SLC2A1 (solute carrier family 2 member 1)

Gene: SLC2A1 (solute carrier family 2 member 1) Canis lupus familiaris

Analyze

Symbol:

SLC2A1

Name:

solute carrier family 2 member 1

RGD ID:

12081631

Description:

ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); glucose transmembrane transporter activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular hyperosmotic response (ortholog); cellular response to glucose starvation (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN facilitative sugar transporter mediated glucose transport pathway; Glut1 deficiency syndrome pathway; hypoxia inducible factor pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Ataxia (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN caveola (ortholog); cell-cell junction (ortholog); cortical actin cytoskeleton (ortholog)

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

solute carrier family 2, facilitated glucose transporter member 1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	463,307 - 493,145 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	463,237 - 493,140 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	719,928 - 748,675 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	546,520 - 575,271 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	546,386 - 575,265 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	456,107 - 484,827 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	515,411 - 544,075 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	532,601 - 561,334 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Alzheimer's disease (ISO)

Ataxia (ISO)

benign epilepsy with centrotemporal spikes (ISO)

Breast Neoplasms (ISO)

cataract (ISO)

cerebellar ataxia (ISO)

Charcot-Marie-Tooth disease dominant intermediate C (ISO)

childhood absence epilepsy (ISO)

childhood onset GLUT1 deficiency syndrome 2 (ISO)

Colonic Neoplasms (ISO)

Developmental Disabilities (ISO)

Developmental Disease (ISO)

diabetes mellitus (ISO)

Diabetic Nephropathies (ISO)

Ductal Carcinoma (ISO)

ductal carcinoma in situ (ISO)

dystonia (ISO)

dystonia 9 (ISO)

epilepsy (ISO)

Experimental Diabetes Mellitus (ISO)

Fetal Growth Retardation (ISO)

genetic disease (ISO)

glomerulosclerosis (ISO)

GLUT1 Deficiency Syndrome (ISO)

hemangioma (ISO)

hepatocellular carcinoma (ISO)

Hirschsprung's disease (ISO)

hypertension (ISO)

hypothyroidism (ISO)

idiopathic generalized epilepsy 12 (ISO)

Infantile Capillary Hemangioma (ISO)

inherited metabolic disorder (ISO)

intellectual disability (ISO)

Liver Neoplasms (ISO)

malignant mesothelioma (ISO)

Metabolic Syndrome (ISO)

microcephaly (ISO)

middle cerebral artery infarction (ISO)

migraine (ISO)

Muscle Weakness (ISO)

muscular disease (ISO)

Myalgia (ISO)

myelomeningocele (ISO)

Myocardial Reperfusion Injury (ISO)

Myoclonic Epilepsies (ISO)

myopathy (ISO)

Neoplastic Cell Transformation (ISO)

nephroblastoma (ISO)

nervous system disease (ISO)

obesity (ISO)

osteoarthritis (ISO)

Ovarian Neoplasms (ISO)

Peritoneal Neoplasms (ISO)

pre-eclampsia (ISO)

renal cell carcinoma (ISO)

Reperfusion Injury (ISO)

Stomatin-Deficient Cryohydrocytosis with Mental Retardation, Seizures, Cataracts, and Massive Hepatosplenomegaly (ISO)

type 2 diabetes mellitus (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular hyperosmotic response (ISO)

cellular response to glucose starvation (IEA,ISO)

cellular response to mechanical stimulus (ISO)

central nervous system development (ISO)

cerebral cortex development (ISO)

dehydroascorbic acid transport (IEA,ISO)

female pregnancy (ISO)

glucose import (IEA,ISO)

glucose import across plasma membrane (ISO)

glucose transmembrane transport (IEA,ISO)

hexose transmembrane transport (IEA)

long-chain fatty acid import across plasma membrane (ISO)

organic substance transport (IEA)

protein-containing complex assembly (ISO)

response to hypoxia (ISO)

response to insulin (IEA,ISO)

response to Thyroglobulin triiodothyronine (ISO)

transmembrane transport (IEA)

transport across blood-brain barrier (ISO)

xenobiotic transport (ISO)

Cellular Component

apical plasma membrane (IEA)

basolateral plasma membrane (IEA)

caveola (ISO)

cell-cell junction (ISO)

cortical actin cytoskeleton (ISO)

cytoplasm (IEA)

cytosol (IEA)

female germ cell nucleus (IEA)

female pronucleus (IEA)

glucose transporter complex (ISO)

Golgi membrane (IEA,ISO)

intercalated disc (ISO)

membrane (IEA)

membrane raft (IEA)

midbody (ISO)

photoreceptor inner segment (IEA)

plasma membrane (IEA,ISO)

presynapse (IEA)

sarcolemma (ISO)

synapse (IEA)

vesicle (IEA)

Z disc (ISO)

Molecular Function

D-glucose transmembrane transporter activity (IEA,ISO)

dehydroascorbic acid transmembrane transporter activity (IEA)

glucose transmembrane transporter activity (IEA,ISO)

hexose transmembrane transporter activity (IEA)

identical protein binding (ISO)

kinase binding (ISO)

long-chain fatty acid transmembrane transporter activity (ISO)

obsolete protein self-association (ISO)

protein binding (ISO)

transmembrane transporter activity (IEA)

xenobiotic transmembrane transporter activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

facilitative sugar transporter mediated glucose transport pathway (ISO)

Glut1 deficiency syndrome pathway (ISO)

hypoxia inducible factor pathway (ISO)

lactose biosynthetic pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:24140705	PMID:26726103	PMID:26906567	PMID:27320814	PMID:30032202	PMID:37756605

Genomics

Comparative Map Data

SLC2A1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	463,307 - 493,145 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	463,237 - 493,140 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	719,928 - 748,675 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	546,520 - 575,271 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	546,386 - 575,265 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	456,107 - 484,827 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	515,411 - 544,075 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	532,601 - 561,334 (+)	NCBI		UU_Cfam_GSD_1.0

SLC2A1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	42,925,353 - 42,958,868 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	42,925,353 - 42,958,893 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	43,391,024 - 43,424,539 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	43,164,102 - 43,197,088 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	43,060,611 - 43,093,594	NCBI
Celera	1	41,673,133 - 41,706,939 (-)	NCBI		Celera
Cytogenetic Map	1	p34.2	NCBI
HuRef	1	41,511,000 - 41,544,561 (-)	NCBI		HuRef
CHM1_1	1	43,507,796 - 43,541,586 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	42,795,821 - 42,829,338 (-)	NCBI		T2T-CHM13v2.0

Slc2a1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	118,966,001 - 118,994,527 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	118,965,908 - 118,995,180 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	119,108,745 - 119,137,330 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	119,108,711 - 119,137,983 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	118,781,350 - 118,809,935 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	118,606,700 - 118,635,259 (+)	NCBI		MGSCv36	mm8
Celera	4	117,836,249 - 117,864,839 (+)	NCBI		Celera
Cytogenetic Map	4	D2.1	NCBI
cM Map	4	55.34	NCBI

Slc2a1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	138,002,522 - 138,030,742 (+)	NCBI		GRCr8
mRatBN7.2	5	132,717,196 - 132,745,416 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	132,717,196 - 132,745,416 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	135,447,151 - 135,475,394 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	137,203,611 - 137,231,856 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	137,224,210 - 137,252,451 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	138,154,677 - 138,182,897 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	138,154,673 - 138,182,897 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	141,964,114 - 141,992,634 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	139,690,801 - 139,719,021 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	139,696,029 - 139,724,247 (+)	NCBI
Celera	5	131,243,786 - 131,272,021 (+)	NCBI		Celera
RH 3.4 Map	5	865.0	RGD
Cytogenetic Map	5	q36	NCBI

Slc2a1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955537	2,408,042 - 2,439,511 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955537	2,408,042 - 2,438,788 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC2A1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	183,853,979 - 183,886,954 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	182,995,645 - 183,028,526 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	42,224,273 - 42,257,184 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	43,600,733 - 43,634,143 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	43,600,733 - 43,634,143 (-)	Ensembl	panpan1.1		panPan2

Slc2a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	58,381,102 - 58,411,854 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	24,206,644 - 24,236,713 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	24,205,878 - 24,236,611 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC2A1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	89,974,567 - 90,007,977 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	90,002,030 - 90,008,033 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	26,904,125 - 26,937,791 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc2a1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624892	2,117,561 - 2,148,037 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624892	2,110,310 - 2,148,023 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SLC2A1
218 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	4	5	16		1		6	1	12		10
Low	1		6	6	5	6		5		8		6
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001159326	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022427664	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038687191	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CK999372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DN441179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DN866763	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DN880859	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DN905203	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FJ797638	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000160	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000003950 ⟹ ENSCAFP00000003651

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	15	463,237 - 493,140 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845027263 ⟹ ENSCAFP00845021451

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	15	546,386 - 575,265 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845027278 ⟹ ENSCAFP00845021465

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	15	546,386 - 574,616 (+)	Ensembl

RefSeq Acc Id:

NM_001159326 ⟹ NP_001152798

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	464,182 - 493,145 (+)	NCBI
Dog10K_Boxer_Tasha	15	719,928 - 748,675 (+)	NCBI
ROS_Cfam_1.0	15	546,520 - 575,271 (+)	NCBI
UMICH_Zoey_3.1	15	456,107 - 484,827 (+)	NCBI
UNSW_CanFamBas_1.0	15	515,411 - 544,075 (+)	NCBI
UU_Cfam_GSD_1.0	15	532,601 - 561,334 (+)	NCBI

Sequence:

show sequence

ATGGAGCCCGGCAGCAAGAAGCTGACAGGCCGCCTCATGCTGGCTGTGGGAGGGGCAGTACTCG
GCTCCCTGCAGTTTGGCTACAACACTGGAGTCATCAATGCCCCCCAGAAGGTGATTGAGGAGTT
CTACAACCAGACATGGATCCACCGCTATCAGGAGAGCATCTCCCCCACCACGCTCACCACGCTG
TGGTCCCTCTCTGTAGCCATCTTCTCTGTAGGAGGCATGATCGGCTCCTTCTCTGTGGGCCTTT
TTGTGAACCGCTTTGGCCGGCGGAACTCCATGCTGATGATGAACCTGCTGGCCTTCGTGTCCTC
TGTGCTCATGGGCTTCTCGAAACTGGCCAAGTCCTTTGAGATGCTGATCCTGGGCCGCTTCATC
ATTGGTGTGTACTGTGGCTTGACCACAGGCTTCGTGCCCATGTACGTGGGGGAGGTGTCCCCTA
CGGCCCTTCGCGGGGCCCTGGGCACCCTGCACCAGCTGGGCATCGTTGTTGGCATCCTCATTGC
CCAGGTGTTCGGCCTGGACTCCATCATGGGCAACGAGGACCTGTGGCCCTTGCTGCTGAGCGTC
ATCTTCATCCCAGCCCTGCTGCAGTGCGTCCTGCTGCCCTTGTGCCCCGAGAGCCCCCGCTTCC
TGCTCATCAACCGCAATGAGGAGAACCGGGCCAAGAGTGTGCTGAAGAAGCTGCGCGGGACGGC
GGACGTGACCCGCGACCTGCAGGAGATGAAGGAGGAGAGTCGGCAGATGATGCGGGAGAAGAAG
GTCACCATCCTGGAGCTGTTCCGCTCGCCCGCCTACCGCCAGCCCATCCTCATCGCCGTGGTGC
TGCAGCTGTCCCAGCAGCTGTCGGGCATCAATGCTGTCTTCTATTACTCCACAAGCATCTTCGA
GAAGGCGGGGGTGCAGCAGCCCGTGTATGCCACCATCGGCTCCGGCATCGTGAACACGGCCTTC
ACCGTGGTGTCGCTGTTCGTGGTGGAACGCGCCGGCCGGCGGACCCTGCACCTCATAGGCCTGG
CTGGCATGGCGGGCTGTGCCGTGCTCATGACCATCGCGCTGGCGCTGCTGGAACAACTGCCCTG
GATGTCGTATCTCAGCATCGTGGCCATCTTTGGCTTTGTGGCCTTCTTTGAAGTGGGCCCTGGC
CCCATCCCATGGTTCATTGTGGCTGAACTCTTCAGCCAGGGTCCTCGCCCAGCTGCCATTGCTG
TTGCTGGCTTCTCCAACTGGACCTCAAATTTCATTGTGGGCATGTGCTTCCAGTATGTAGAGCA
ACTGTGTGGTCCGTACGTCTTCATCATCTTCACCGTGCTCCTGGTTCTGTTCTTCATCTTCACC
TACTTCAAAGTTCCTGAGACCAAAGGCCGGACCTTTGATGAGATTGCTTCCGGTTTCCGGCAGG
GGGGAGCCAGTCAAAGTGACAAGACACCCGAGGAGCTCTTCCACCCCCTGGGGGCCGATTCCCA
AGTGTGAGGCGCCCCACACCACCAGCCTGGCCTGCTCCCAGCAGCTCCAAGGATCTCTCGGAGC
ACAGGCAGCTGGATGCGATTTCCAAACTGACAGATTTCAGCAGAGCTGGGCCTGGGGCTCCTTT
GTTCAGCCAACAATGATGTCCAGAAGAGTATTCAGGACTTCTATGGCTCCAGGATTTTAACAAA
AACAAGACTGTTGCTCAGATCTATGCAGACAAGCAACAAGTTTTATAATTTTTTTATTACTGAT
TTTGTTATTATTTTTTTATCAGCCAGAGTCCCCTGTATCTACACCCCAGACTTCACCCCGAATG
GCTCAGTACCTGAAGGTGGGGACCAAGTCCTGCCTAGACACTTGCCTTCTTCACCACGCTAATC
TGTAGGGCTGGACCTATGACCAAGGACACACTAATCGAACTATGAACTATGCTGCTTCTACCCC
AAGAGGTAGCTGTGGCCACTCTCTTCTGAGGCCTGGATCTTCCTACCCTGAGGGTCAGGCTCCA
TTAGGGTTCGCCCTTATCCATCTCTTCCTGCCCAACCACTCAAAGTAATTTTGCCTTGCCTGAG
ACCAGTTGAGAGCACTGGAGTGCAGGGAGGAAAGGGGAAGGGCCAGACTGGGCTACCAGCTTCT
AGTCTCCTTTGCACTGAGGGCCAGACGATCACCATGAGAGGAGGGCCATGGGAGGCTGAGAATT
CACTGCTCAAGAAGACATGGACACTCCTGCCCTGCTGTGTATAGATGGAAGATATTTATATATA
TTTTTGGTTGTCAATATTAAATACAGACACTAAGTTATAGTATATCTGGACAAACCAACTTGTA
AATACACCACCTTACTCCTTCTGTAACTTACCTAAACAGATATAAATGGCTGGTTTTTAGAAAA
AAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_038687191 ⟹ XP_038543119

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	568,500 - 575,271 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001152798	(Get FASTA)	NCBI Sequence Viewer
	XP_038543119	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	ACO34816	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000003651.4
	ENSCAFP00000067822.1
	ENSCAFP00030038643.1
	ENSCAFP00030038678.1
	ENSCAFP00040013939.1
	ENSCAFP00040013952.1
	ENSCAFP00040013982.1
	ENSCAFP00845021451
	ENSCAFP00845021451.1
	ENSCAFP00845021465.1

RefSeq Acc Id:

NP_001152798 ⟸ NM_001159326

- UniProtKB:

A0A8C0QL50 (UniProtKB/TrEMBL), A0A8I3NRK7 (UniProtKB/TrEMBL), A0A8C0S0S7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEPGSKKLTGRLMLAVGGAVLGSLQFGYNTGVINAPQKVIEEFYNQTWIHRYQESISPTTLTTL
WSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSSVLMGFSKLAKSFEMLILGRFI
IGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNEDLWPLLLSV
IFIPALLQCVLLPLCPESPRFLLINRNEENRAKSVLKKLRGTADVTRDLQEMKEESRQMMREKK
VTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIVNTAF
TVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQLPWMSYLSIVAIFGFVAFFEVGPG
PIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFIFT
YFKVPETKGRTFDEIASGFRQGGASQSDKTPEELFHPLGADSQV

hide sequence

RefSeq Acc Id:

ENSCAFP00000003651 ⟸ ENSCAFT00000003950

RefSeq Acc Id:	XP_038543119 ⟸ XM_038687191
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0JLD0 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845021451 ⟸ ENSCAFT00845027263

RefSeq Acc Id:

ENSCAFP00845021465 ⟸ ENSCAFT00845027278

Protein Domains

Major facilitator superfamily (MFS) profile

Promoters

RGD ID:

13685832

Promoter ID:

EPDNEW_C3901

Type:

multiple initiation site

Name:

SLC2A1_1

Description:

solute carrier family 2 member 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	463,957 - 464,017	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000002500	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030024078	UniProtKB/TrEMBL
	ENSCAFG00040008631	UniProtKB/TrEMBL
	ENSCAFG00845015278	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000003950.5	UniProtKB/TrEMBL
	ENSCAFT00000104817.1	UniProtKB/TrEMBL
	ENSCAFT00030044283.1	UniProtKB/TrEMBL
	ENSCAFT00030044320.1	UniProtKB/TrEMBL
	ENSCAFT00040016093.1	UniProtKB/TrEMBL
	ENSCAFT00040016111.1	UniProtKB/TrEMBL
	ENSCAFT00040016146.1	UniProtKB/TrEMBL
	ENSCAFT00845027263	ENTREZGENE
	ENSCAFT00845027263.1	UniProtKB/TrEMBL
	ENSCAFT00845027278.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1250.20	UniProtKB/TrEMBL
InterPro	Glu_transpt_1	UniProtKB/TrEMBL
	GLUT	UniProtKB/TrEMBL
	MFS_dom	UniProtKB/TrEMBL
	MFS_sugar_transport-like	UniProtKB/TrEMBL
	MFS_trans_sf	UniProtKB/TrEMBL
	Sugar/inositol_transpt	UniProtKB/TrEMBL
	Sugar_transporter_CS	UniProtKB/TrEMBL
KEGG Report	cfa:482437	UniProtKB/TrEMBL
NCBI Gene	SLC2A1	ENTREZGENE
PANTHER	PTHR23503	UniProtKB/TrEMBL
	SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER MEMBER 1	UniProtKB/TrEMBL
Pfam	Sugar_tr	UniProtKB/TrEMBL
PRINTS	GLUCTRSPORT1	UniProtKB/TrEMBL
	SUGRTRNSPORT	UniProtKB/TrEMBL
PROSITE	MFS	UniProtKB/TrEMBL
	SUGAR_TRANSPORT_1	UniProtKB/TrEMBL
	SUGAR_TRANSPORT_2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF103473	UniProtKB/TrEMBL
UniProt	A0A8C0JLD0	ENTREZGENE
	A0A8C0QL50	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0QMS0_CANLF	UniProtKB/TrEMBL
	A0A8C0S0S7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NM58_CANLF	UniProtKB/TrEMBL
	A0A8I3NRK7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0N5I3_CANLF	UniProtKB/TrEMBL
	A0A8P0TJI1_CANLF	UniProtKB/TrEMBL
	C1K5F4_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:46337	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - SMPDB

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - SMPDB

Imported Annotations - PID (archival)