KCNT2 (potassium sodium-activated channel subfamily T member 2) - Rat Genome Database

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Gene: KCNT2 (potassium sodium-activated channel subfamily T member 2) Canis lupus familiaris
Analyze
Symbol: KCNT2
Name: potassium sodium-activated channel subfamily T member 2
RGD ID: 12083408
Description: ENCODES a protein that exhibits chloride-activated potassium channel activity (ortholog); INVOLVED IN potassium ion export across plasma membrane (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH Congenital Hyperinsulinism (ortholog); developmental and epileptic encephalopathy 57 (ortholog); epilepsy (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: potassium channel subfamily T member 2; potassium channel, subfamily T, member 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1383,006,639 - 3,382,234 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl383,006,140 - 3,380,218 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha383,097,770 - 3,473,355 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0383,003,542 - 3,376,325 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl383,003,375 - 3,377,999 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1382,999,648 - 3,374,824 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0383,391,702 - 3,766,835 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0383,591,639 - 3,964,394 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
KCNT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1383,006,639 - 3,382,234 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl383,006,140 - 3,380,218 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha383,097,770 - 3,473,355 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0383,003,542 - 3,376,325 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl383,003,375 - 3,377,999 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1382,999,648 - 3,374,824 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0383,391,702 - 3,766,835 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0383,591,639 - 3,964,394 (+)NCBIUU_Cfam_GSD_1.0
KCNT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381196,225,779 - 196,608,440 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1196,225,779 - 196,609,225 (-)EnsemblGRCh38hg38GRCh38
GRCh371196,194,909 - 196,577,570 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361194,461,536 - 194,844,122 (-)NCBINCBI36Build 36hg18NCBI36
Celera1169,303,964 - 169,686,483 (-)NCBICelera
Cytogenetic Map1q31.3NCBI
HuRef1167,436,578 - 167,819,452 (-)NCBIHuRef
CHM1_11197,616,644 - 197,999,107 (-)NCBICHM1_1
T2T-CHM13v2.01195,571,842 - 195,954,779 (-)NCBIT2T-CHM13v2.0
Kcnt2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391140,173,373 - 140,541,783 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1140,173,896 - 140,539,805 (+)EnsemblGRCm39 Ensembl
GRCm381140,245,657 - 140,614,045 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1140,246,158 - 140,612,067 (+)EnsemblGRCm38mm10GRCm38
MGSCv371142,142,834 - 142,506,838 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361142,062,668 - 142,426,672 (+)NCBIMGSCv36mm8
Celera1142,875,113 - 143,237,483 (+)NCBICelera
Cytogenetic Map1FNCBI
cM Map161.62NCBI
Kcnt2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81354,214,831 - 54,609,889 (+)NCBIGRCr8
mRatBN7.21351,664,129 - 52,059,209 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1351,664,686 - 52,056,987 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1354,250,284 - 54,650,283 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01355,538,210 - 55,938,219 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01352,807,916 - 53,208,525 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01357,130,855 - 57,520,263 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1357,131,395 - 57,521,836 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01362,143,990 - 62,534,723 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41353,407,504 - 53,803,012 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11353,421,583 - 53,817,092 (+)NCBI
Celera1351,920,143 - 52,310,493 (+)NCBICelera
Cytogenetic Map13q21NCBI
Kcnt2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540633,076,426 - 33,441,793 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540633,080,570 - 33,441,342 (-)NCBIChiLan1.0ChiLan1.0
KCNT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2153,195,409 - 53,586,328 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1152,800,951 - 53,192,049 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01171,722,130 - 172,112,927 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11176,001,997 - 176,391,180 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1176,003,920 - 176,390,592 (-)Ensemblpanpan1.1panPan2
