SCN9A (sodium voltage-gated channel alpha subunit 9) - Rat Genome Database

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Gene: SCN9A (sodium voltage-gated channel alpha subunit 9) Canis lupus familiaris
Analyze
Symbol: SCN9A
Name: sodium voltage-gated channel alpha subunit 9
RGD ID: 12294835
Description: ENCODES a protein that exhibits sodium ion binding (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN behavioral response to formalin induced pain (ortholog); behavioral response to pain (ortholog); inflammatory response (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); FOUND IN voltage-gated sodium channel complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: sodium channel protein type 9 subunit alpha
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13611,287,358 - 11,382,897 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3611,290,625 - 11,383,255 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3611,431,905 - 11,590,849 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03611,421,333 - 11,580,725 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3611,422,611 - 11,517,286 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13611,503,582 - 11,662,869 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03611,475,664 - 11,634,434 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03611,588,422 - 11,748,250 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
SCN9A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13611,287,358 - 11,382,897 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3611,290,625 - 11,383,255 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3611,431,905 - 11,590,849 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03611,421,333 - 11,580,725 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3611,422,611 - 11,517,286 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13611,503,582 - 11,662,869 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03611,475,664 - 11,634,434 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03611,588,422 - 11,748,250 (-)NCBIUU_Cfam_GSD_1.0
SCN9A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382166,195,185 - 166,375,987 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2166,195,185 - 166,376,001 (-)EnsemblGRCh38hg38GRCh38
GRCh372167,051,695 - 167,232,497 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362166,759,941 - 166,876,560 (-)NCBINCBI36Build 36hg18NCBI36
Build 342166,880,315 - 166,993,821NCBI
Celera2160,661,621 - 160,841,488 (-)NCBICelera
Cytogenetic Map2q24.3NCBI
HuRef2158,932,999 - 159,113,694 (-)NCBIHuRef
CHM1_12167,057,860 - 167,238,542 (-)NCBICHM1_1
T2T-CHM13v2.02166,652,733 - 166,833,467 (-)NCBIT2T-CHM13v2.0
Scn9a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39266,310,424 - 66,465,456 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl266,310,424 - 66,465,306 (-)EnsemblGRCm39 Ensembl
GRCm38266,480,080 - 66,635,114 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl266,480,080 - 66,634,962 (-)EnsemblGRCm38mm10GRCm38
MGSCv37266,318,137 - 66,473,009 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36266,280,919 - 66,435,791 (-)NCBIMGSCv36mm8
Celera268,159,792 - 68,315,357 (-)NCBICelera
Cytogenetic Map2C1.3NCBI
cM Map239.13NCBI
Scn9a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8371,553,185 - 71,701,377 (-)NCBIGRCr8
mRatBN7.2351,145,148 - 51,293,342 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl351,145,146 - 51,293,516 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx354,489,348 - 54,634,230 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0363,072,952 - 63,217,828 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0360,852,549 - 60,997,783 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0352,583,953 - 52,664,209 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl352,583,951 - 52,664,209 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0359,207,264 - 59,286,961 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4348,438,725 - 48,518,893NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera350,729,098 - 50,808,151 (-)NCBICelera
Cytogenetic Map3q21NCBI
Scn9a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554497,923,801 - 8,017,569 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554497,858,156 - 8,017,569 (+)NCBIChiLan1.0ChiLan1.0
SCN9A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21368,850,849 - 69,028,376 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B68,865,826 - 69,043,323 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B53,468,290 - 53,643,747 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B170,944,974 - 171,119,275 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B170,944,974 - 171,054,013 (-)Ensemblpanpan1.1panPan2
Scn9a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303128,464,705 - 128,638,949 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646913,064,043 - 13,152,974 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493646913,063,971 - 13,153,030 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SCN9A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1572,748,705 - 72,912,382 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11572,745,706 - 72,912,352 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21581,262,169 - 81,433,272 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SCN9A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11051,711,446 - 51,898,856 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1051,714,931 - 51,829,621 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040147,611,948 - 147,803,960 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Scn9a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247873,997,887 - 4,085,449 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247873,995,319 - 4,148,230 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SCN9A
