HSD17B7 (hydroxysteroid 17-beta dehydrogenase 7)

Gene: HSD17B7 (hydroxysteroid 17-beta dehydrogenase 7) Canis lupus familiaris

Analyze

Symbol:

HSD17B7

Name:

hydroxysteroid 17-beta dehydrogenase 7

RGD ID:

12185507

Description:

ENCODES a protein that exhibits prolactin receptor binding (ortholog); INVOLVED IN brain development (ortholog); cell differentiation (ortholog); cholesterol biosynthetic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); parathyroid carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

3-keto-steroid reductase; 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	19,975,935 - 19,999,077 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	19,977,086 - 19,999,010 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	20,031,119 - 20,054,229 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	20,059,511 - 20,082,663 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	38	20,058,310 - 20,082,624 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	38	20,034,574 - 20,057,608 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	38	20,386,347 - 20,409,416 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	20,677,507 - 20,700,653 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

parathyroid carcinoma (ISO)

polycystic ovary syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

androgen metabolic process (IEA)

brain development (ISO)

cell differentiation (ISO)

cholesterol biosynthetic process (IEA,ISO)

embryonic organ development (ISO)

embryonic skeletal system development (ISO)

estrogen biosynthetic process (IEA)

hippocampus development (ISO)

maternal process involved in female pregnancy (ISO)

nervous system development (ISO)

response to estradiol (ISO)

response to organic cyclic compound (ISO)

response to prolactin (ISO)

response to xenobiotic stimulus (ISO)

steroid biosynthetic process (IEA)

Cellular Component

endoplasmic reticulum (ISO)

endoplasmic reticulum membrane (IEA)

membrane (IEA)

Molecular Function

3-keto sterol reductase activity (IEA)

5alpha-androstane-3beta,17beta-diol dehydrogenase activity (IEA)

estradiol 17-beta-dehydrogenase [NAD(P)] activity (IEA)

oxidoreductase activity (IEA)

prolactin receptor binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

alendronate pharmacodynamics pathway (ISO)

cholesterol biosynthetic pathway (ISO)

cholesterol ester storage disease pathway (ISO)

congenital hemidysplasia with ichthyosiform erythroderma and limb defects pathway (ISO)

desmosterolosis pathway (ISO)

hypercholesterolemia pathway (ISO)

ibandronate pharmacodynamics pathway (ISO)

mevalonic aciduria pathway (ISO)

nitrogenous bisphosphonate pharmacodynamics pathway (ISO)

pamidronate pharmacodynamics pathway (ISO)

risedronate pharmacodynamics pathway (ISO)

Smith-Lemli-Opitz Syndrome pathway (ISO)

statin pharmacodynamics pathway (ISO)

Wolman disease pathway (ISO)

X-linked dominant chondrodysplasia punctata 2 pathway (ISO)

zoledronate pharmacodynamics pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

HSD17B7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	19,975,935 - 19,999,077 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	19,977,086 - 19,999,010 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	20,031,119 - 20,054,229 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	20,059,511 - 20,082,663 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	38	20,058,310 - 20,082,624 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	38	20,034,574 - 20,057,608 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	38	20,386,347 - 20,409,416 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	20,677,507 - 20,700,653 (-)	NCBI		UU_Cfam_GSD_1.0

HSD17B7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	162,790,702 - 162,812,823 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	162,790,702 - 162,812,823 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	162,760,492 - 162,782,613 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	161,027,120 - 161,049,232 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	159,492,153 - 159,514,265	NCBI
Celera	1	135,864,558 - 135,886,965 (+)	NCBI		Celera
Cytogenetic Map	1	q23.3	NCBI
HuRef	1	134,005,589 - 134,028,003 (+)	NCBI		HuRef
CHM1_1	1	164,183,061 - 164,205,170 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	162,134,938 - 162,157,387 (+)	NCBI		T2T-CHM13v2.0

Hsd17b7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	169,777,109 - 169,796,757 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	169,777,104 - 169,796,810 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	169,949,535 - 169,969,242 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	169,949,535 - 169,969,241 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	171,879,668 - 171,899,336 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	171,786,212 - 171,805,880 (-)	NCBI		MGSCv36	mm8
Celera	1	172,391,590 - 172,411,249 (-)	NCBI		Celera
Cytogenetic Map	1	H3	NCBI
cM Map	1	76.84	NCBI

Hsd17b7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	84,702,875 - 84,722,810 (-)	NCBI		GRCr8
mRatBN7.2	13	82,170,079 - 82,190,018 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	82,173,179 - 82,190,017 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	84,799,751 - 84,816,641 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	86,093,813 - 86,110,564 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	83,324,993 - 83,341,883 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	88,288,116 - 88,308,019 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	88,288,046 - 88,307,988 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	92,914,581 - 92,934,289 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	85,776,077 - 85,792,977 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	85,790,264 - 85,807,165 (-)	NCBI
Celera	13	81,835,166 - 81,852,028 (-)	NCBI		Celera
Cytogenetic Map	13	q24	NCBI

Hsd17b7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955462	13,557,292 - 13,574,593 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955462	13,555,488 - 13,574,506 (-)	NCBI	ChiLan1.0	ChiLan1.0