Kcnt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934477,990,611 - 78,357,811 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366383,789,701 - 4,051,971 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366383,789,339 - 4,154,356 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCNT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.21023,896,301 - 24,106,816 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KCNT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12532,790,439 - 33,193,936 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2532,922,277 - 33,192,820 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605533,705,790 - 34,115,831 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kcnt2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247983,578,706 - 3,867,854 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247983,579,528 - 3,868,717 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in KCNT2
3841 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 1 1 1
Low 4 20 5 2 5 6 12 8 9 6
Below cutoff 1 5 1 4 6 1

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_038448368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038448369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038448370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038448372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038448373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038448374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038448375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038464088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038464089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038464090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038464091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038464092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038464093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038586089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038586090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038586091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038586092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038586093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038586094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038586095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038650492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038650493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038650494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038650495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038650496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038650497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038650498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_844191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000048673   ⟹   ENSCAFP00000040183
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl383,006,140 - 3,380,218 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000066467   ⟹   ENSCAFP00000064017
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl383,006,140 - 3,380,218 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000087422   ⟹   ENSCAFP00000049295
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl383,006,140 - 3,380,218 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845052566   ⟹   ENSCAFP00845041251
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl383,003,375 - 3,377,999 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845052631   ⟹   ENSCAFP00845041305
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl383,003,375 - 3,377,999 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845052720   ⟹   ENSCAFP00845041383
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl383,003,375 - 3,377,999 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845052782   ⟹   ENSCAFP00845041439
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl383,003,375 - 3,377,999 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845052794   ⟹   ENSCAFP00845041447
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl383,003,375 - 3,377,999 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845052827   ⟹   ENSCAFP00845041472
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl383,143,823 - 3,377,999 (+)Ensembl
RefSeq Acc Id: XM_038448368   ⟹   XP_038304296
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0383,003,542 - 3,376,325 (+)NCBI
RefSeq Acc Id: XM_038448369   ⟹   XP_038304297
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0383,003,542 - 3,376,325 (+)NCBI
RefSeq Acc Id: XM_038448370   ⟹   XP_038304298
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0383,003,542 - 3,376,325 (+)NCBI
RefSeq Acc Id: XM_038448372   ⟹   XP_038304300
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0383,003,542 - 3,376,325 (+)NCBI
RefSeq Acc Id: XM_038448373   ⟹   XP_038304301
