ACSL1 (acyl-CoA synthetase long chain family member 1) - Rat Genome Database

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Gene: ACSL1 (acyl-CoA synthetase long chain family member 1) Canis lupus familiaris
Analyze
Symbol: ACSL1
Name: acyl-CoA synthetase long chain family member 1
RGD ID: 12123831
Description: ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); oleoyl-CoA ligase activity (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); fatty acid metabolic process (ortholog); fatty acid transport (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine palmitoyltransferase I deficiency pathway; carnitine-acylcarnitine translocase deficiency; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN mitochondrial outer membrane (ortholog); peroxisomal membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: acyl-CoA synthetase long-chain family member 1; long-chain-fatty-acid--CoA ligase 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11645,735,675 - 45,806,235 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1645,735,703 - 45,804,970 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1646,229,060 - 46,299,523 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01647,951,751 - 48,022,201 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1647,951,663 - 48,216,959 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11645,918,792 - 45,989,322 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01646,531,804 - 46,602,185 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01646,664,118 - 46,734,659 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ACSL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11645,735,675 - 45,806,235 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1645,735,703 - 45,804,970 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1646,229,060 - 46,299,523 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01647,951,751 - 48,022,201 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1647,951,663 - 48,216,959 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11645,918,792 - 45,989,322 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01646,531,804 - 46,602,185 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01646,664,118 - 46,734,659 (+)NCBIUU_Cfam_GSD_1.0
ACSL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384184,755,595 - 184,826,594 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4184,755,595 - 184,826,818 (-)EnsemblGRCh38hg38GRCh38
GRCh374185,676,749 - 185,747,122 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364185,913,743 - 185,984,209 (-)NCBINCBI36Build 36hg18NCBI36
Build 344186,051,898 - 186,122,364NCBI
Celera4183,005,275 - 183,075,742 (-)NCBICelera
Cytogenetic Map4q35.1NCBI
HuRef4181,430,075 - 181,478,058 (-)NCBIHuRef
CHM1_14185,652,944 - 185,723,638 (-)NCBICHM1_1
T2T-CHM13v2.04188,099,036 - 188,170,021 (-)NCBIT2T-CHM13v2.0
Acsl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39846,924,214 - 46,989,088 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl846,924,074 - 46,989,088 (+)EnsemblGRCm39 Ensembl
GRCm38846,471,037 - 46,536,051 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl846,471,037 - 46,536,051 (+)EnsemblGRCm38mm10GRCm38
MGSCv37847,556,396 - 47,621,404 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36847,969,859 - 48,034,867 (+)NCBIMGSCv36mm8
Celera849,153,706 - 49,218,586 (+)NCBICelera
Cytogenetic Map8B1.1NCBI
cM Map826.36NCBI
Acsl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81652,487,870 - 52,554,110 (-)NCBIGRCr8
mRatBN7.21645,755,246 - 45,821,541 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1645,755,254 - 45,821,541 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1651,154,126 - 51,196,774 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01654,521,461 - 54,565,831 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01649,793,500 - 49,836,154 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01648,937,456 - 49,003,898 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1648,937,456 - 49,003,246 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01648,653,023 - 48,719,250 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41649,036,892 - 49,081,416 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11649,036,966 - 49,081,491 (-)NCBI
Celera1643,758,263 - 43,802,634 (-)NCBICelera
Cytogenetic Map16q11NCBI
Acsl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540324,190,674 - 24,236,780 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540324,190,674 - 24,235,354 (+)NCBIChiLan1.0ChiLan1.0
ACSL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23182,479,288 - 182,550,746 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14182,841,132 - 182,912,587 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04176,920,811 - 176,991,495 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14189,145,403 - 189,216,458 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4189,145,403 - 189,198,646 (-)Ensemblpanpan1.1panPan2