1098 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 7 6 2
Low 5 1 10 1 6 1 6 6 8 8 6
Below cutoff 4 5 5 5 6

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022414839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022414840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022414841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022414842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022414843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022414844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038463447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038463448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038584713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038584714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038584715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038584716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000018336   ⟹   ENSCAFP00000016982
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3611,290,625 - 11,382,901 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000046546   ⟹   ENSCAFP00000043072
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3611,290,625 - 11,382,901 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000062692   ⟹   ENSCAFP00000056289
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3611,290,625 - 11,382,901 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000081642   ⟹   ENSCAFP00000060236
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3611,290,625 - 11,382,901 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000085582   ⟹   ENSCAFP00000052092
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3611,290,625 - 11,383,255 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845031487   ⟹   ENSCAFP00845024657
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3611,422,611 - 11,517,286 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845031763   ⟹   ENSCAFP00845024858
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3611,422,611 - 11,517,286 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845031924   ⟹   ENSCAFP00845024965
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3611,422,611 - 11,517,286 (-)Ensembl
RefSeq Acc Id: XM_022414843   ⟹   XP_022270551
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13611,287,358 - 11,376,374 (-)NCBI
Dog10K_Boxer_Tasha3611,431,905 - 11,520,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022414844   ⟹   XP_022270552
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13611,287,358 - 11,382,729 (-)NCBI
Dog10K_Boxer_Tasha3611,431,905 - 11,527,258 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038446943   ⟹   XP_038302871
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03611,421,333 - 11,580,725 (-)NCBI
RefSeq Acc Id: XM_038446944   ⟹   XP_038302872
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03611,421,333 - 11,580,725 (-)NCBI
RefSeq Acc Id: XM_038446945   ⟹   XP_038302873
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03611,421,333 - 11,510,385 (-)NCBI
RefSeq Acc Id: XM_038446946   ⟹   XP_038302874
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03611,421,333 - 11,517,114 (-)NCBI
RefSeq Acc Id: XM_038463447   ⟹   XP_038319375
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3611,431,905 - 11,590,849 (-)NCBI
RefSeq Acc Id: XM_038463448   ⟹   XP_038319376
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3611,431,905 - 11,590,849 (-)NCBI
RefSeq Acc Id: XM_038521015   ⟹   XP_038376943
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13611,503,582 - 11,662,869 (-)NCBI
RefSeq Acc Id: XM_038521016   ⟹   XP_038376944
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13611,503,582 - 11,662,869 (-)NCBI
RefSeq Acc Id: XM_038521017   ⟹   XP_038376945
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13611,503,582 - 11,592,607 (-)NCBI
RefSeq Acc Id: XM_038521018   ⟹   XP_038376946
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13611,503,582 - 11,599,335 (-)NCBI
RefSeq Acc Id: XM_038584713   ⟹   XP_038440641
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03611,588,422 - 11,748,250 (-)NCBI
RefSeq Acc Id: XM_038584714   ⟹   XP_038440642
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03611,588,422 - 11,748,250 (-)NCBI
RefSeq Acc Id: XM_038584715   ⟹   XP_038440643
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03611,588,422 - 11,677,757 (-)NCBI
RefSeq Acc Id: XM_038584716   ⟹   XP_038440644
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03611,588,422 - 11,684,486 (-)NCBI
RefSeq Acc Id: XM_038649132   ⟹   XP_038505060
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03611,475,664 - 11,634,434 (-)NCBI
RefSeq Acc Id: XM_038649133   ⟹   XP_038505061
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03611,475,664 - 11,634,434 (-)NCBI
RefSeq Acc Id: XM_038649134   ⟹   XP_038505062
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03611,475,664 - 11,564,725 (-)NCBI
RefSeq Acc Id: XM_038649135   ⟹   XP_038505063
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03611,475,664 - 11,571,081 (-)NCBI
Protein Sequences
Protein RefSeqs XP_022270551 (Get FASTA)   NCBI Sequence Viewer  
  XP_022270552 (Get FASTA)   NCBI Sequence Viewer  
  XP_038302871 (Get FASTA)   NCBI Sequence Viewer  
  XP_038302872 (Get FASTA)   NCBI Sequence Viewer  
  XP_038302873 (Get FASTA)   NCBI Sequence Viewer  
  XP_038302874 (Get FASTA)   NCBI Sequence Viewer  
  XP_038319375 (Get FASTA)   NCBI Sequence Viewer  
  XP_038319376 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376943 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376944 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376945 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376946 (Get FASTA)   NCBI Sequence Viewer  