LOC100985156
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	51,005,870 - 51,028,676 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	51,011,219 - 51,034,004 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	38,424,713 - 38,447,193 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	142,001,063 - 142,017,150 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	142,001,162 - 142,022,865 (+)	Ensembl	panpan1.1		panPan2

Hsd17b7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	8,635,691 - 8,660,282 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936831	951,562 - 977,208 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936831	951,603 - 976,159 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HSD17B7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	87,720,118 - 87,742,992 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	87,720,747 - 87,743,037 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	95,571,675 - 95,593,948 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

HSD17B7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	1,271,259 - 1,289,232 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	1,273,052 - 1,288,930 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	290,535 - 308,235 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Hsd17b7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624826	1,260,223 - 1,283,741 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624826	1,260,133 - 1,287,565 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in HSD17B7
498 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	2		16	4		4	6		12		10	1
Low	3	5	6	2	6	2		6		8		5
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014111263	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014111264	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014111266	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038448564	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038448565	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038448566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038586241	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038586242	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038586243	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038650657	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038650658	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038650659	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_846605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001315504	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002623814	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002623815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002623816	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005308903	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005308904	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005308905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005308906	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005351797	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005351798	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005351799	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005351800	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005385788	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005385789	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005385790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005385791	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005419548	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005419549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005419550	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005419551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000087	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000020975 ⟹ ENSCAFP00000019475

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	38	19,977,086 - 19,999,010 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000059680 ⟹ ENSCAFP00000065581

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	38	19,977,086 - 19,997,576 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000076435 ⟹ ENSCAFP00000045586

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	38	19,990,908 - 19,999,010 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000077596 ⟹ ENSCAFP00000064423

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	38	19,997,297 - 19,999,010 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845046282 ⟹ ENSCAFP00845036347

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	38	20,058,310 - 20,082,597 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845046361 ⟹ ENSCAFP00845036406

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	38	20,058,310 - 20,081,166 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845046468 ⟹ ENSCAFP00845036481

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	38	20,059,514 - 20,082,619 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845046530 ⟹ ENSCAFP00845036528

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	38	20,080,887 - 20,082,624 (-)	Ensembl

RefSeq Acc Id:

XM_014111264 ⟹ XP_013966739

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	19,985,065 - 19,999,077 (-)	NCBI
Dog10K_Boxer_Tasha	38	20,040,261 - 20,054,229 (-)	NCBI

Sequence:

show sequence

CGTGGGCGTGGCCTCGGCGGGCGCCGGCCTCCGCTGCCCGGGAGGGAGGCGGAGACGGCGGCGG
CGGCGGCGGGAGGCCATGCGGAAGGTGGTGTTGGTCACGGGGGCCAGCAGTGGCGTGGGCCTCG
CGCTCTGCAAGCGGCTGCTGGAGGAGGACGACGAGCTGCACGTGTGTTTGGCATGCAGGAACGT
GAGCAAAGCGGAAGCTGTCAGCGCTGATCTGCTGGCTTCTCACCCCGCCGCCGAGGTCAGCATC
GTGCAGGTGGATGTCAGCAACCTGCAGTCGGTCATCCGGGCCTCCAGCGAGCTCAAGCAAAGGT
TTCAGAGATTAGACTACGTCTATCTGAACGCTGGGATCATGCCCAATCCACAGCTGAATATCAA
AGCACTTTTCTGTGGCCTCTTTTCAAGAAAAGTGATTCATATGTTCTCCACAGCTGAAGGATTG
CTGACCCAGGAAGACAAAGTCACTGCCGATGGCCTCCAGGAGGTCTTTGAAACCAACGTCTTTG
GCCACTTTATTCTGATTCAGGAACTGGAACCTCTTCTCTGTCACAGGGACAGTCCCTCCCAGCT
CATCTGGACATCGTCTCGCAATGCAAGGAAATCTAATTTCCACCTTGAGGACATCCAGCACAGC
AGAGGCCAGGAGCCTTACAGCTCCTCCAAATATGCAGTTGACCTGCTGAGTGTGGCGCTGAACC
GGAACTTCAACCCACGGCGCTTCTCATAGTGAGTCCTCCGTGCGTGACTCTCTCACCGAGTGGC
TCGCGCAGCTTGGGGCAGCCCAGAGCATCTGTGCTTCGTGCCCTGGCGTCCTGGCTCATCTGCA
CGCCCTCTTTACTCACACGCGTCCTGGTGGCCTGGCTCAGTACACACTGAGTT

hide sequence

RefSeq Acc Id:

XM_014111266 ⟹ XP_013966741

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	19,985,061 - 19,999,077 (-)	NCBI
Dog10K_Boxer_Tasha	38	20,040,258 - 20,054,229 (-)	NCBI

