: A0A8C0NF93 (UniProtKB/TrEMBL),   A0A8C0K423 (UniProtKB/TrEMBL),   A0A8I3NZD4 (UniProtKB/TrEMBL),   A0A8I3NZ41 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038306348   ⟸   XM_038450420
- UniProtKB: A0A8C0NF93 (UniProtKB/TrEMBL),   A0A8C0K423 (UniProtKB/TrEMBL),   A0A8I3NZD4 (UniProtKB/TrEMBL),   A0A8I3NZ41 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038306347   ⟸   XM_038450419
- UniProtKB: A0A8C0NF93 (UniProtKB/TrEMBL),   A0A8C0K423 (UniProtKB/TrEMBL),   A0A8I3NZD4 (UniProtKB/TrEMBL),   A0A8I3NZ41 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038306351   ⟸   XM_038450423
- UniProtKB: A0A8C0NF93 (UniProtKB/TrEMBL),   A0A8C0K423 (UniProtKB/TrEMBL),   A0A8I3NZD4 (UniProtKB/TrEMBL),   A0A8I3NZ41 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038306350   ⟸   XM_038450422
- UniProtKB: A0A8C0NF93 (UniProtKB/TrEMBL),   A0A8C0K423 (UniProtKB/TrEMBL),   A0A8I3NZD4 (UniProtKB/TrEMBL),   A0A8I3NZ41 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038306352   ⟸   XM_038450424
- UniProtKB: A0A8C0NF93 (UniProtKB/TrEMBL),   A0A8C0K423 (UniProtKB/TrEMBL),   A0A8I3NZD4 (UniProtKB/TrEMBL),   A0A8I3NZ41 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038443768   ⟸   XM_038587840
- UniProtKB: A0A8C0K423 (UniProtKB/TrEMBL),   A0A8C0NF93 (UniProtKB/TrEMBL),   A0A8I3NZ41 (UniProtKB/TrEMBL),   A0A8I3NZD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038443770   ⟸   XM_038587842
- UniProtKB: A0A8C0K423 (UniProtKB/TrEMBL),   A0A8C0NF93 (UniProtKB/TrEMBL),   A0A8I3NZ41 (UniProtKB/TrEMBL),   A0A8I3NZD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038443769   ⟸   XM_038587841
- UniProtKB: A0A8C0K423 (UniProtKB/TrEMBL),   A0A8C0NF93 (UniProtKB/TrEMBL),   A0A8I3NZ41 (UniProtKB/TrEMBL),   A0A8I3NZD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038443772   ⟸   XM_038587844
- UniProtKB: A0A8C0K423 (UniProtKB/TrEMBL),   A0A8C0NF93 (UniProtKB/TrEMBL),   A0A8I3NZ41 (UniProtKB/TrEMBL),   A0A8I3NZD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038443771   ⟸   XM_038587843
- UniProtKB: A0A8C0K423 (UniProtKB/TrEMBL),   A0A8C0NF93 (UniProtKB/TrEMBL),   A0A8I3NZ41 (UniProtKB/TrEMBL),   A0A8I3NZD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038443773   ⟸   XM_038587845
- UniProtKB: A0A8C0K423 (UniProtKB/TrEMBL),   A0A8C0NF93 (UniProtKB/TrEMBL),   A0A8I3NZ41 (UniProtKB/TrEMBL),   A0A8I3NZD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845022738   ⟸   ENSCAFT00845028898
RefSeq Acc Id: ENSCAFP00845022662   ⟸   ENSCAFT00845028796
Protein Domains
C2   RabBD


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000017529 Ensembl
  ENSCAFG00030014753 UniProtKB/TrEMBL
  ENSCAFG00040015024 UniProtKB/TrEMBL
  ENSCAFG00845016183 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00030027224.1 UniProtKB/TrEMBL
  ENSCAFT00030027328.1 UniProtKB/TrEMBL
  ENSCAFT00030027433.1 UniProtKB/TrEMBL
  ENSCAFT00040027687.1 UniProtKB/TrEMBL
  ENSCAFT00040027785.1 UniProtKB/TrEMBL
  ENSCAFT00845028796 ENTREZGENE
  ENSCAFT00845028796.1 UniProtKB/TrEMBL
  ENSCAFT00845028898 ENTREZGENE
  ENSCAFT00845028898.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.150 UniProtKB/TrEMBL
  3.30.40.10 UniProtKB/TrEMBL
InterPro C2_dom UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/TrEMBL
  FYVE_2 UniProtKB/TrEMBL
  FYVE_Slp4 UniProtKB/TrEMBL
  Rab_BD UniProtKB/TrEMBL
  SLP-4/5_C2A UniProtKB/TrEMBL
  Synaptotagmin UniProtKB/TrEMBL
  SYTL1-5_C2B UniProtKB/TrEMBL
  Znf_FYVE_PHD UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
NCBI Gene SYTL4 ENTREZGENE
PANTHER BITESIZE, ISOFORM I UniProtKB/TrEMBL
  PTHR45716:SF4 UniProtKB/TrEMBL
Pfam FYVE_2 UniProtKB/TrEMBL
  PF00168 UniProtKB/TrEMBL
PRINTS SYNAPTOTAGMN UniProtKB/TrEMBL
PROSITE PS50004 UniProtKB/TrEMBL
  RABBD UniProtKB/TrEMBL
SMART SM00239 UniProtKB/TrEMBL
Superfamily-SCOP SSF49562 UniProtKB/TrEMBL
  SSF57903 UniProtKB/TrEMBL
UniProt A0A8C0K423 ENTREZGENE
  A0A8C0NF93 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RKH3_CANLF UniProtKB/TrEMBL
  A0A8C0SNZ9_CANLF UniProtKB/TrEMBL
  A0A8I3NZ41 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NZD4 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:47053 ENTREZGENE