Acsl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494333,625,129 - 33,684,355 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365544,425,495 - 4,484,887 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365544,425,518 - 4,484,853 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACSL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1545,866,857 - 45,963,729 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11545,866,858 - 45,936,327 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21552,526,606 - 52,595,992 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACSL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17130,712,633 - 130,783,360 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl7130,712,308 - 130,763,756 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037110,965,130 - 111,036,287 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Acsl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476915,503,757 - 15,584,777 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476915,503,757 - 15,584,741 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ACSL1
817 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 4 5 22 6 6 6 6 6 12 8 10 6
Low 1
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005629987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022404231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022404232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022404233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022404234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038452300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038452301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038690218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038690219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038690220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038690221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038690222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038690223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000012314   ⟹   ENSCAFP00000011415
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1645,735,703 - 45,804,970 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000064807   ⟹   ENSCAFP00000056381
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1645,735,703 - 45,804,970 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000068275   ⟹   ENSCAFP00000052202
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1645,757,314 - 45,804,970 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000070086   ⟹   ENSCAFP00000050622
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1645,735,703 - 45,804,970 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000072503   ⟹   ENSCAFP00000056847
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1645,735,703 - 45,804,970 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000089470   ⟹   ENSCAFP00000051140
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1645,757,314 - 45,804,970 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000089501   ⟹   ENSCAFP00000058593
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1645,757,314 - 45,804,970 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845041142   ⟹   ENSCAFP00845032245
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,951,663 - 48,022,186 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845041349   ⟹   ENSCAFP00845032417
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,951,663 - 48,022,186 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845041543   ⟹   ENSCAFP00845032570
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,951,663 - 48,022,186 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845041705   ⟹   ENSCAFP00845032706
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,951,663 - 48,022,186 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845041802   ⟹   ENSCAFP00845032791
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,951,691 - 48,022,196 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845041906   ⟹   ENSCAFP00845032867
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,972,358 - 48,022,190 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845042045   ⟹   ENSCAFP00845032977
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,973,685 - 48,216,959 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845042243   ⟹   ENSCAFP00845033122
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,973,685 - 48,021,747 (+)Ensembl
RefSeq Acc Id: XM_005629987   ⟹   XP_005630044
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11645,735,675 - 45,806,235 (+)NCBI