  XP_038440641 (Get FASTA)   NCBI Sequence Viewer  
  XP_038440642 (Get FASTA)   NCBI Sequence Viewer  
  XP_038440643 (Get FASTA)   NCBI Sequence Viewer  
  XP_038440644 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505060 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505061 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505062 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505063 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000016982.3
  ENSCAFP00000043072.2
  ENSCAFP00000056289.1
  ENSCAFP00040041419.1
  ENSCAFP00040041445.1
  ENSCAFP00040041449.1
  ENSCAFP00040041454.1
  ENSCAFP00845024657
  ENSCAFP00845024657.1
  ENSCAFP00845024858
  ENSCAFP00845024858.1
  ENSCAFP00845024965
  ENSCAFP00845024965.1
Reference Protein Sequences
RefSeq Acc Id: XP_022270552   ⟸   XM_022414844
- Peptide Label: isoform X4
- UniProtKB: A0A8C0TTJ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022270551   ⟸   XM_022414843
- Peptide Label: isoform X3
- UniProtKB: A0A8C0TU97 (UniProtKB/TrEMBL),   A0A8I3P301 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000056289   ⟸   ENSCAFT00000062692
RefSeq Acc Id: ENSCAFP00000016982   ⟸   ENSCAFT00000018336
RefSeq Acc Id: ENSCAFP00000052092   ⟸   ENSCAFT00000085582
RefSeq Acc Id: ENSCAFP00000043072   ⟸   ENSCAFT00000046546
RefSeq Acc Id: ENSCAFP00000060236   ⟸   ENSCAFT00000081642
RefSeq Acc Id: XP_038376944   ⟸   XM_038521016
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038376943   ⟸   XM_038521015
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038376946   ⟸   XM_038521018
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038376945   ⟸   XM_038521017
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038505061   ⟸   XM_038649133
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038505060   ⟸   XM_038649132
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038505063   ⟸   XM_038649135
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038505062   ⟸   XM_038649134
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038302872   ⟸   XM_038446944
- Peptide Label: isoform X2
- UniProtKB: A0A8C0TWN1 (UniProtKB/TrEMBL),   A0A8I3P4Z8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038302871   ⟸   XM_038446943
- Peptide Label: isoform X1
- UniProtKB: A0A8C0TWN1 (UniProtKB/TrEMBL),   A0A8I3P4Z8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038302874   ⟸   XM_038446946
- Peptide Label: isoform X4
- UniProtKB: A0A8C0TTJ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038302873   ⟸   XM_038446945
- Peptide Label: isoform X3
- UniProtKB: A0A8C0TU97 (UniProtKB/TrEMBL),   A0A8I3P301 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038319376   ⟸   XM_038463448
- Peptide Label: isoform X2
- UniProtKB: A0A8C0TWN1 (UniProtKB/TrEMBL),   A0A8I3P4Z8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038319375   ⟸   XM_038463447
- Peptide Label: isoform X1
- UniProtKB: A0A8C0TWN1 (UniProtKB/TrEMBL),   A0A8I3P4Z8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038440642   ⟸   XM_038584714
- Peptide Label: isoform X2
- UniProtKB: A0A8C0TWN1 (UniProtKB/TrEMBL),   A0A8I3P4Z8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038440641   ⟸   XM_038584713
- Peptide Label: isoform X1
- UniProtKB: A0A8C0TWN1 (UniProtKB/TrEMBL),   A0A8I3P4Z8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038440644   ⟸   XM_038584716
- Peptide Label: isoform X4
- UniProtKB: A0A8C0TTJ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038440643   ⟸   XM_038584715
- Peptide Label: isoform X3
- UniProtKB: A0A8C0TU97 (UniProtKB/TrEMBL),   A0A8I3P301 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845024858   ⟸   ENSCAFT00845031763
RefSeq Acc Id: ENSCAFP00845024965   ⟸   ENSCAFT00845031924
RefSeq Acc Id: ENSCAFP00845024657   ⟸   ENSCAFT00845031487
Protein Domains
Ion transport   Sodium ion transport-associated   Voltage-gated Na+ ion channel cytoplasmic


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000011438 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00040025392 UniProtKB/TrEMBL
  ENSCAFG00845017751 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000018336.4 UniProtKB/TrEMBL
  ENSCAFT00000046546.4 UniProtKB/TrEMBL
  ENSCAFT00000062692.2 UniProtKB/TrEMBL
  ENSCAFT00040047449.1 UniProtKB/TrEMBL
  ENSCAFT00040047484.1 UniProtKB/TrEMBL
  ENSCAFT00040047488.1 UniProtKB/TrEMBL
  ENSCAFT00040047493.1 UniProtKB/TrEMBL
  ENSCAFT00845031487 ENTREZGENE
  ENSCAFT00845031487.1 UniProtKB/TrEMBL
  ENSCAFT00845031763 ENTREZGENE
  ENSCAFT00845031763.1 UniProtKB/TrEMBL
  ENSCAFT00845031924 ENTREZGENE
  ENSCAFT00845031924.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.70 UniProtKB/TrEMBL
  1.20.120.350 UniProtKB/TrEMBL
  EF-hand UniProtKB/TrEMBL
  iswi atpase UniProtKB/TrEMBL
InterPro Ion_trans_dom UniProtKB/TrEMBL
  IQ_motif_EF-hand-BS UniProtKB/TrEMBL
  Na_channel_asu UniProtKB/TrEMBL
  Na_chnl_inactivation_gate UniProtKB/TrEMBL
  Na_trans_assoc UniProtKB/TrEMBL
  Na_trans_cytopl UniProtKB/TrEMBL
  VGCC_Ca_Na UniProtKB/TrEMBL
  Volt_channel_dom_sf UniProtKB/TrEMBL
NCBI Gene SCN9A ENTREZGENE
PANTHER PTHR10037 UniProtKB/TrEMBL
  PTHR10037:SF221 UniProtKB/TrEMBL
Pfam Ion_trans UniProtKB/TrEMBL
  Na_trans_assoc UniProtKB/TrEMBL
  Na_trans_cytopl UniProtKB/TrEMBL
PRINTS NACHANNEL UniProtKB/TrEMBL
SMART SM00015 UniProtKB/TrEMBL
Superfamily-SCOP Voltage-gated potassium channels UniProtKB/TrEMBL
UniProt A0A8C0TTJ9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TU97 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TWN1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TWR2_CANLF UniProtKB/TrEMBL
  A0A8I3NZ81_CANLF UniProtKB/TrEMBL
  A0A8I3P301 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3P4Z8 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:45924 ENTREZGENE