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0383,003,542 - 3,376,325 (+)NCBI
RefSeq Acc Id: XM_038448374   ⟹   XP_038304302
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0383,003,542 - 3,376,325 (+)NCBI
RefSeq Acc Id: XM_038448375   ⟹   XP_038304303
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0383,003,542 - 3,376,325 (+)NCBI
RefSeq Acc Id: XM_038464088   ⟹   XP_038320016
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha383,097,770 - 3,473,355 (+)NCBI
RefSeq Acc Id: XM_038464089   ⟹   XP_038320017
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha383,097,770 - 3,473,355 (+)NCBI
RefSeq Acc Id: XM_038464090   ⟹   XP_038320018
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha383,097,770 - 3,473,355 (+)NCBI
RefSeq Acc Id: XM_038464091   ⟹   XP_038320019
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha383,097,770 - 3,473,355 (+)NCBI
RefSeq Acc Id: XM_038464092   ⟹   XP_038320020
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha383,097,770 - 3,473,355 (+)NCBI
RefSeq Acc Id: XM_038464093   ⟹   XP_038320021
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha383,097,770 - 3,473,355 (+)NCBI
RefSeq Acc Id: XM_038522284   ⟹   XP_038378212
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1382,999,648 - 3,374,824 (+)NCBI
RefSeq Acc Id: XM_038522286   ⟹   XP_038378214
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1382,999,648 - 3,374,824 (+)NCBI
RefSeq Acc Id: XM_038522287   ⟹   XP_038378215
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1382,999,648 - 3,374,824 (+)NCBI
RefSeq Acc Id: XM_038522288   ⟹   XP_038378216
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1382,999,648 - 3,374,824 (+)NCBI
RefSeq Acc Id: XM_038522289   ⟹   XP_038378217
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1382,999,648 - 3,374,824 (+)NCBI
RefSeq Acc Id: XM_038522290   ⟹   XP_038378218
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1382,999,648 - 3,374,824 (+)NCBI
RefSeq Acc Id: XM_038522291   ⟹   XP_038378219
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1382,999,648 - 3,374,824 (+)NCBI
RefSeq Acc Id: XM_038586089   ⟹   XP_038442017
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0383,591,639 - 3,964,394 (+)NCBI
RefSeq Acc Id: XM_038586090   ⟹   XP_038442018
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0383,591,639 - 3,964,394 (+)NCBI
RefSeq Acc Id: XM_038586091   ⟹   XP_038442019
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0383,591,639 - 3,964,394 (+)NCBI
RefSeq Acc Id: XM_038586092   ⟹   XP_038442020
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0383,591,639 - 3,964,394 (+)NCBI
RefSeq Acc Id: XM_038586093   ⟹   XP_038442021
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0383,591,639 - 3,964,394 (+)NCBI
RefSeq Acc Id: XM_038586094   ⟹   XP_038442022
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0383,591,639 - 3,964,394 (+)NCBI
RefSeq Acc Id: XM_038586095   ⟹   XP_038442023
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0383,591,639 - 3,964,394 (+)NCBI
RefSeq Acc Id: XM_038650492   ⟹   XP_038506420
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0383,391,702 - 3,766,835 (+)NCBI
RefSeq Acc Id: XM_038650493   ⟹   XP_038506421
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0383,391,702 - 3,766,835 (+)NCBI
RefSeq Acc Id: XM_038650494   ⟹   XP_038506422
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0383,391,702 - 3,766,835 (+)NCBI
RefSeq Acc Id: XM_038650495   ⟹   XP_038506423
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0383,391,702 - 3,766,835 (+)NCBI
RefSeq Acc Id: XM_038650496   ⟹   XP_038506424
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0383,391,702 - 3,766,835 (+)NCBI
RefSeq Acc Id: XM_038650497   ⟹   XP_038506425
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0383,391,702 - 3,766,835 (+)NCBI
RefSeq Acc Id: XM_038650498   ⟹   XP_038506426
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0383,391,702 - 3,766,835 (+)NCBI
RefSeq Acc Id: XM_844191   ⟹   XP_849284
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1383,006,639 - 3,382,234 (+)NCBI
Dog10K_Boxer_Tasha383,097,770 - 3,473,355 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_038304296 (Get FASTA)   NCBI Sequence Viewer  
  XP_038304297 (Get FASTA)   NCBI Sequence Viewer  
  XP_038304298 (Get FASTA)   NCBI Sequence Viewer  
  XP_038304300 (Get FASTA)   NCBI Sequence Viewer  
  XP_038304301 (Get FASTA)   NCBI Sequence Viewer  
  XP_038304302 (Get FASTA)   NCBI Sequence Viewer  
  XP_038304303 (Get FASTA)   NCBI Sequence Viewer  
  XP_038320016 (Get FASTA)   NCBI Sequence Viewer  
  XP_038320017 (Get FASTA)   NCBI Sequence Viewer  
  XP_038320018 (Get FASTA)   NCBI Sequence Viewer  
  XP_038320019 (Get FASTA)   NCBI Sequence Viewer  
  XP_038320020 (Get FASTA)   NCBI Sequence Viewer  