Sequence:

show sequence

CGTGGGCGTGGCCTCGGCGGGCGCCGGCCTCCGCTGCCCGGGAGGGAGGCGGAGACGGCGGCGG
CGGCGGCGGGAGGCCATGCGGAAGGTGGTGTTGGTCACGGGGGCCAGCAGTGGCGTGGGCCTCG
CGCTCTGCAAGCGGCTGCTGGAGGAGGACGACGAGCTGCACGTGTGTTTGGCATGCAGGAACGT
GAGCAAAGCGGAAGCTGTCAGCGCTGATCTGCTGGCTTCTCACCCCGCCGCCGAGGTCAGCATC
GTGCAGGTGGATGTCAGCAACCTGCAGTCGGTCATCCGGGCCTCCAGCGAGCTCAAGCAAAGGT
TTCAGAGATTAGACTACGTCTATCTGAACGCTGGGATCATGCCCAATCCACAGCTGAATATCAA
AGCACTTTTCTGTGGCCTCTTTTCAAGATTCAGGAACTGGAACCTCTTCTCTGTCACAGGGACA
GTCCCTCCCAGCTCATCTGGACATCGTCTCGCAATGCAAGGAAATCTAATTTCCACCTTGAGGA
CATCCAGCACAGCAGAGGCCAGGAGCCTTACAGCTCCTCCAAATATGCAGTTGACCTGCTGAGT
GTGGCGCTGAACCGGAACTTCAACCCACGGCGCTTCTCATAGTGAGTCCTCCGTGCGTGACTCT
CTCACCGAGTGGCTCGCGCAGCTTGGGGCAGCCCAGAGCATCTGTGCTTCGTGCCCTGGCGTCC
TGGCTCATCTGCACGCCCTCTTTACTCACACGCGTCCTGGTGGCCTGGCTCAGTACACACTGAG
TTTGAG

hide sequence

RefSeq Acc Id:

XM_038448564 ⟹ XP_038304492

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	20,059,511 - 20,082,663 (-)	NCBI

RefSeq Acc Id:

XM_038448565 ⟹ XP_038304493

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	20,068,672 - 20,082,663 (-)	NCBI

RefSeq Acc Id:

XM_038448566 ⟹ XP_038304494

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	20,068,669 - 20,082,663 (-)	NCBI

RefSeq Acc Id:

XM_038522451 ⟹ XP_038378379

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	20,034,574 - 20,057,608 (-)	NCBI

RefSeq Acc Id:

XM_038522452 ⟹ XP_038378380

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	20,043,713 - 20,057,608 (-)	NCBI

RefSeq Acc Id:

XM_038522454 ⟹ XP_038378382

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	20,043,710 - 20,057,608 (-)	NCBI

RefSeq Acc Id:

XM_038586241 ⟹ XP_038442169

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	20,677,507 - 20,700,653 (-)	NCBI

RefSeq Acc Id:

XM_038586242 ⟹ XP_038442170

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	20,686,655 - 20,700,653 (-)	NCBI

RefSeq Acc Id:

XM_038586243 ⟹ XP_038442171

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	20,686,653 - 20,700,653 (-)	NCBI

RefSeq Acc Id:

XM_038650657 ⟹ XP_038506585

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	20,386,347 - 20,409,416 (-)	NCBI

RefSeq Acc Id:

XM_038650658 ⟹ XP_038506586

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	20,395,493 - 20,409,416 (-)	NCBI

RefSeq Acc Id:

XM_038650659 ⟹ XP_038506587

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	20,395,495 - 20,409,416 (-)	NCBI

RefSeq Acc Id:

XM_846605 ⟹ XP_851698

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	19,975,935 - 19,999,077 (-)	NCBI
Dog10K_Boxer_Tasha	38	20,031,119 - 20,054,229 (-)	NCBI

Sequence:

