TACR1 (tachykinin receptor 1) - Rat Genome Database

Name: TACR1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: TACR1 (tachykinin receptor 1) Canis lupus familiaris

Analyze

Symbol:

TACR1

Name:

tachykinin receptor 1

RGD ID:

12215791

Description:

ENCODES a protein that exhibits substance P receptor activity (ortholog); INVOLVED IN aggressive behavior (ortholog); angiotensin-mediated drinking behavior (ortholog); associative learning (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); acute necrotizing pancreatitis (ortholog); alcohol use disorder (ortholog); FOUND IN cell body (ortholog); cell surface (ortholog); dendrite (ortholog)

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

neurokinin receptor subtype NK1; NK-1 receptor; NK-1R; SPR; substance-P receptor

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TACR1 (tachykinin receptor 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Tacr1 (tachykinin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tacr1 (tachykinin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tacr1 (tachykinin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TACR1 (tachykinin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tacr1 (tachykinin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TACR1 (tachykinin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TACR1 (tachykinin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tacr1 (tachykinin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	48,038,010 - 48,178,971 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	48,038,010 - 48,178,971 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	47,681,510 - 47,821,826 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	48,900,538 - 49,041,473 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	48,899,743 - 49,044,192 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	47,916,025 - 48,056,577 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	47,980,726 - 48,121,228 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	48,542,868 - 48,683,479 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Acute Lung Injury (ISO)

acute necrotizing pancreatitis (ISO)

alcohol use disorder (ISO)

allergic rhinitis (ISO)

asthma (ISO)

attention deficit hyperactivity disorder (ISO)

bipolar disorder (ISO)

Bradycardia (ISO)

bronchial disease (ISO)

Bronchial Hyperreactivity (ISO)

Burns (ISO)

central sleep apnea (ISO)

colitis (ISO)

cystitis (ISO)

developmental disorder of mental health (ISO)

exercise-induced bronchoconstriction (ISO)

genetic disease (ISO)

Hyperalgesia (ISO)

Hyperoxia (ISO)

hypertension (ISO)

Hypotension (ISO)

Inflammation (ISO)

Lung Injury (ISO)

Neurogenic Inflammation (ISO)

Pain (ISO)

pancreatitis (ISO)

pulmonary edema (ISO)

pulmonary emphysema (ISO)

pulmonary hypertension (ISO)

respiratory syncytial virus infectious disease (ISO)

Spinal Cord Injuries (ISO)

Subarachnoid Hemorrhage (ISO)

Ventilator-Induced Lung Injury (ISO)

Vomiting (ISO)

Weight Gain (ISO)

withdrawal disorder (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

aggressive behavior (ISO)

angiotensin-mediated drinking behavior (ISO)

associative learning (ISO)

behavioral response to pain (ISO)

eating behavior (ISO)

G protein-coupled receptor signaling pathway (IEA)

learning or memory (ISO)

long-term memory (ISO)

operant conditioning (ISO)

positive regulation of action potential (ISO)

positive regulation of blood pressure (ISO)

positive regulation of cytosolic calcium ion concentration (IEA,ISO)

positive regulation of epithelial cell migration (ISO)

positive regulation of epithelial cell proliferation (ISO)

positive regulation of flagellated sperm motility (IBA,IEA)

positive regulation of hormone secretion (ISO)

positive regulation of leukocyte migration (ISO)

positive regulation of lymphocyte proliferation (ISO)

positive regulation of ossification (ISO)

positive regulation of stress fiber assembly (ISO)

positive regulation of synaptic transmission, cholinergic (ISO)

positive regulation of synaptic transmission, GABAergic (ISO)

positive regulation of uterine smooth muscle contraction (ISO)

positive regulation of vascular permeability (ISO)

positive regulation of vasoconstriction (ISO)

regulation of blood pressure (ISO)

regulation of smooth muscle cell migration (ISO)

regulation of smooth muscle cell proliferation (ISO)

regulation of uterine smooth muscle contraction (IEA)

response to auditory stimulus (ISO)

response to electrical stimulus (ISO)

response to estradiol (ISO)

response to ethanol (ISO)

response to hormone (ISO)

response to nicotine (ISO)

response to organic cyclic compound (ISO)

response to ozone (ISO)

response to pain (IEA,ISO)

response to progesterone (ISO)

signal transduction (IEA)

smooth muscle contraction involved in micturition (ISO)

sperm ejaculation (ISO)

tachykinin receptor signaling pathway (IEA)

Cellular Component

cell body (ISO)

cell periphery (IEA)

cell surface (ISO)

dendrite (ISO)

membrane (IEA)

plasma membrane (IBA,IEA)

sperm flagellum (IEA)

sperm head (IEA)

sperm midpiece (IBA,IEA)

Molecular Function

G protein-coupled receptor activity (IEA)

protein binding (ISO)

substance P receptor activity (IBA,IEA,ISO)

tachykinin receptor activity (IEA)