  XP_038320021 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378212 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378214 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378215 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378216 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378217 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378218 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378219 (Get FASTA)   NCBI Sequence Viewer  
  XP_038442017 (Get FASTA)   NCBI Sequence Viewer  
  XP_038442018 (Get FASTA)   NCBI Sequence Viewer  
  XP_038442019 (Get FASTA)   NCBI Sequence Viewer  
  XP_038442020 (Get FASTA)   NCBI Sequence Viewer  
  XP_038442021 (Get FASTA)   NCBI Sequence Viewer  
  XP_038442022 (Get FASTA)   NCBI Sequence Viewer  
  XP_038442023 (Get FASTA)   NCBI Sequence Viewer  
  XP_038506420 (Get FASTA)   NCBI Sequence Viewer  
  XP_038506421 (Get FASTA)   NCBI Sequence Viewer  
  XP_038506422 (Get FASTA)   NCBI Sequence Viewer  
  XP_038506423 (Get FASTA)   NCBI Sequence Viewer  
  XP_038506424 (Get FASTA)   NCBI Sequence Viewer  
  XP_038506425 (Get FASTA)   NCBI Sequence Viewer  
  XP_038506426 (Get FASTA)   NCBI Sequence Viewer  
  XP_849284 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000040183.3
  ENSCAFP00000049295.2
  ENSCAFP00000064017.2
  ENSCAFP00000069536.1
  ENSCAFP00000069990.1
  ENSCAFP00000075253.1
  ENSCAFP00030039495.1
  ENSCAFP00030039515.1
  ENSCAFP00030039538.1
  ENSCAFP00030039567.1
  ENSCAFP00040015964.1
  ENSCAFP00040016008.1
  ENSCAFP00040016185.1
  ENSCAFP00040016417.1
  ENSCAFP00040016465.1
  ENSCAFP00040016536.1
  ENSCAFP00845041251
  ENSCAFP00845041251.1
  ENSCAFP00845041305
  ENSCAFP00845041305.1
  ENSCAFP00845041383
  ENSCAFP00845041383.1
  ENSCAFP00845041439
  ENSCAFP00845041439.1
  ENSCAFP00845041447
  ENSCAFP00845041447.1
  ENSCAFP00845041472.1
Reference Protein Sequences
RefSeq Acc Id: XP_849284   ⟸   XM_844191
- Peptide Label: isoform X4
- UniProtKB: A0A8C0S542 (UniProtKB/TrEMBL),   A0A8P0PCU4 (UniProtKB/TrEMBL),   A0A8C0S5M1 (UniProtKB/TrEMBL),   A0A8P0TMS5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000049295   ⟸   ENSCAFT00000087422
RefSeq Acc Id: ENSCAFP00000040183   ⟸   ENSCAFT00000048673
RefSeq Acc Id: ENSCAFP00000064017   ⟸   ENSCAFT00000066467
RefSeq Acc Id: XP_038378212   ⟸   XM_038522284
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038378215   ⟸   XM_038522287
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038378214   ⟸   XM_038522286
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038378216   ⟸   XM_038522288
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038378217   ⟸   XM_038522289
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038378218   ⟸   XM_038522290
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038378219   ⟸   XM_038522291
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038506420   ⟸   XM_038650492
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038506422   ⟸   XM_038650494
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038506421   ⟸   XM_038650493
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038506423   ⟸   XM_038650495
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038506424   ⟸   XM_038650496
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038506425   ⟸   XM_038650497
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038506426   ⟸   XM_038650498
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038304296   ⟸   XM_038448368
- Peptide Label: isoform X1
- UniProtKB: A0A8C0YTR1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038304298   ⟸   XM_038448370
- Peptide Label: isoform X3
- UniProtKB: A0A8I3QW23 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038304297   ⟸   XM_038448369
- Peptide Label: isoform X2
- UniProtKB: A0A8I3SCE8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038304300   ⟸   XM_038448372
- Peptide Label: isoform X4
- UniProtKB: A0A8I3Q1K7 (UniProtKB/TrEMBL),   A0A8I3QW23 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038304301   ⟸   XM_038448373
- Peptide Label: isoform X5
- UniProtKB: A0A8C0YTR1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038304302   ⟸   XM_038448374
- Peptide Label: isoform X6
- UniProtKB: A0A8I3QW23 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038304303   ⟸   XM_038448375
- Peptide Label: isoform X7
- UniProtKB: A0A8I3S7B4 (UniProtKB/TrEMBL),   A0A8I3QW23 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038320016   ⟸   XM_038464088
- Peptide Label: isoform X1
- UniProtKB: A0A8C0YTR1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038320018   ⟸   XM_038464090
- Peptide Label: isoform X3
- UniProtKB: A0A8C0S5M1 (UniProtKB/TrEMBL),   A0A8P0TMS5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038320017   ⟸   XM_038464089
- Peptide Label: isoform X2
- UniProtKB: A0A8P0PIV1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038320019   ⟸   XM_038464091
- Peptide Label: isoform X5
- UniProtKB: A0A8C0YTR1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038320020   ⟸   XM_038464092
- Peptide Label: isoform X6
- UniProtKB: A0A8C0S5M1 (UniProtKB/TrEMBL),   A0A8P0TMS5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038320021   ⟸   XM_038464093
- Peptide Label: isoform X7
- UniProtKB: A0A8C0S6A1 (UniProtKB/TrEMBL),   A0A8P0T214 (UniProtKB/TrEMBL),   A0A8C0S5M1 (UniProtKB/TrEMBL),   A0A8P0TMS5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038442017   ⟸   XM_038586089
- Peptide Label: isoform X1
- UniProtKB: A0A8C0YTR1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038442019   ⟸   XM_038586091
- Peptide Label: isoform X3
- UniProtKB: A0A8C0S5M1 (UniProtKB/TrEMBL),   A0A8P0TMS5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038442018   ⟸   XM_038586090
- Peptide Label: isoform X2
- UniProtKB: A0A8P0PIV1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038442020   ⟸   XM_038586092
- Peptide Label: isoform X4
- UniProtKB: A0A8C0S542 (UniProtKB/TrEMBL),   A0A8C0S5M1 (UniProtKB/TrEMBL),   A0A8P0PCU4 (UniProtKB/TrEMBL),   A0A8P0TMS5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038442021   ⟸   XM_038586093
- Peptide Label: isoform X5
- UniProtKB: A0A8C0YTR1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038442022   ⟸   XM_038586094
- Peptide Label: isoform X6
- UniProtKB: A0A8C0S5M1 (UniProtKB/TrEMBL),   A0A8P0TMS5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038442023   ⟸   XM_038586095
- Peptide Label: isoform X7
- UniProtKB: A0A8C0S5M1 (UniProtKB/TrEMBL),   A0A8C0S6A1 (UniProtKB/TrEMBL),   A0A8P0T214 (UniProtKB/TrEMBL),   A0A8P0TMS5 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845041383   ⟸   ENSCAFT00845052720
RefSeq Acc Id: ENSCAFP00845041447   ⟸   ENSCAFT00845052794
RefSeq Acc Id: ENSCAFP00845041251   ⟸   ENSCAFT00845052566
RefSeq Acc Id: ENSCAFP00845041472   ⟸   ENSCAFT00845052827
RefSeq Acc Id: ENSCAFP00845041305   ⟸   ENSCAFT00845052631
RefSeq Acc Id: ENSCAFP00845041439   ⟸   ENSCAFT00845052782
Protein Domains
Calcium-activated potassium channel BK alpha   Potassium channel


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000031664 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030024559 UniProtKB/TrEMBL
  ENSCAFG00040009681 UniProtKB/TrEMBL
  ENSCAFG00845029633 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000048673.3 UniProtKB/TrEMBL
  ENSCAFT00000066467.2 UniProtKB/TrEMBL
  ENSCAFT00000087422.2 UniProtKB/TrEMBL
  ENSCAFT00000094864.1 UniProtKB/TrEMBL
  ENSCAFT00000095791.1 UniProtKB/TrEMBL
  ENSCAFT00000096699.1 UniProtKB/TrEMBL
  ENSCAFT00030045237.1 UniProtKB/TrEMBL
  ENSCAFT00030045258.1 UniProtKB/TrEMBL
  ENSCAFT00030045283.1 UniProtKB/TrEMBL
  ENSCAFT00030045317.1 UniProtKB/TrEMBL
  ENSCAFT00040018384.1 UniProtKB/TrEMBL
  ENSCAFT00040018436.1 UniProtKB/TrEMBL
  ENSCAFT00040018649.1 UniProtKB/TrEMBL
  ENSCAFT00040018923.1 UniProtKB/TrEMBL
  ENSCAFT00040018980.1 UniProtKB/TrEMBL
  ENSCAFT00040019057.1 UniProtKB/TrEMBL
  ENSCAFT00845052566 ENTREZGENE
  ENSCAFT00845052566.1 UniProtKB/TrEMBL
  ENSCAFT00845052631 ENTREZGENE
  ENSCAFT00845052631.1 UniProtKB/TrEMBL
  ENSCAFT00845052720 ENTREZGENE
  ENSCAFT00845052720.1 UniProtKB/TrEMBL
  ENSCAFT00845052782 ENTREZGENE
  ENSCAFT00845052782.1 UniProtKB/TrEMBL
  ENSCAFT00845052794 ENTREZGENE
  ENSCAFT00845052794.1 UniProtKB/TrEMBL
  ENSCAFT00845052827.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.70 UniProtKB/TrEMBL
  NAD(P)-binding Rossmann-like Domain UniProtKB/TrEMBL
InterPro K_chnl_BK_asu UniProtKB/TrEMBL
  K_chnl_dom UniProtKB/TrEMBL
  K_chnl_Slo-like UniProtKB/TrEMBL
  NAD(P)-bd_dom_sf UniProtKB/TrEMBL
NCBI Gene KCNT2 ENTREZGENE
PANTHER CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN UniProtKB/TrEMBL
  POTASSIUM CHANNEL SUBFAMILY T MEMBER 2 UniProtKB/TrEMBL
Pfam BK_channel_a UniProtKB/TrEMBL
  Ion_trans_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF51735 UniProtKB/TrEMBL
  Voltage-gated potassium channels UniProtKB/TrEMBL
UniProt A0A8C0PDQ2_CANLF UniProtKB/TrEMBL
  A0A8C0S542 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0S5M1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0S698_CANLF UniProtKB/TrEMBL
  A0A8C0S6A1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0YTR1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3Q1K7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3Q7I1_CANLF UniProtKB/TrEMBL
  A0A8I3QKY2_CANLF UniProtKB/TrEMBL
  A0A8I3QW23 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3S7B4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3SCE8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PCU4 ENTREZGENE
  A0A8P0PIV1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0T214 ENTREZGENE
  A0A8P0TMS5 ENTREZGENE
UniProt Secondary A0A8P0PCU4 UniProtKB/TrEMBL
  A0A8P0SUD9 UniProtKB/TrEMBL
  A0A8P0T214 UniProtKB/TrEMBL
  A0A8P0TMS5 UniProtKB/TrEMBL
VGNC ID VGNC:110516 ENTREZGENE