show sequence

CGTGGGCGTGGCCTCGGCGGGCGCCGGCCTCCGCTGCCCGGGAGGGAGGCGGAGACGGCGGCGG
CGGCGGCGGGAGGCCATGCGGAAGGTGGTGTTGGTCACGGGGGCCAGCAGTGGCGTGGGCCTCG
CGCTCTGCAAGCGGCTGCTGGAGGAGGACGACGAGCTGCACGTGTGTTTGGCATGCAGGAACGT
GAGCAAAGCGGAAGCTGTCAGCGCTGATCTGCTGGCTTCTCACCCCGCCGCCGAGGTCAGCATC
GTGCAGGTGGATGTCAGCAACCTGCAGTCGGTCATCCGGGCCTCCAGCGAGCTCAAGCAAAGGT
TTCAGAGATTAGACTACGTCTATCTGAACGCTGGGATCATGCCCAATCCACAGCTGAATATCAA
AGCACTTTTCTGTGGCCTCTTTTCAAGAAAAGTGATTCATATGTTCTCCACAGCTGAAGGATTG
CTGACCCAGGAAGACAAAGTCACTGCCGATGGCCTCCAGGAGGTCTTTGAAACCAACGTCTTTG
GCCACTTTATTCTGATTCAGGAACTGGAACCTCTTCTCTGTCACAGGGACAGTCCCTCCCAGCT
CATCTGGACATCGTCTCGCAATGCAAGGAAATCTAATTTCCACCTTGAGGACATCCAGCACAGC
AGAGGCCAGGAGCCTTACAGCTCCTCCAAATATGCAGTTGACCTGCTGAGTGTGGCGCTGAACC
GGAACTTCAACCCACGGGGTCTGTACTCCAGCGTGGTGTGCCCGGGTACGATGGTGACCAACAT
GACCTACGGGATTCTCCCTCCCTTGGTGTGGACGCTGCTGCTGCCAATCATATGGCTGCTTCGC
TTTTTTGCAAATGCTTTCACTTTGACGCCGTACAATGGAACAGAAGCCCTGGTATGGCTTTTCC
ACCAAAAGCCGGAGTCTCTAAATCCTCTGACCAAATACCTGAGTGCCACCACTGGCTTTGGAAG
CAATTATGTAGCGACCCAGAAGATGGACCTAGATGAAGACACTGCTGAAAAATTTTACCAAAAC
TTACTGGAACTGGAAAAGCGTGTTAGGGTCACCATTCAAAAAACATAATCAGAGCTGACGATGA
CAGTGTCTGAAATCTGAAACATCGCACACCTGCTGTGCTTTCTGGGTTTTTGTGGAGTTGGATG
ATGTGCATTTGTGGTAGACAGTGAGCTATAATTGTCTCTTTTCCTTCCTGTCAGGATTATCTCT
AGGATTACGGGTGCATCTGTATATAAACAGGAGAAAAAGATCGATAAGTAAAATACGACTTAGA
GGTTCTCCAGAATGGTGTCACATCAGAGTTGTGCTAGAGTCACCCGACCAAGTGTGTGCTTATT
GGTTCTGACAACTGGATCCCAAGCTCCACCTCAGGTAGAGGTGACCCAGGCACTCACTGGTCCT
CCTTTTGGCCTGGCCCCTCTCTGAGTGGTAATCTGAGCTTTGTTCCTTTTTTTTATGGACAGTT
TTCTTAGGTCTTATACCTTATTTCTTCCTCCACGGGGTGTTTCTAAAAATCCTCAGATTGTGGG
GTGTCTGAATAACTCTGTTAGGCGTCCGACTCTTGATTTCCACTCAGGTCATGATCTCACGGTT
GTGAAATCGAGCCCTGAGTCAGGCTTTGTGCTCTGTGCAGGGTCTACTTGGGATTCTCTCTCTC
TGCCCCTCCCCCTGCTCACGTGTACTCTCACTCTCTTTCTCTCAAATAAATAAATAGAATCTTT
AAAAATCCTGAGATTGTTAGACTCCTAACAGACCTAATACAGATATCCATGTAGTTCATCACAG
GAACAGAAGAATATATATGTTTGGGATACTGGAATTTTTTCTTATTTTGAAAGTATCTTTCATT
GATGTTGAGGTAGTCAGTGTTAATATTGGGCTTGACCTTTAACACCATTTGCAAATGTGTTCAT
TGCTGACCAACCTGTTTTTCATGATTGTATTTTAATGTATGCAAACTTGCAGGAAAAACTATTT
ACTCACATTGTTTCAAGGAAGTTTTCCAATCGAATAATTGCTGGCGGGATATCTGCTGGTATCA
GTAGTGGTCGGAGGTGGTTAAGACTTAGTTTGTATGATATGAAGACAGGATGCTAAAATGCCTG
AATGTTTTTAACCCTAAATATAACCACTATGCCCAGAATATAAGAAAGTGGGCGAAATCTTGAA
CGATTTAATAAAAGTCAAAAGTTGCATAGAAATACAGTTTCTATACATATTCTGTATGAGTTTC
TGGTTATAGTTTCTCAAATTTTGTTGCTAAAGATATTTTTAATAAAGTTGAGCATTCCGTATGT
GCAAACGGGCGGTGAGGTTGGGGAGCTGAGAGCAGCTCCAGGTTGTGCTCTTGCGATCACTCAC
CCTGCAGGTTTGCGAGAAGCACTTTACTGTGAATCCCAGGCTTCTCCTCTGTAAAGTGGAGTCC
TTCTCTTTCTGCTCCTGGGTGTGGAGGAACATTAAATGCAATAATACGTGTGAATGAATAAAGA
GCATTTTTGAGAATGA

hide sequence

RefSeq Acc Id:

XR_001315504

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	19,975,935 - 19,999,077 (-)	NCBI
Dog10K_Boxer_Tasha	38	20,031,119 - 20,054,229 (-)	NCBI

Sequence:

show sequence

CGTGGGCGTGGCCTCGGCGGGCGCCGGCCTCCGCTGCCCGGGAGGGAGGCGGAGACGGCGGCGG
CGGCGGCGGGAGGCCATGCGGAAGGTGGTGTTGGTCACGGGGGCCAGCAGTGGCGTGGGCCTCG
CGCTCTGCAAGCGGCTGCTGGAGGAGGACGACGAGCTGCACGTGTGTTTGGCATGCAGGAACGT
GAGCAAAGCGGAAGCTGTCAGCGCTGATCTGCTGGCTTCTCACCCCGCCGCCGAGGTCAGCATC
GTGCAGGTGGATGTCAGCAACCTGCAGTCGGTCATCCGGGCCTCCAGCGAGCTCAAGCAAAGGT
TTCAGAGATTAGACTACGTCTATCTGAACGCTGGGATCATGCCCAATCCACAGCTGAATATCAA
AGCACTTTTCTGTGGCCTCTTTTCAAGATTCAGGAACTGGAACCTCTTCTCTGTCACAGGGACA
GTCCCTCCCAGCTCATCTGGACATCGTCTCGCAATGCAAGGAAATCTAATTTCCACCTTGAGGA
CATCCAGCACAGCAGAGGCCAGGAGCCTTACAGCTCCTCCAAATATGCAGTTGACCTGCTGAGT
GTGGCGCTGAACCGGAACTTCAACCCACGGGGTCTGTACTCCAGCGTGGTGTGCCCGGGTACGA
TGGTGACCAACATGACCTACGGGATTCTCCCTCCCTTGGTGTGGACGCTGCTGCTGCCAATCAT
ATGGCTGCTTCGCTTTTTTGCAAATGCTTTCACTTTGACGCCGTACAATGGAACAGAAGCCCTG
GTATGGCTTTTCCACCAAAAGCCGGAGTCTCTAAATCCTCTGACCAAATACCTGAGTGCCACCA
CTGGCTTTGGAAGCAATTATGTAGCGACCCAGAAGATGGACCTAGATGAAGACACTGCTGAAAA
ATTTTACCAAAACTTACTGGAACTGGAAAAGCGTGTTAGGGTCACCATTCAAAAAACATAATCA
GAGCTGACGATGACAGTGTCTGAAATCTGAAACATCGCACACCTGCTGTGCTTTCTGGGTTTTT
GTGGAGTTGGATGATGTGCATTTGTGGTAGACAGTGAGCTATAATTGTCTCTTTTCCTTCCTGT
CAGGATTATCTCTAGGATTACGGGTGCATCTGTATATAAACAGGAGAAAAAGATCGATAAGTAA
AATACGACTTAGAGGTTCTCCAGAATGGTGTCACATCAGAGTTGTGCTAGAGTCACCCGACCAA
GTGTGTGCTTATTGGTTCTGACAACTGGATCCCAAGCTCCACCTCAGGTAGAGGTGACCCAGGC
ACTCACTGGTCCTCCTTTTGGCCTGGCCCCTCTCTGAGTGGTAATCTGAGCTTTGTTCCTTTTT
TTTATGGACAGTTTTCTTAGGTCTTATACCTTATTTCTTCCTCCACGGGGTGTTTCTAAAAATC
CTCAGATTGTGGGGTGTCTGAATAACTCTGTTAGGCGTCCGACTCTTGATTTCCACTCAGGTCA
TGATCTCACGGTTGTGAAATCGAGCCCTGAGTCAGGCTTTGTGCTCTGTGCAGGGTCTACTTGG
GATTCTCTCTCTCTGCCCCTCCCCCTGCTCACGTGTACTCTCACTCTCTTTCTCTCAAATAAAT
AAATAGAATCTTTAAAAATCCTGAGATTGTTAGACTCCTAACAGACCTAATACAGATATCCATG
TAGTTCATCACAGGAACAGAAGAATATATATGTTTGGGATACTGGAATTTTTTCTTATTTTGAA
AGTATCTTTCATTGATGTTGAGGTAGTCAGTGTTAATATTGGGCTTGACCTTTAACACCATTTG
CAAATGTGTTCATTGCTGACCAACCTGTTTTTCATGATTGTATTTTAATGTATGCAAACTTGCA
GGAAAAACTATTTACTCACATTGTTTCAAGGAAGTTTTCCAATCGAATAATTGCTGGCGGGATA
TCTGCTGGTATCAGTAGTGGTCGGAGGTGGTTAAGACTTAGTTTGTATGATATGAAGACAGGAT
GCTAAAATGCCTGAATGTTTTTAACCCTAAATATAACCACTATGCCCAGAATATAAGAAAGTGG
GCGAAATCTTGAACGATTTAATAAAAGTCAAAAGTTGCATAGAAATACAGTTTCTATACATATT
CTGTATGAGTTTCTGGTTATAGTTTCTCAAATTTTGTTGCTAAAGATATTTTTAATAAAGTTGA
GCATTCCGTATGTGCAAACGGGCGGTGAGGTTGGGGAGCTGAGAGCAGCTCCAGGTTGTGCTCT
TGCGATCACTCACCCTGCAGGTTTGCGAGAAGCACTTTACTGTGAATCCCAGGCTTCTCCTCTG
TAAAGTGGAGTCCTTCTCTTTCTGCTCCTGGGTGTGGAGGAACATTAAATGCAATAATACGTGT
GAATGAATAAAGAGCATTTTTGAGAATGA

hide sequence

RefSeq Acc Id:

XR_002623814

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	19,984,926 - 19,999,077 (-)	NCBI
Dog10K_Boxer_Tasha	38	20,040,109 - 20,054,229 (-)	NCBI

