CCKAR (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 3 | 84,010,700 - 84,019,066 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 3 | 84,010,205 - 84,021,293 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 3 | 86,523,114 - 86,531,436 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 3 | 84,979,595 - 84,989,334 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 3 | 84,978,882 - 84,990,505 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 3 | 84,102,638 - 84,110,963 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 3 | 84,222,497 - 84,230,820 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 3 | 84,607,068 - 84,615,397 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
CCKAR (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 4 | 26,481,396 - 26,490,484 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 26,481,396 - 26,490,484 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 26,483,018 - 26,492,106 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 26,092,116 - 26,101,140 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 4 | 26,159,286 - 26,168,311 | NCBI | | | | | Celera | 4 | 26,934,075 - 26,943,099 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | p15.2 | NCBI | | | | | HuRef | 4 | 25,821,291 - 25,830,315 (-) | NCBI | | HuRef | | | CHM1_1 | 4 | 26,484,379 - 26,493,404 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 26,466,670 - 26,475,758 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Cckar (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 5 | 53,855,827 - 53,865,046 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 53,855,118 - 53,865,047 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 53,698,485 - 53,707,704 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 53,697,776 - 53,707,705 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 54,089,724 - 54,098,943 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 53,986,735 - 53,996,350 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 51,081,684 - 51,090,889 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | C1 | NCBI | | | | | cM Map | 5 | 29.52 | NCBI | | | | |
|
Cckar (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 14 | 61,505,270 - 61,513,618 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 57,292,397 - 57,300,747 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 57,292,397 - 57,300,747 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 14 | 61,699,304 - 61,707,579 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 63,001,655 - 63,009,913 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 59,398,438 - 59,406,696 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 59,610,939 - 59,619,786 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 59,611,434 - 59,619,783 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 59,691,504 - 59,747,723 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 14 | 62,052,510 - 62,057,201 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 14 | 62,054,843 - 62,064,735 (+) | NCBI | | | | | Celera | 14 | 56,400,364 - 56,408,663 (+) | NCBI | | Celera | | | RH 3.4 Map | 14 | 455.67 | RGD | | | | | Cytogenetic Map | 14 | q11 | NCBI | | | | |
|
Cckar (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955443 | 18,737,974 - 18,748,727 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955443 | 18,738,029 - 18,748,684 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
CCKAR (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 3 | 26,733,119 - 26,745,226 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 26,924,864 - 26,936,971 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 20,881,340 - 20,890,986 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 26,157,702 - 26,166,773 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 26,157,702 - 26,166,773 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
Cckar (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405285 | 49,605,282 - 49,613,370 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936477 | 3,306,874 - 3,314,714 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936477 | 3,306,898 - 3,314,659 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
CCKAR (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 8 | 20,188,830 - 20,199,344 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 20,187,324 - 20,200,273 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 20,563,652 - 20,574,944 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
CCKAR (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 27 | 23,855,766 - 23,866,104 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 27 | 23,856,705 - 23,865,367 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666047 | 70,369,554 - 70,378,492 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Cckar (Heterocephalus glaber - naked mole-rat) |
|