Dog10K_Boxer_Tasha1646,229,060 - 46,299,523 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022404231   ⟹   XP_022259939
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11645,758,267 - 45,806,235 (+)NCBI
Dog10K_Boxer_Tasha1646,251,107 - 46,299,523 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022404232   ⟹   XP_022259940
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11645,756,281 - 45,806,235 (+)NCBI
Dog10K_Boxer_Tasha1646,249,622 - 46,299,523 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022404234   ⟹   XP_022259942
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11645,753,157 - 45,806,235 (+)NCBI
Dog10K_Boxer_Tasha1646,246,509 - 46,299,523 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038452300   ⟹   XP_038308228
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1646,251,107 - 46,299,523 (+)NCBI
RefSeq Acc Id: XM_038452301   ⟹   XP_038308229
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1646,251,107 - 46,299,523 (+)NCBI
RefSeq Acc Id: XM_038497931   ⟹   XP_038353859
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11645,940,911 - 45,989,322 (+)NCBI
RefSeq Acc Id: XM_038497932   ⟹   XP_038353860
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11645,940,911 - 45,989,322 (+)NCBI
RefSeq Acc Id: XM_038497933   ⟹   XP_038353861
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11645,918,792 - 45,989,322 (+)NCBI
RefSeq Acc Id: XM_038497934   ⟹   XP_038353862
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11645,939,423 - 45,989,322 (+)NCBI
RefSeq Acc Id: XM_038497935   ⟹   XP_038353863
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11645,936,311 - 45,989,322 (+)NCBI
RefSeq Acc Id: XM_038497936   ⟹   XP_038353864
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11645,940,911 - 45,989,322 (+)NCBI
RefSeq Acc Id: XM_038560404   ⟹   XP_038416332
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01646,686,238 - 46,734,659 (+)NCBI
RefSeq Acc Id: XM_038560405   ⟹   XP_038416333
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01646,686,238 - 46,734,659 (+)NCBI
RefSeq Acc Id: XM_038560406   ⟹   XP_038416334
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01646,664,118 - 46,734,659 (+)NCBI
RefSeq Acc Id: XM_038560407   ⟹   XP_038416335
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01646,684,748 - 46,734,659 (+)NCBI
RefSeq Acc Id: XM_038560408   ⟹   XP_038416336
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01646,681,636 - 46,734,659 (+)NCBI
RefSeq Acc Id: XM_038560409   ⟹   XP_038416337
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01646,686,238 - 46,734,659 (+)NCBI
RefSeq Acc Id: XM_038624455   ⟹   XP_038480383
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01646,553,792 - 46,602,185 (+)NCBI
RefSeq Acc Id: XM_038624456   ⟹   XP_038480384
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01646,553,792 - 46,602,185 (+)NCBI
RefSeq Acc Id: XM_038624457   ⟹   XP_038480385
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01646,531,804 - 46,602,185 (+)NCBI
RefSeq Acc Id: XM_038624459   ⟹   XP_038480387
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01646,552,314 - 46,602,185 (+)NCBI
RefSeq Acc Id: XM_038624460   ⟹   XP_038480388
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01646,549,202 - 46,602,185 (+)NCBI
RefSeq Acc Id: XM_038624461   ⟹   XP_038480389
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01646,553,792 - 46,602,185 (+)NCBI
RefSeq Acc Id: XM_038690218   ⟹   XP_038546146
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01647,973,769 - 48,022,201 (+)NCBI
RefSeq Acc Id: XM_038690219   ⟹   XP_038546147
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01647,973,769 - 48,022,201 (+)NCBI
RefSeq Acc Id: XM_038690220   ⟹   XP_038546148
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01647,951,751 - 48,022,201 (+)NCBI
RefSeq Acc Id: XM_038690221   ⟹   XP_038546149
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01647,972,262 - 48,022,201 (+)NCBI
RefSeq Acc Id: XM_038690222   ⟹   XP_038546150
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01647,969,150 - 48,022,201 (+)NCBI
RefSeq Acc Id: XM_038690223   ⟹   XP_038546151
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01647,973,769 - 48,022,201 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005630044 (Get FASTA)   NCBI Sequence Viewer  
  XP_022259939 (Get FASTA)   NCBI Sequence Viewer  
  XP_022259940 (Get FASTA)   NCBI Sequence Viewer  
  XP_022259942 (Get FASTA)   NCBI Sequence Viewer  
  XP_038308228 (Get FASTA)   NCBI Sequence Viewer  
  XP_038308229 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353859 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353860 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353861 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353862 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353863 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353864 (Get FASTA)   NCBI Sequence Viewer  
  XP_038416332 (Get FASTA)   NCBI Sequence Viewer  
  XP_038416333 (Get FASTA)   NCBI Sequence Viewer  
  XP_038416334 (Get FASTA)   NCBI Sequence Viewer  
  XP_038416335 (Get FASTA)   NCBI Sequence Viewer  
  XP_038416336 (Get FASTA)   NCBI Sequence Viewer  
  XP_038416337 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480383 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480384 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480385 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480387 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480388 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480389 (Get FASTA)   NCBI Sequence Viewer  
  XP_038546146 (Get FASTA)   NCBI Sequence Viewer  
  XP_038546147 (Get FASTA)   NCBI Sequence Viewer  
  XP_038546148 (Get FASTA)   NCBI Sequence Viewer  
  XP_038546149 (Get FASTA)   NCBI Sequence Viewer  
  XP_038546150 (Get FASTA)   NCBI Sequence Viewer  
  XP_038546151 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000011415.5
  ENSCAFP00000050622.2
  ENSCAFP00000051140.2
  ENSCAFP00000052202.2
  ENSCAFP00000056381.1
  ENSCAFP00000056847.2
  ENSCAFP00000058593.1
  ENSCAFP00000073396.1
  ENSCAFP00030023200.1
  ENSCAFP00030023249.1
  ENSCAFP00030023281.1
  ENSCAFP00040020320.1
  ENSCAFP00040020585.1
  ENSCAFP00845032245.1
  ENSCAFP00845032417
  ENSCAFP00845032417.1
  ENSCAFP00845032570
  ENSCAFP00845032570.1
  ENSCAFP00845032706.1
  ENSCAFP00845032791.1
  ENSCAFP00845032867
  ENSCAFP00845032867.1
  ENSCAFP00845032977
  ENSCAFP00845032977.1
  ENSCAFP00845033122
  ENSCAFP00845033122.1
RefSeq Acc Id: XP_005630044   ⟸   XM_005629987
- Peptide Label: isoform X1
- UniProtKB: A0A8P0P632 (UniProtKB/TrEMBL),   A0A8C0N912 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022259942   ⟸   XM_022404234
- Peptide Label: isoform X1
- UniProtKB: A0A8P0P632 (UniProtKB/TrEMBL),   A0A8C0N912 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022259940   ⟸   XM_022404232
- Peptide Label: isoform X1
- UniProtKB: A0A8P0P632 (UniProtKB/TrEMBL),   A0A8C0N912 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022259939   ⟸   XM_022404231
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RK43 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000056381   ⟸   ENSCAFT00000064807
RefSeq Acc Id: ENSCAFP00000050622   ⟸   ENSCAFT00000070086
RefSeq Acc Id: ENSCAFP00000052202   ⟸   ENSCAFT00000068275
RefSeq Acc Id: ENSCAFP00000056847   ⟸   ENSCAFT00000072503
RefSeq Acc Id: ENSCAFP00000058593   ⟸   ENSCAFT00000089501
RefSeq Acc Id: ENSCAFP00000051140   ⟸   ENSCAFT00000089470
RefSeq Acc Id: ENSCAFP00000011415   ⟸   ENSCAFT00000012314
RefSeq Acc Id: XP_038353861   ⟸   XM_038497933
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038353863   ⟸   XM_038497935
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038353862   ⟸   XM_038497934
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038353859   ⟸   XM_038497931
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038353860   ⟸   XM_038497932
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038353864   ⟸   XM_038497936
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038480385   ⟸   XM_038624457
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038480388   ⟸   XM_038624460
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038480387   ⟸   XM_038624459
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038480383   ⟸   XM_038624455
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038480384   ⟸   XM_038624456
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038480389   ⟸   XM_038624461
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038546148   ⟸   XM_038690220
- Peptide Label: isoform X1
- UniProtKB: A0A8I3PIC2 (UniProtKB/TrEMBL),   A0A8C0N912 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038546150   ⟸   XM_038690222
- Peptide Label: isoform X1
- UniProtKB: A0A8I3PIC2 (UniProtKB/TrEMBL),   A0A8C0N912 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038546149   ⟸   XM_038690221
- Peptide Label: isoform X1
- UniProtKB: A0A8I3PIC2 (UniProtKB/TrEMBL),   A0A8C0N912 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038546146   ⟸   XM_038690218
- Peptide Label: isoform X1
- UniProtKB: A0A8I3PIC2 (UniProtKB/TrEMBL),   A0A8C0N912 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038546147   ⟸   XM_038690219
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RK43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038546151   ⟸   XM_038690223
- Peptide Label: isoform X3
- UniProtKB: A0A8I3S3P5 (UniProtKB/TrEMBL),   A0A8I3PJV9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038308228   ⟸   XM_038452300
- Peptide Label: isoform X1
- UniProtKB: A0A8P0P632 (UniProtKB/TrEMBL),   A0A8C0N912 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038308229   ⟸   XM_038452301
- Peptide Label: isoform X3
- UniProtKB: A0A8P0T8I0 (UniProtKB/TrEMBL),   A0A8C0N912 (UniProtKB/TrEMBL),   A0A8C0RK43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038416334   ⟸   XM_038560406
- Peptide Label: isoform X1
- UniProtKB: A0A8C0N912 (UniProtKB/TrEMBL),   A0A8P0P632 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038416336   ⟸   XM_038560408
- Peptide Label: isoform X1
- UniProtKB: A0A8C0N912 (UniProtKB/TrEMBL),   A0A8P0P632 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038416335   ⟸   XM_038560407
- Peptide Label: isoform X1
- UniProtKB: A0A8C0N912 (UniProtKB/TrEMBL),   A0A8P0P632 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038416332   ⟸   XM_038560404
- Peptide Label: isoform X1
- UniProtKB: A0A8C0N912 (UniProtKB/TrEMBL),   A0A8P0P632 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038416333   ⟸   XM_038560405
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RK43 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038416337   ⟸   XM_038560409
- Peptide Label: isoform X3
- UniProtKB: A0A8C0N912 (UniProtKB/TrEMBL),   A0A8C0RK43 (UniProtKB/TrEMBL),   A0A8P0T8I0 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845032570   ⟸   ENSCAFT00845041543
RefSeq Acc Id: ENSCAFP00845032417   ⟸   ENSCAFT00845041349
RefSeq Acc Id: ENSCAFP00845033122   ⟸   ENSCAFT00845042243
RefSeq Acc Id: ENSCAFP00845032867   ⟸   ENSCAFT00845041906
RefSeq Acc Id: ENSCAFP00845032245   ⟸   ENSCAFT00845041142
RefSeq Acc Id: ENSCAFP00845032791   ⟸   ENSCAFT00845041802
RefSeq Acc Id: ENSCAFP00845032706   ⟸   ENSCAFT00845041705
RefSeq Acc Id: ENSCAFP00845032977   ⟸   ENSCAFT00845042045
Promoters
RGD ID:13686135
Promoter ID:EPDNEW_C4203
Type:single initiation site
Name:ACSL1_1
Description:acyl-CoA synthetase long chain family member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11645,735,771 - 45,735,831EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000007662 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030014317 UniProtKB/TrEMBL
  ENSCAFG00040012485 UniProtKB/TrEMBL
  ENSCAFG00845023265 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000012314.5 UniProtKB/TrEMBL
  ENSCAFT00000064807.2 UniProtKB/TrEMBL
  ENSCAFT00000068275.2 UniProtKB/TrEMBL
  ENSCAFT00000070086.2 UniProtKB/TrEMBL
  ENSCAFT00000072503.2 UniProtKB/TrEMBL
  ENSCAFT00000089470.2 UniProtKB/TrEMBL
  ENSCAFT00000089501.2 UniProtKB/TrEMBL
  ENSCAFT00000105108.1 UniProtKB/TrEMBL
  ENSCAFT00030026578.1 UniProtKB/TrEMBL
  ENSCAFT00030026633.1 UniProtKB/TrEMBL
  ENSCAFT00030026673.1 UniProtKB/TrEMBL
  ENSCAFT00040023420.1 UniProtKB/TrEMBL
  ENSCAFT00040023705.1 UniProtKB/TrEMBL
  ENSCAFT00845041142.1 UniProtKB/TrEMBL
  ENSCAFT00845041349 ENTREZGENE
  ENSCAFT00845041349.1 UniProtKB/TrEMBL
  ENSCAFT00845041543 ENTREZGENE
  ENSCAFT00845041543.1 UniProtKB/TrEMBL
  ENSCAFT00845041705.1 UniProtKB/TrEMBL
  ENSCAFT00845041802.1 UniProtKB/TrEMBL
  ENSCAFT00845041906 ENTREZGENE
  ENSCAFT00845041906.1 UniProtKB/TrEMBL
  ENSCAFT00845042045 ENTREZGENE
  ENSCAFT00845042045.1 UniProtKB/TrEMBL
  ENSCAFT00845042243 ENTREZGENE
  ENSCAFT00845042243.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.12780 UniProtKB/TrEMBL
InterPro AMP-binding_CS UniProtKB/TrEMBL
  AMP-dep_Synth/Lig UniProtKB/TrEMBL
  ANL_N_sf UniProtKB/TrEMBL
  LC-FACS_euk UniProtKB/TrEMBL
KEGG Report cfa:475631 UniProtKB/TrEMBL
NCBI Gene ACSL1 ENTREZGENE
PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE UniProtKB/TrEMBL
  LONG-CHAIN-FATTY-ACID--COA LIGASE 1 UniProtKB/TrEMBL
Pfam AMP-binding UniProtKB/TrEMBL
PROSITE AMP_BINDING UniProtKB/TrEMBL
Superfamily-SCOP Acetyl-CoA synthetase-like UniProtKB/TrEMBL
UniProt A0A8C0N912 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0NGM0_CANLF UniProtKB/TrEMBL
  A0A8C0RK43 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SGN3_CANLF UniProtKB/TrEMBL
  A0A8C0SHD0_CANLF UniProtKB/TrEMBL
  A0A8I3PFJ0_CANLF UniProtKB/TrEMBL
  A0A8I3PFX3_CANLF UniProtKB/TrEMBL
  A0A8I3PHY8_CANLF UniProtKB/TrEMBL
  A0A8I3PIC2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PJV9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PNZ9_CANLF UniProtKB/TrEMBL
  A0A8I3PP81_CANLF UniProtKB/TrEMBL
  A0A8I3S3P5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0P1Y2_CANLF UniProtKB/TrEMBL
  A0A8P0P632 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0T3T4_CANLF UniProtKB/TrEMBL
  A0A8P0T8I0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0TSE5_CANLF UniProtKB/TrEMBL
UniProt Secondary A0A8P0P0F4 UniProtKB/TrEMBL
  A0A8P0SCY4 UniProtKB/TrEMBL
  A0A8P0TAL7 UniProtKB/TrEMBL
VGNC ID VGNC:37532 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-06-20 ACSL1  acyl-CoA synthetase long chain family member 1    acyl-CoA synthetase long-chain family member 1  Symbol and/or name change 5135510 APPROVED