Sequence:

show sequence

CGTGGGCGTGGCCTCGGCGGGCGCCGGCCTCCGCTGCCCGGGAGGGAGGCGGAGACGGCGGCGG
CGGCGGCGGGAGGCCATGCGGAAGGTGGTGTTGGTCACGGGGGCCAGCAGTGGCGTGGGCCTCG
CGCTCTGCAAGCGGCTGCTGGAGGAGGACGACGAGCTGCACGTGTGTTTGGCATGCAGGAACGT
GAGCAAAGCGGAAGCTGTCAGCGCTGATCTGCTGGCTTCTCACCCCGCCGCCGAGGTCAGCATC
GTGCAGGTGGATGTCAGCAACCTGCAGTCGGTCATCCGGGCCTCCAGCGAGCTCAAGCAAAGGT
TTCAGAGATTAGACTACGTCTATCTGAACGCTGGGATCATGCCCAATCCACAGCTGAATATCAA
AGCACTTTTCTGTGGCCTCTTTTCAAGAAAAGTGATTCATATGTTCTCCACAGCTGAAGGATTG
CTGACCCAGGAAGACAAAGTCACTGCCGATGGCCTCCAGGAGGTCTTTGAAACCAACGTCTTTG
GCCACTTTATTCTGGGACAGTCCCTCCCAGCTCATCTGGACATCGTCTCGCAATGCAAGGAAAT
CTAATTTCCACCTTGAGGACATCCAGCACAGCAGAGGCCAGGAGCCTTACAGCTCCTCCAAATA
TGCAGTTGACCTGCTGAGTGTGGCGCTGAACCGGAACTTCAACCCACGGGGTCTGTACTCCAGC
GTGGTGTGCCCGGGTACGATGGTGACCAACATGACCTACGGGATTCTCCCTCCCTTGGTGTGGA
CGCTGCTGCTGCCAATCATATGGCTG

hide sequence

RefSeq Acc Id:

XR_002623815

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	19,985,061 - 19,999,077 (-)	NCBI
Dog10K_Boxer_Tasha	38	20,040,260 - 20,054,229 (-)	NCBI

Sequence:

show sequence

CGTGGGCGTGGCCTCGGCGGGCGCCGGCCTCCGCTGCCCGGGAGGGAGGCGGAGACGGCGGCGG
CGGCGGCGGGAGGCCATGCGGAAGGTGGTGTTGGTCACGGGGGCCAGCAGTGGCGTGGGCCTCG
CGCTCTGCAAGCGGCTGCTGGAGGAGGACGACGAGCTGCACGTGTGTTTGGCATGCAGGAACGT
GAGCAAAGCGGAAGCTGTCAGCGCTGATCTGCTGGCTTCTCACCCCGCCGCCGAGGTCAGCATC
GTGCAGGTGGATGTCAGCAACCTGCAGTCGGTCATCCGGGCCTCCAGCGAGCTCAAGCAAAGGT
TTCAGAGATTAGACTACGTCTATCTGAACGCTGGGATCATGCCCAATCCACAGCTGAATATCAA
AGCACTTTTCTGTGGCCTCTTTTCAAGAAAAGTGATTCATATGTTCTCCACAGCTGAAGGATTG
CTGACCCAGGAAGACAAAGTCACTGCCGATGGCCTCCAGGAGGTCTTTGAAACCAACGTCTTTG
GCCACTTTATTCTGGGACAGTCCCTCCCAGCTCATCTGGACATCGTCTCGCAATGCAAGGAAAT
CTAATTTCCACCTTGAGGACATCCAGCACAGCAGAGGCCAGGAGCCTTACAGCTCCTCCAAATA
TGCAGTTGACCTGCTGAGTGTGGCGCTGAACCGGAACTTCAACCCACGGCGCTTCTCATAGTGA
GTCCTCCGTGCGTGACTCTCTCACCGAGTGGCTCGCGCAGCTTGGGGCAGCCCAGAGCATCTGT
GCTTCGTGCCCTGGCGTCCTGGCTCATCTGCACGCCCTCTTTACTCACACGCGTCCTGGTGGCC
TGGCTCAGTACACACTGAGTTTGAG

hide sequence

RefSeq Acc Id:

XR_002623816

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	19,988,326 - 19,999,077 (-)	NCBI
Dog10K_Boxer_Tasha	38	20,043,475 - 20,054,229 (-)	NCBI

Sequence:

show sequence

CGTGGGCGTGGCCTCGGCGGGCGCCGGCCTCCGCTGCCCGGGAGGGAGGCGGAGACGGCGGCGG
CGGCGGCGGGAGGCCATGCGGAAGGTGGTGTTGGTCACGGGGGCCAGCAGTGGCGTGGGCCTCG
CGCTCTGCAAGCGGCTGCTGGAGGAGGACGACGAGCTGCACGTGTGTTTGGCATGCAGGAACGT
GAGCAAAGCGGAAGCTGTCAGCGCTGATCTGCTGGCTTCTCACCCCGCCGCCGAGGTCAGCATC
GTGCAGGTGGATGTCAGCAACCTGCAGTCGGTCATCCGGGCCTCCAGCGAGCTCAAGCAAAGGT
TTCAGAGATTAGACTACGTCTATCTGAACGCTGGGATCATGCCCAATCCACAGCTGAATATCAA
AGCACTTTTCTGTGGCCTCTTTTCAAGCTGAAGGATTGCTGACCCAGGAAGACAAAGTCACTGC
CGATGGCCTCCAGGAGGTCTTTGAAACCAACGTCTTTGGCCACTTTATTCTGATTCAGGAACTG
GAACCTC

hide sequence

RefSeq Acc Id:

XR_005308903

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	20,068,519 - 20,082,663 (-)	NCBI

RefSeq Acc Id:

XR_005308904

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	20,068,670 - 20,082,663 (-)	NCBI

RefSeq Acc Id:

XR_005308905

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	20,059,511 - 20,082,663 (-)	NCBI

RefSeq Acc Id:

XR_005308906

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	20,071,884 - 20,082,663 (-)	NCBI

RefSeq Acc Id:

XR_005351797

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	20,043,560 - 20,057,608 (-)	NCBI

RefSeq Acc Id:

XR_005351798

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	20,043,711 - 20,057,608 (-)	NCBI

RefSeq Acc Id:

XR_005351799

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	20,034,574 - 20,057,608 (-)	NCBI

RefSeq Acc Id:

XR_005351800

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	20,046,925 - 20,057,608 (-)	NCBI

RefSeq Acc Id:

XR_005385788

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	20,686,503 - 20,700,653 (-)	NCBI

RefSeq Acc Id:

XR_005385789

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	20,686,654 - 20,700,653 (-)	NCBI

RefSeq Acc Id:

XR_005385790

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	20,677,507 - 20,700,653 (-)	NCBI

RefSeq Acc Id:

XR_005385791

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	20,689,874 - 20,700,653 (-)	NCBI

RefSeq Acc Id:

XR_005419548

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	20,395,341 - 20,409,416 (-)	NCBI

RefSeq Acc Id:

XR_005419549

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	20,395,497 - 20,409,416 (-)	NCBI

RefSeq Acc Id:

XR_005419550

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	20,386,347 - 20,409,416 (-)	NCBI

RefSeq Acc Id:

XR_005419551

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	20,398,706 - 20,409,416 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_013966739	(Get FASTA)	NCBI Sequence Viewer
	XP_013966741	(Get FASTA)	NCBI Sequence Viewer
	XP_038304492	(Get FASTA)	NCBI Sequence Viewer
	XP_038304493	(Get FASTA)	NCBI Sequence Viewer
	XP_038304494	(Get FASTA)	NCBI Sequence Viewer
	XP_038378379	(Get FASTA)	NCBI Sequence Viewer
	XP_038378380	(Get FASTA)	NCBI Sequence Viewer
	XP_038378382	(Get FASTA)	NCBI Sequence Viewer
	XP_038442169	(Get FASTA)	NCBI Sequence Viewer
	XP_038442170	(Get FASTA)	NCBI Sequence Viewer
	XP_038442171	(Get FASTA)	NCBI Sequence Viewer
	XP_038506585	(Get FASTA)	NCBI Sequence Viewer
	XP_038506586	(Get FASTA)	NCBI Sequence Viewer
	XP_038506587	(Get FASTA)	NCBI Sequence Viewer
	XP_851698	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000019475.3
	ENSCAFP00000064423.1
	ENSCAFP00000065581.1
	ENSCAFP00000068009.1
	ENSCAFP00030036464.1
	ENSCAFP00030036507.1
	ENSCAFP00040015880.1
	ENSCAFP00040015963.1
	ENSCAFP00040016031.1
	ENSCAFP00040016075.1
	ENSCAFP00845036347
	ENSCAFP00845036347.1
	ENSCAFP00845036406.1
	ENSCAFP00845036481
	ENSCAFP00845036481.1
	ENSCAFP00845036528.1

RefSeq Acc Id:	XP_851698 ⟸ XM_846605
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0JKH1 (UniProtKB/TrEMBL), A0A8C0S4I9 (UniProtKB/TrEMBL), A0A8I3SA02 (UniProtKB/TrEMBL), A0A8C0RRG6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRKVVLVTGASSGVGLALCKRLLEEDDELHVCLACRNVSKAEAVSADLLASHPAAEVSIVQVDV SNLQSVIRASSELKQRFQRLDYVYLNAGIMPNPQLNIKALFCGLFSRKVIHMFSTAEGLLTQED KVTADGLQEVFETNVFGHFILIQELEPLLCHRDSPSQLIWTSSRNARKSNFHLEDIQHSRGQEP YSSSKYAVDLLSVALNRNFNPRGLYSSVVCPGTMVTNMTYGILPPLVWTLLLPIIWLLRFFANA FTLTPYNGTEALVWLFHQKPESLNPLTKYLSATTGFGSNYVATQKMDLDEDTAEKFYQNLLELE KRVRVTIQKT hide sequence

RefSeq Acc Id:	XP_013966741 ⟸ XM_014111266
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3S5V3 (UniProtKB/TrEMBL), A0A8P0NF84 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRKVVLVTGASSGVGLALCKRLLEEDDELHVCLACRNVSKAEAVSADLLASHPAAEVSIVQVDV SNLQSVIRASSELKQRFQRLDYVYLNAGIMPNPQLNIKALFCGLFSRFRNWNLFSVTGTVPPSS SGHRLAMQGNLISTLRTSSTAEARSLTAPPNMQLTC hide sequence

RefSeq Acc Id:

XP_013966739 ⟸ XM_014111264

- Peptide Label:

isoform X2

- Sequence:

show sequence

MRKVVLVTGASSGVGLALCKRLLEEDDELHVCLACRNVSKAEAVSADLLASHPAAEVSIVQVDV
SNLQSVIRASSELKQRFQRLDYVYLNAGIMPNPQLNIKALFCGLFSRKVIHMFSTAEGLLTQED
KVTADGLQEVFETNVFGHFILIQELEPLLCHRDSPSQLIWTSSRNARKSNFHLEDIQHSRGQEP
YSSSKYAVDLLSVALNRNFNPRRFS

hide sequence

RefSeq Acc Id:

ENSCAFP00000019475 ⟸ ENSCAFT00000020975

RefSeq Acc Id:

ENSCAFP00000065581 ⟸ ENSCAFT00000059680

RefSeq Acc Id:

ENSCAFP00000064423 ⟸ ENSCAFT00000077596

RefSeq Acc Id:

ENSCAFP00000045586 ⟸ ENSCAFT00000076435

RefSeq Acc Id:	XP_038378379 ⟸ XM_038522451
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038378382 ⟸ XM_038522454
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038378380 ⟸ XM_038522452
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038506585 ⟸ XM_038650657
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038506586 ⟸ XM_038650658
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038506587 ⟸ XM_038650659
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038304492 ⟸ XM_038448564
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0JKH1 (UniProtKB/TrEMBL), A0A8C0S4I9 (UniProtKB/TrEMBL), A0A8I3SA02 (UniProtKB/TrEMBL), A0A8C0RRG6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038304494 ⟸ XM_038448566
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3S5V3 (UniProtKB/TrEMBL), A0A8P0NF84 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038304493 ⟸ XM_038448565
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038442169 ⟸ XM_038586241
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0RRG6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038442171 ⟸ XM_038586243
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038442170 ⟸ XM_038586242
- Peptide Label:	isoform X2

RefSeq Acc Id:

ENSCAFP00845036528 ⟸ ENSCAFT00845046530

RefSeq Acc Id:

ENSCAFP00845036347 ⟸ ENSCAFT00845046282

RefSeq Acc Id:

ENSCAFP00845036406 ⟸ ENSCAFT00845046361

RefSeq Acc Id:

ENSCAFP00845036481 ⟸ ENSCAFT00845046468

Promoters

RGD ID:

13689210

Promoter ID:

EPDNEW_C7277

Type:

initiation region

Name:

HSD17B7_1

Description:

hydroxysteroid 17-beta dehydrogenase 7

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	19,999,027 - 19,999,087	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000013211	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030022742	UniProtKB/TrEMBL
	ENSCAFG00040009870	UniProtKB/TrEMBL
	ENSCAFG00845026233	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000020975.4	UniProtKB/TrEMBL
	ENSCAFT00000059680.2	UniProtKB/TrEMBL
	ENSCAFT00000077596.2	UniProtKB/TrEMBL
	ENSCAFT00000096301.1	UniProtKB/TrEMBL
	ENSCAFT00030041800.1	UniProtKB/TrEMBL
	ENSCAFT00030041846.1	UniProtKB/TrEMBL
	ENSCAFT00040018294.1	UniProtKB/TrEMBL
	ENSCAFT00040018381.1	UniProtKB/TrEMBL
	ENSCAFT00040018471.1	UniProtKB/TrEMBL
	ENSCAFT00040018525.1	UniProtKB/TrEMBL
	ENSCAFT00845046282	ENTREZGENE
	ENSCAFT00845046282.1	UniProtKB/TrEMBL
	ENSCAFT00845046361.1	UniProtKB/TrEMBL
	ENSCAFT00845046468	ENTREZGENE
	ENSCAFT00845046468.1	UniProtKB/TrEMBL
	ENSCAFT00845046530.1	UniProtKB/TrEMBL
Gene3D-CATH	NAD(P)-binding Rossmann-like Domain	UniProtKB/TrEMBL
InterPro	HSD17B7/Erg27	UniProtKB/TrEMBL
	NAD(P)-bd_dom_sf	UniProtKB/TrEMBL
	SDR_fam	UniProtKB/TrEMBL
NCBI Gene	HSD17B7	ENTREZGENE
PANTHER	3-KETO-STEROID REDUCTASE	UniProtKB/TrEMBL
	3-KETO-STEROID REDUCTASE/17-BETA-HYDROXYSTEROID DEHYDROGENASE 7	UniProtKB/TrEMBL
Pfam	adh_short	UniProtKB/TrEMBL
PRINTS	GDHRDH	UniProtKB/TrEMBL
Superfamily-SCOP	SSF51735	UniProtKB/TrEMBL
UniProt	A0A8C0JKH1	ENTREZGENE
	A0A8C0PGZ3_CANLF	UniProtKB/TrEMBL
	A0A8C0RRG6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0S4I9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0S575_CANLF	UniProtKB/TrEMBL
	A0A8C0YTX5_CANLF	UniProtKB/TrEMBL
	A0A8I3Q973_CANLF	UniProtKB/TrEMBL
	A0A8I3S5V3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3SA02	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3SA37_CANLF	UniProtKB/TrEMBL
	A0A8P0NF84	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:41809	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Annotations - SMPDB

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Imported Disease Annotations - ClinVar

Imported Annotations - SMPDB