References

Additional References at PubMed

PMID:7891345	PMID:22301074	PMID:24751104	PMID:30032202

Genomics

Comparative Map Data

TACR1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	48,038,010 - 48,178,971 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	48,038,010 - 48,178,971 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	47,681,510 - 47,821,826 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	48,900,538 - 49,041,473 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	48,899,743 - 49,044,192 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	47,916,025 - 48,056,577 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	47,980,726 - 48,121,228 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	48,542,868 - 48,683,479 (+)	NCBI		UU_Cfam_GSD_1.0

TACR1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	75,046,463 - 75,199,520 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	75,046,463 - 75,199,520 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	75,273,590 - 75,426,646 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	75,129,738 - 75,279,781 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	75,189,817 - 75,337,838	NCBI
Celera	2	75,104,880 - 75,257,954 (-)	NCBI		Celera
Cytogenetic Map	2	p12	NCBI
HuRef	2	75,010,440 - 75,164,411 (-)	NCBI		HuRef
CHM1_1	2	75,202,888 - 75,356,007 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	75,055,302 - 75,208,694 (-)	NCBI		T2T-CHM13v2.0

Tacr1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	82,378,990 - 82,537,085 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	82,379,315 - 82,537,085 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	82,402,003 - 82,560,104 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	82,402,334 - 82,560,104 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	82,352,469 - 82,510,098 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	82,368,133 - 82,525,757 (+)	NCBI		MGSCv36	mm8
Celera	6	84,384,420 - 84,542,486 (+)	NCBI		Celera
Cytogenetic Map	6	C3	NCBI
cM Map	6	35.94	NCBI

Tacr1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	116,478,617 - 116,647,492 (+)	NCBI		GRCr8
mRatBN7.2	4	114,920,844 - 115,089,733 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	114,920,844 - 115,089,733 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	120,383,645 - 120,552,243 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	116,158,843 - 116,327,453 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	114,778,790 - 114,948,892 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	113,247,236 - 113,416,139 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	113,247,795 - 113,414,504 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	177,926,094 - 178,095,041 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	116,610,595 - 116,780,394 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	116,855,058 - 117,024,964 (+)	NCBI
Celera	4	103,918,032 - 104,086,347 (+)	NCBI		Celera
Cytogenetic Map	4	q34	NCBI

Tacr1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955424	10,614,340 - 10,761,872 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955424	10,614,340 - 10,761,872 (+)	NCBI	ChiLan1.0	ChiLan1.0

TACR1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	51,188,457 - 51,344,443 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	51,191,211 - 51,347,197 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	75,111,339 - 75,267,320 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	76,614,478 - 76,771,018 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	76,614,478 - 76,771,018 (-)	Ensembl	panpan1.1		panPan2

Tacr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	9,315,839 - 9,471,281 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936556	1,266,613 - 1,421,275 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936556	1,266,621 - 1,421,271 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TACR1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	67,839,411 - 68,021,724 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	67,839,367 - 68,021,733 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

TACR1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	32,080,319 - 32,236,556 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	32,083,615 - 32,233,596 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	79,940,541 - 80,098,197 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tacr1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624749	28,243,640 - 28,455,086 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624749	28,243,667 - 28,455,012 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TACR1
1911 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium
Low	5		18	5		5	4		12		9	6
Below cutoff		5	4	1	6	1	2	6		8	1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001012619	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ884915	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	S75109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000013011 ⟹ ENSCAFP00000012041

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	17	48,038,010 - 48,178,971 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845029508 ⟹ ENSCAFP00845023180

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	17	48,899,743 - 49,044,192 (+)	Ensembl

RefSeq Acc Id:

NM_001012619 ⟹ NP_001012637

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	17	48,038,010 - 48,178,971 (+)	NCBI
Dog10K_Boxer_Tasha	17	47,681,510 - 47,821,826 (+)	NCBI
ROS_Cfam_1.0	17	48,900,538 - 49,041,473 (+)	NCBI
UMICH_Zoey_3.1	17	47,916,025 - 48,056,577 (+)	NCBI
UNSW_CanFamBas_1.0	17	47,980,726 - 48,121,228 (+)	NCBI
UU_Cfam_GSD_1.0	17	48,542,868 - 48,683,479 (+)	NCBI

Sequence:

show sequence

ATGGATAACGTCCTCCAGGTAGACTCAGACCTCTTCCCAAATATCTCCACCAACACCTCGGAGC
CCAATCAGTTCGTGCAGCCAGCCTGGCAAATTGTCCTTTGGGCAGCTGCCTATACGGTCATCGT
GGTGACCTCTGTCGTGGGCAACGTGGTGGTGATGTGGATCATCCTGGCCCACAAGAGAATGAGG
ACAGTGACTAACTACTTCCTGGTGAACCTGGCTTTCGCAGAGGCATCCATGGCTGCCTTCAACA
CAGTGGTGAACTTCACCTACGCTGTCCACAATGAGTGGTACTACGGCCTCTTCTACTGCAAGTT
CCACAACTTCTTCCCCATCGCCGCTGTCTTCGCCAGCATCTACTCCATGACGGCTGTGGCCTTT
GATAGGTACATGGCCATCATCCACCCCCTCCAGCCCCGGCTGTCGGCCACGGCCACCAAGGTGG
TCATCTGTGTCATCTGGGTCCTGGCTCTTCTACTGGCCTTCCCCCAGGGCTACTACTCAACCAC
AGAGACCATGCCCAACAGAGTGGTGTGCATGATTGAATGGCCAGAGCATCCCAACAAGATTTAT
GAGAAAGTGTACCACATCTGCGTAACTGTGCTGATCTACTTCCTCCCCTTGCTGGTGATTGGCT
ATGCATACACAGTAGTGGGAATCACCCTGTGGGCCAGCGAGATCCCTGGGGACTCCTCTGACCG
TTACCACGAGCAGGTTTCCGCCAAGCGCAAGGTGGTCAAGATGATGATTGTCGTGGTATGCACC
TTTGCCATCTGCTGGCTGCCCTTCCACATCTTCTTCCTCCTGCCTTACATCAACCCTGATCTCT
ACCTGGAGAAGTTTATTCAGCAGGTCTACCTGGCCATCATGTGGCTGGCCATGAGCTCCACCAT
GTACAACCCCATCATCTACTGCTGCCTCAACGACAGGTTCCGTCTGGGCTTCAAACATGCCTTC
CGGTGCTGCCCCTTTATCAGCGCCGGCGACTACGAGGGGCTCGAAATGAAATCCACCCGGTACC
TCCAAACCCAGGGCAGCGTGTATAAAGTCAGCCGCCTGGAGACCACTGTCTCCACCGTGGTGGG
GGCCCATGAGGAGGAGCTAGAGGATGGTCCCAAGACCACACCCTCATCCCTGGACCTCACCTCC
AACGGTTCCTCTCGCAGTGACTCCAAGACCATGACCGAGAGCTTCAGCTTCTACTCCAACATGC
TCTCCTAG

hide sequence

Protein Sequences


Protein RefSeqs	NP_001012637	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD14166	(Get FASTA)	NCBI Sequence Viewer
	CAI58656	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000012041.3
	ENSCAFP00030028765.1
	ENSCAFP00040010993.1
	ENSCAFP00805033817
	ENSCAFP00845023180
	ENSCAFP00845023180.1
GenBank Protein	Q5DUB3	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001012637 ⟸ NM_001012619

- UniProtKB:

Q5DUB3 (UniProtKB/Swiss-Prot), A0A8C0R0R9 (UniProtKB/TrEMBL), A0A8P0SDI4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDNVLQVDSDLFPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMR
TVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAF
DRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFPQGYYSTTETMPNRVVCMIEWPEHPNKIY
EKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCT
FAICWLPFHIFFLLPYINPDLYLEKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAF
RCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTVSTVVGAHEEELEDGPKTTPSSLDLTS
NGSSRSDSKTMTESFSFYSNMLS

hide sequence

RefSeq Acc Id:

ENSCAFP00000012041 ⟸ ENSCAFT00000013011

RefSeq Acc Id:

ENSCAFP00845023180 ⟸ ENSCAFT00845029508

Protein Domains

G-protein coupled receptors family 1 profile

Promoters

RGD ID:

13686300

Promoter ID:

EPDNEW_C4368

Type:

single initiation site

Name:

TACR1_1

Description:

tachykinin receptor 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	17	48,037,393 - 48,037,453	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000008184	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030017843	UniProtKB/Swiss-Prot
	ENSCAFG00040006803	UniProtKB/Swiss-Prot
	ENSCAFG00805023879	UniProtKB/Swiss-Prot
	ENSCAFG00845016647	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSCAFT00000013011.5	UniProtKB/TrEMBL
	ENSCAFT00030032971.1	UniProtKB/Swiss-Prot
	ENSCAFT00040012681.1	UniProtKB/Swiss-Prot
	ENSCAFT00805043218	UniProtKB/Swiss-Prot
	ENSCAFT00845029508	ENTREZGENE
	ENSCAFT00845029508.1	UniProtKB/Swiss-Prot
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	GPCR_Rhodpsn	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	GPCR_Rhodpsn_7TM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Neurokn_rcpt	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	NK1_rcpt	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	cfa:403815	UniProtKB/Swiss-Prot
NCBI Gene	TACR1	ENTREZGENE
PANTHER	G-PROTEIN COUPLED RECEPTOR TKR-1-RELATED	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SUBSTANCE-P RECEPTOR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	7tm_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS	GPCRRHODOPSN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	NEUROKININ1R	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	NEUROKININR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	G_PROTEIN_RECEP_F1_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8C0R0R9	ENTREZGENE
	A0A8P0SDI4	ENTREZGENE, UniProtKB/TrEMBL
	NK1R_CANLF	UniProtKB/Swiss-Prot, ENTREZGENE
VGNC ID	VGNC:47066	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI