UVSSA (UV stimulated scaffold protein A)

Gene: UVSSA (UV stimulated scaffold protein A) Pan paniscus

Analyze

Symbol:

UVSSA

Name:

UV stimulated scaffold protein A

RGD ID:

12046230

Description:

ENCODES a protein that exhibits RNA polymerase II complex binding (inferred); INVOLVED IN protein ubiquitination (inferred); response to UV (inferred); transcription-coupled nucleotide-excision repair (inferred); ASSOCIATED WITH cherubism (ortholog); genetic disease (ortholog); UV-sensitive syndrome (ortholog); FOUND IN chromosome (inferred); nucleoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

UV-stimulated scaffold protein A

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	1,675,775 - 1,730,773 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	1,647,029 - 1,697,904 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	1,492,716 - 1,532,114 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	1,373,342 - 1,414,370 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	1,373,562 - 1,413,982 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

cherubism (ISO)

genetic disease (ISO)

UV-sensitive syndrome (ISO)

UV-Sensitive Syndrome 3 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

protein ubiquitination (IEA)

response to UV (IEA)

transcription-coupled nucleotide-excision repair (IEA)

Cellular Component

chromosome (IEA)

nucleoplasm (IEA)

Molecular Function

protein binding (ISO)

RNA polymerase II complex binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

UVSSA
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	1,675,775 - 1,730,773 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	1,647,029 - 1,697,904 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	1,492,716 - 1,532,114 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	1,373,342 - 1,414,370 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	1,373,562 - 1,413,982 (+)	Ensembl	panpan1.1		panPan2

UVSSA
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	1,342,011 - 1,395,989 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	1,345,691 - 1,395,989 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	1,340,996 - 1,381,837 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	1,331,104 - 1,371,732 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Cytogenetic Map	4	p16.3	NCBI
HuRef	4	1,308,628 - 1,349,495 (+)	NCBI		HuRef
CHM1_1	4	1,340,917 - 1,381,652 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	4	1,340,627 - 1,394,173 (+)	NCBI		T2T-CHM13v2.0

Uvssa
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	33,535,868 - 33,578,243 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	33,535,893 - 33,577,098 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	33,378,523 - 33,420,899 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	33,378,549 - 33,419,754 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	33,721,345 - 33,762,403 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	33,695,553 - 33,739,362 (+)	NCBI		MGSCv36	mm8
Celera	5	30,857,971 - 30,898,922 (+)	NCBI		Celera
Cytogenetic Map	5	B1	NCBI
cM Map	5	17.6	NCBI

Uvssa
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	81,535,179 - 81,576,444 (-)	NCBI		GRCr8
mRatBN7.2	14	77,309,188 - 77,351,922 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	77,314,056 - 77,351,903 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	81,767,777 - 81,803,602 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	83,008,324 - 83,044,153 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	79,453,658 - 79,489,481 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	82,621,028 - 82,658,912 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	82,623,050 - 82,658,891 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	14	80,605,796 - 80,625,363 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	83,306,349 - 83,344,222 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	83,163,555 - 83,199,401 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	83,172,596 - 83,201,792 (+)	NCBI
Celera	14	76,235,354 - 76,271,195 (-)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

Uvssa
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955514	728,522 - 756,348 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955514	725,257 - 754,274 (+)	NCBI	ChiLan1.0	ChiLan1.0

UVSSA
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	62,647,992 - 62,674,830 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	62,649,207 - 62,674,884 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	65,164,269 - 65,191,104 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	63,123,038 - 63,149,871 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	63,122,139 - 63,149,785 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	62,615,036 - 62,641,849 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	62,818,473 - 62,845,272 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	63,177,842 - 63,204,679 (-)	NCBI		UU_Cfam_GSD_1.0

Uvssa
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405285	68,216,400 - 68,250,638 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936477	21,918,062 - 21,950,904 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936477	21,918,091 - 21,950,895 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

UVSSA
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	573,426 - 601,944 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	573,299 - 602,617 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

UVSSA
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	27	47,378,310 - 47,418,861 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	27	47,378,770 - 47,417,559 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666051	3,676,911 - 3,758,293 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Uvssa
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624755	25,903,377 - 25,930,043 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624755	25,904,273 - 25,930,564 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008963684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008963685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008963687	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008963689	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958167	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111118	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063603662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000055423 ⟹ ENSPPAP00000032554

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	4	1,373,562 - 1,413,982 (+)	Ensembl

RefSeq Acc Id:

XM_008963684 ⟹ XP_008961932

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	1,681,074 - 1,730,773 (+)	NCBI
NHGRI_mPanPan1	4	1,647,275 - 1,697,904 (+)	NCBI
Mhudiblu_PPA_v0	4	1,492,870 - 1,532,114 (+)	NCBI
PanPan1.1	4	1,373,562 - 1,413,982 (+)	NCBI

Sequence:

show sequence

TTCGGTCCCCGGGGCTCTGCGGGCGCCGGGCAGAGACCTGCGGCCAGGGCGTGTCCGTGTGCCC
GAGAGCGCCGGCGGCGGGGCCGGAGGGCGGGCCCTGGGCCGAGTGACAGGCCGCAGCCCCCCGA
GCACCGTCGAAGCCGGCGCGCCCGCCCGGTGCAGCCGCTGTGCGAGAGCGACCCCGCGGTCCAA
GCCTCGCGTGGCCCTACCGGGCCCCTTCTTTCCCCGGATATGGATCAGAAACTTTCGAAGTTGG
TAGAAGAGCTCACAACTTCAGGAGAACCCCGACTAAATCCTGAGAAAATGAAGGAACTGAAGAA
AATTTGCAAGTCTTCAGAGGAGCAGCTGAGCCGCGCCTACCGCCTGCTGATAGCACAGCTGACC
CAGGAGCACGCCGAGATCCGTCTCTCAGCCTTCCAGATCGTGGAGGAACTCTTCGTCAGGTCTC
ACCAGTTCCGGATGCTGGTTGTTTCCAACTTCCAGGAGTTCCTGGAGCTCACGCTGGGCACAGA
CCCCGCACAGCCTCTGCCGCCCCCCAGGGAGGCGGCACAGAGGCTGAGGCAGGCGACCACCCGG
GCCGTGGAAGGGTGGAATGAGAAGTTCGGGGAGGCCTACAAGAAGCTTGCCTTGGGCTACCACT
TCTTAAGACACAACAAAAAGGTGGATTTTCAAGACACGAATGCTCGGAGTCTGGCAGAAAGGAA
GAGAGAAGAGGAGAAGCAGAAGCACTTGGATAAAATTTATCAAGAAAGAGCCAGCCAGGCAGAG
AGGGAGATGCAAGAAATGTCTGGAGAAATTGAATCCTGCTTGACGGAGGTAGAGAGCTGCTTTA
GGCTGCTGGTGCCTTTTGACTTTGACCCGAACCCGGAGACGGAATCCCTTGGCGTGGCTTCTGG
CATGTCCGATGCCCTTCGCTCCTCCTGCGCGGGCCAGGTGGGCCCTTGCCGGTCTGGCACCCCT
GACCCCCGGGACGGGGAGCAGCCCTGCTGCAGTAGAGACCTGCCTGCCTCTGCAGGCCACCCCA
GAGCGGGCGGCGGGGCACAGCCATCCCAGACAGCCACAGGTGACCCCTCAGATGAGGACGAGGA
CAGCGACCTCGAGGAGTTTGTGCGGAGCCACGGGCTGGGCTCGCACAAGTACACGCTGGATGTG
GAGCTCTGCTCAGAGGGCCTGAAGGTGCAGGAGAACGAGGACAACCTTGCTCTCATCCATGCCG
CCCGCGACACACTCAAGCTCATCCGGAACAAGTTCCTGCCGGCTGTGTGCTCGTGGATCCAGCG
CTTCACCCGCGTCGGGACCCACGGTGGATGTTTAAAGCGTGCCATTGACCTGAAGGCTGAATTG
GAGCTCGTACTGAGAAAATACAAGGAGCTGGACATCGAGCCTGAGGGAGAGGAAAGGCACAGGA
CAGAAGCCCTGGGGGATGCGGAGGAAGATGAGGACGATGAGGACTTTGTGGAGGTCCCTGAGAA
GGAGGGGTATGAGCCCCACATCCCCGACCACCTGCGGCCTGAGTATGGGCTGGAGGCAGCACCA
GAGAAAGACACAGTTGTGTGGTGCTTGCGGACGAGGACGAGGATGGACGAGGAGGTGTCGGACC
CCACCTCTGCGGCTGCTCAGCTGCGGCAGCTCCGGGACCACTTGCTTCCACCCTCATCTGCCAG
CCCCTCCAGAGCGTTGCCAGAGCCACAGGAGGCCCAGAAGCTGGCAGCAGAGCGGGCCCGGGCG
CCTGTGGTGCCCTACGGCGTGGACCTGCACTACTGGGGCCAGGAGCTCCTCACAGCCGGGAAGA
TTGTCAAGTCTGACTCCCAGCACCGCTTCTGGAAGCCCAGCGAGGTGGAGGAGGAAGTGGTCAA
TGCCGACATCTCCGAGATGCTCCGGAGCCGCCACATCACTTTTGCCGGGAAGTTTGAGCCTGTG
CAGCACCGGTGCCGTGCCCCGAGGCCAGACGGCCGGCTCTGTGAGCGCCAAGACCGGCTGAAGT
GCCCTTTCCATGGGAAGATTGTTCCAAGGGACGATGAAGGACGGCCACTCGACCCGGAAGACAG
GGCTCGCGAGCAGCGGCGGCAGCTGCAGAAGCAGGAGCGCCCAGAATGGCAGGACCCTGAGTTG
ATGAGAGACGTGGAAGCAGCCACAGGGCAGGATCTCGGCTCGTCCAGGTATAGCGGGAAAGGCA
GGGGGAAGAAGAGGAGGTACCCCAGCCTCACCAACCTGAAGGCTCAGGCTGATACCGCCCGCGC
TCGCATTGGGAGAAAAGTCTTTGCCAAGGCAGCTGTGCGGAGGGTAGTGGCAGCCATGAACCGG
ATGGACCAGAAGAAGCACGAGAAGTTTTCAAACCAGTTTAACTACGCACTGAACTAGAGAGCGG
GGCCCAGTGCACTGGCCATCAGCACTTTCTCCCTCTGCCAGTGTCTCAGGACAGCAGAGTGGGC
GTGGGTCTGGGCAGTAACCATGCTTTGTCTATTACTGTGTTTGATGTAAAGAAATGGTGCGTTG
CAATGCCCTGAAGGTACGGCCGCTCTGCTGCTACAGGGTTCGGCATCGTCTGGTGATGGGTCTG
GCCTCGCAGAAGAGGCCCTCGGGCCTGGAGATGTGAACACAGGCAGCGACCCTGTTCCAGAGGG
CTTCTGCGAGTCCTCGTGAGGCCAGTGCGTGTCGTGGTGTGGGGTTCAGCACGGACGGAATGTG
TGTGCAGCTCAGCCTTCAGAGCGTGCATTCCCCAGCCAGGAGGCGACCACTCAGAGGAACTCTG
GGAAACCCACTTTTGTGCAAATGCTGTTTTTAACACAAACACAAAGGCTAGTGAACCGTTCA

hide sequence

RefSeq Acc Id:

XM_008963685 ⟹ XP_008961933

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	1,680,863 - 1,730,773 (+)	NCBI
NHGRI_mPanPan1	4	1,647,032 - 1,697,904 (+)	NCBI
Mhudiblu_PPA_v0	4	1,492,716 - 1,532,114 (+)	NCBI
PanPan1.1	4	1,373,342 - 1,413,982 (+)	NCBI

Sequence:

show sequence

GGGGCAACGGCGAGAAAGGCCGCGTCGAGCGGTAGGTGCAGTCGTCGCCGTGGTGACCCCAGGT
CCTGATGCGTCCGGCCCAGGGCCAGCCAATGGCGGTAGAGGTCTTGGGCACCTGACAAGAGGGG
CGGTCCCCCCGCCGGAAGGGGCGGGGCGAGGCAAGCGGCCGCGTCAGCGATATGGATCAGAAAC
TTTCGAAGTTGGTAGAAGAGCTCACAACTTCAGGAGAACCCCGACTAAATCCTGAGAAAATGAA
GGAACTGAAGAAAATTTGCAAGTCTTCAGAGGAGCAGCTGAGCCGCGCCTACCGCCTGCTGATA
GCACAGCTGACCCAGGAGCACGCCGAGATCCGTCTCTCAGCCTTCCAGATCGTGGAGGAACTCT
TCGTCAGGTCTCACCAGTTCCGGATGCTGGTTGTTTCCAACTTCCAGGAGTTCCTGGAGCTCAC
GCTGGGCACAGACCCCGCACAGCCTCTGCCGCCCCCCAGGGAGGCGGCACAGAGGCTGAGGCAG
GCGACCACCCGGGCCGTGGAAGGGTGGAATGAGAAGTTCGGGGAGGCCTACAAGAAGCTTGCCT
TGGGCTACCACTTCTTAAGACACAACAAAAAGGTGGATTTTCAAGACACGAATGCTCGGAGTCT
GGCAGAAAGGAAGAGAGAAGAGGAGAAGCAGAAGCACTTGGATAAAATTTATCAAGAAAGAGCC
AGCCAGGCAGAGAGGGAGATGCAAGAAATGTCTGGAGAAATTGAATCCTGCTTGACGGAGGTAG
AGAGCTGCTTTAGGCTGCTGGTGCCTTTTGACTTTGACCCGAACCCGGAGACGGAATCCCTTGG
CGTGGCTTCTGGCATGTCCGATGCCCTTCGCTCCTCCTGCGCGGGCCAGGTGGGCCCTTGCCGG
TCTGGCACCCCTGACCCCCGGGACGGGGAGCAGCCCTGCTGCAGTAGAGACCTGCCTGCCTCTG
CAGGCCACCCCAGAGCGGGCGGCGGGGCACAGCCATCCCAGACAGCCACAGGTGACCCCTCAGA
TGAGGACGAGGACAGCGACCTCGAGGAGTTTGTGCGGAGCCACGGGCTGGGCTCGCACAAGTAC
ACGCTGGATGTGGAGCTCTGCTCAGAGGGCCTGAAGGTGCAGGAGAACGAGGACAACCTTGCTC
TCATCCATGCCGCCCGCGACACACTCAAGCTCATCCGGAACAAGTTCCTGCCGGCTGTGTGCTC
GTGGATCCAGCGCTTCACCCGCGTCGGGACCCACGGTGGATGTTTAAAGCGTGCCATTGACCTG
AAGGCTGAATTGGAGCTCGTACTGAGAAAATACAAGGAGCTGGACATCGAGCCTGAGGGAGAGG
AAAGGCACAGGACAGAAGCCCTGGGGGATGCGGAGGAAGATGAGGACGATGAGGACTTTGTGGA
GGTCCCTGAGAAGGAGGGGTATGAGCCCCACATCCCCGACCACCTGCGGCCTGAGTATGGGCTG
GAGGCAGCACCAGAGAAAGACACAGTTGTGTGGTGCTTGCGGACGAGGACGAGGATGGACGAGG
AGGTGTCGGACCCCACCTCTGCGGCTGCTCAGCTGCGGCAGCTCCGGGACCACTTGCTTCCACC
CTCATCTGCCAGCCCCTCCAGAGCGTTGCCAGAGCCACAGGAGGCCCAGAAGCTGGCAGCAGAG
CGGGCCCGGGCGCCTGTGGTGCCCTACGGCGTGGACCTGCACTACTGGGGCCAGGAGCTCCTCA
CAGCCGGGAAGATTGTCAAGTCTGACTCCCAGCACCGCTTCTGGAAGCCCAGCGAGGTGGAGGA
GGAAGTGGTCAATGCCGACATCTCCGAGATGCTCCGGAGCCGCCACATCACTTTTGCCGGGAAG
TTTGAGCCTGTGCAGCACCGGTGCCGTGCCCCGAGGCCAGACGGCCGGCTCTGTGAGCGCCAAG
ACCGGCTGAAGTGCCCTTTCCATGGGAAGATTGTTCCAAGGGACGATGAAGGACGGCCACTCGA
CCCGGAAGACAGGGCTCGCGAGCAGCGGCGGCAGCTGCAGAAGCAGGAGCGCCCAGAATGGCAG
GACCCTGAGTTGATGAGAGACGTGGAAGCAGCCACAGGGCAGGATCTCGGCTCGTCCAGGTATA
GCGGGAAAGGCAGGGGGAAGAAGAGGAGGTACCCCAGCCTCACCAACCTGAAGGCTCAGGCTGA
TACCGCCCGCGCTCGCATTGGGAGAAAAGTCTTTGCCAAGGCAGCTGTGCGGAGGGTAGTGGCA
GCCATGAACCGGATGGACCAGAAGAAGCACGAGAAGTTTTCAAACCAGTTTAACTACGCACTGA
ACTAGAGAGCGGGGCCCAGTGCACTGGCCATCAGCACTTTCTCCCTCTGCCAGTGTCTCAGGAC
AGCAGAGTGGGCGTGGGTCTGGGCAGTAACCATGCTTTGTCTATTACTGTGTTTGATGTAAAGA
AATGGTGCGTTGCAATGCCCTGAAGGTACGGCCGCTCTGCTGCTACAGGGTTCGGCATCGTCTG
GTGATGGGTCTGGCCTCGCAGAAGAGGCCCTCGGGCCTGGAGATGTGAACACAGGCAGCGACCC
TGTTCCAGAGGGCTTCTGCGAGTCCTCGTGAGGCCAGTGCGTGTCGTGGTGTGGGGTTCAGCAC
GGACGGAATGTGTGTGCAGCTCAGCCTTCAGAGCGTGCATTCCCCAGCCAGGAGGCGACCACTC
AGAGGAACTCTGGGAAACCCACTTTTGTGCAAATGCTGTTTTTAACACAAACACAAAGGCTAGT
GAACCGTTCA

hide sequence

RefSeq Acc Id:

XM_008963689 ⟹ XP_008961937

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	1,686,344 - 1,730,773 (+)	NCBI
NHGRI_mPanPan1	4	1,651,864 - 1,697,904 (+)	NCBI
Mhudiblu_PPA_v0	4	1,498,152 - 1,532,114 (+)	NCBI
PanPan1.1	4	1,378,318 - 1,413,982 (+)	NCBI

Sequence:

show sequence

GGCCCTGCCACCTATTTATTTTGTGGCTGCCTTGCCCTTGCCAGCCCCTTCCCCAAAACTTCAC
TGTTTGCTTCTCGGCAGTCAGCCTTTCTTGTGAGGGGCACCACGAGAGTGTGAGGAGGGGGTGC
CACGGCCCTCCTGAGACACCTCCTGATGTGGGCGGAGGCACGGCCCTGTGTATTCAGACTACAT
GTACCCCAGATCCTTCTCCTGACAGACGGTGGTCCCAGGTGTGGGCCCTGCCACAGGCCACTGG
AAACGCAGGCCTCAGGGGAGCTCACAAGGCAGGCAGCTGGGTGCCCAGACAATGAGGAGGCTGC
CAGGAGGAAAGCTGCTCCAGCCCGGGAGGTGTGGCATGAACGAGGCTGTTTTGTTGCCCTAGGG
AAGAGGTGCAGCCATGTCCTGGGAAGTGCAGAAATGTCTGGAGAAATTGAATCCTGCTTGACGG
AGGTAGAGAGCTGCTTTAGGCTGCTGGTGCCTTTTGACTTTGACCCGAACCCGGAGACGGAATC
CCTTGGCGTGGCTTCTGGCATGTCCGATGCCCTTCGCTCCTCCTGCGCGGGCCAGGTGGGCCCT
TGCCGGTCTGGCACCCCTGACCCCCGGGACGGGGAGCAGCCCTGCTGCAGTAGAGACCTGCCTG
CCTCTGCAGGCCACCCCAGAGCGGGCGGCGGGGCACAGCCATCCCAGACAGCCACAGGTGACCC
CTCAGATGAGGACGAGGACAGCGACCTCGAGGAGTTTGTGCGGAGCCACGGGCTGGGCTCGCAC
AAGTACACGCTGGATGTGGAGCTCTGCTCAGAGGGCCTGAAGGTGCAGGAGAACGAGGACAACC
TTGCTCTCATCCATGCCGCCCGCGACACACTCAAGCTCATCCGGAACAAGTTCCTGCCGGCTGT
GTGCTCGTGGATCCAGCGCTTCACCCGCGTCGGGACCCACGGTGGATGTTTAAAGCGTGCCATT
GACCTGAAGGCTGAATTGGAGCTCGTACTGAGAAAATACAAGGAGCTGGACATCGAGCCTGAGG
GAGAGGAAAGGCACAGGACAGAAGCCCTGGGGGATGCGGAGGAAGATGAGGACGATGAGGACTT
TGTGGAGGTCCCTGAGAAGGAGGGGTATGAGCCCCACATCCCCGACCACCTGCGGCCTGAGTAT
GGGCTGGAGGCAGCACCAGAGAAAGACACAGTTGTGTGGTGCTTGCGGACGAGGACGAGGATGG
ACGAGGAGGTGTCGGACCCCACCTCTGCGGCTGCTCAGCTGCGGCAGCTCCGGGACCACTTGCT
TCCACCCTCATCTGCCAGCCCCTCCAGAGCGTTGCCAGAGCCACAGGAGGCCCAGAAGCTGGCA
GCAGAGCGGGCCCGGGCGCCTGTGGTGCCCTACGGCGTGGACCTGCACTACTGGGGCCAGGAGC
TCCTCACAGCCGGGAAGATTGTCAAGTCTGACTCCCAGCACCGCTTCTGGAAGCCCAGCGAGGT
GGAGGAGGAAGTGGTCAATGCCGACATCTCCGAGATGCTCCGGAGCCGCCACATCACTTTTGCC
GGGAAGTTTGAGCCTGTGCAGCACCGGTGCCGTGCCCCGAGGCCAGACGGCCGGCTCTGTGAGC
GCCAAGACCGGCTGAAGTGCCCTTTCCATGGGAAGATTGTTCCAAGGGACGATGAAGGACGGCC
ACTCGACCCGGAAGACAGGGCTCGCGAGCAGCGGCGGCAGCTGCAGAAGCAGGAGCGCCCAGAA
TGGCAGGACCCTGAGTTGATGAGAGACGTGGAAGCAGCCACAGGGCAGGATCTCGGCTCGTCCA
GGTATAGCGGGAAAGGCAGGGGGAAGAAGAGGAGGTACCCCAGCCTCACCAACCTGAAGGCTCA
GGCTGATACCGCCCGCGCTCGCATTGGGAGAAAAGTCTTTGCCAAGGCAGCTGTGCGGAGGGTA
GTGGCAGCCATGAACCGGATGGACCAGAAGAAGCACGAGAAGTTTTCAAACCAGTTTAACTACG
CACTGAACTAGAGAGCGGGGCCCAGTGCACTGGCCATCAGCACTTTCTCCCTCTGCCAGTGTCT
CAGGACAGCAGAGTGGGCGTGGGTCTGGGCAGTAACCATGCTTTGTCTATTACTGTGTTTGATG
TAAAGAAATGGTGCGTTGCAATGCCCTGAAGGTACGGCCGCTCTGCTGCTACAGGGTTCGGCAT
CGTCTGGTGATGGGTCTGGCCTCGCAGAAGAGGCCCTCGGGCCTGGAGATGTGAACACAGGCAG
CGACCCTGTTCCAGAGGGCTTCTGCGAGTCCTCGTGAGGCCAGTGCGTGTCGTGGTGTGGGGTT
CAGCACGGACGGAATGTGTGTGCAGCTCAGCCTTCAGAGCGTGCATTCCCCAGCCAGGAGGCGA
CCACTCAGAGGAACTCTGGGAAACCCACTTTTGTGCAAATGCTGTTTTTAACACAAACACAAAG
GCTAGTGAACCGTTCA

hide sequence

RefSeq Acc Id:

XM_055111118 ⟹ XP_054967093

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	1,680,861 - 1,730,773 (+)	NCBI
NHGRI_mPanPan1	4	1,647,054 - 1,697,904 (+)	NCBI

RefSeq Acc Id:

XM_063603662 ⟹ XP_063459732

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	1,675,775 - 1,730,773 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_008961932	(Get FASTA)	NCBI Sequence Viewer
	XP_008961933	(Get FASTA)	NCBI Sequence Viewer
	XP_008961937	(Get FASTA)	NCBI Sequence Viewer
	XP_054967093	(Get FASTA)	NCBI Sequence Viewer
	XP_063459732	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000032554.1

RefSeq Acc Id:

XP_008961933 ⟸ XM_008963685

- Peptide Label:

isoform X1

- Sequence:

show sequence

MDQKLSKLVEELTTSGEPRLNPEKMKELKKICKSSEEQLSRAYRLLIAQLTQEHAEIRLSAFQI
VEELFVRSHQFRMLVVSNFQEFLELTLGTDPAQPLPPPREAAQRLRQATTRAVEGWNEKFGEAY
KKLALGYHFLRHNKKVDFQDTNARSLAERKREEEKQKHLDKIYQERASQAEREMQEMSGEIESC
LTEVESCFRLLVPFDFDPNPETESLGVASGMSDALRSSCAGQVGPCRSGTPDPRDGEQPCCSRD
LPASAGHPRAGGGAQPSQTATGDPSDEDEDSDLEEFVRSHGLGSHKYTLDVELCSEGLKVQENE
DNLALIHAARDTLKLIRNKFLPAVCSWIQRFTRVGTHGGCLKRAIDLKAELELVLRKYKELDIE
PEGEERHRTEALGDAEEDEDDEDFVEVPEKEGYEPHIPDHLRPEYGLEAAPEKDTVVWCLRTRT
RMDEEVSDPTSAAAQLRQLRDHLLPPSSASPSRALPEPQEAQKLAAERARAPVVPYGVDLHYWG
QELLTAGKIVKSDSQHRFWKPSEVEEEVVNADISEMLRSRHITFAGKFEPVQHRCRAPRPDGRL
CERQDRLKCPFHGKIVPRDDEGRPLDPEDRAREQRRQLQKQERPEWQDPELMRDVEAATGQDLG
SSRYSGKGRGKKRRYPSLTNLKAQADTARARIGRKVFAKAAVRRVVAAMNRMDQKKHEKFSNQF
NYALN

hide sequence

RefSeq Acc Id:

XP_008961932 ⟸ XM_008963684

- Peptide Label:

isoform X1

- Sequence:

show sequence

MDQKLSKLVEELTTSGEPRLNPEKMKELKKICKSSEEQLSRAYRLLIAQLTQEHAEIRLSAFQI
VEELFVRSHQFRMLVVSNFQEFLELTLGTDPAQPLPPPREAAQRLRQATTRAVEGWNEKFGEAY
KKLALGYHFLRHNKKVDFQDTNARSLAERKREEEKQKHLDKIYQERASQAEREMQEMSGEIESC
LTEVESCFRLLVPFDFDPNPETESLGVASGMSDALRSSCAGQVGPCRSGTPDPRDGEQPCCSRD
LPASAGHPRAGGGAQPSQTATGDPSDEDEDSDLEEFVRSHGLGSHKYTLDVELCSEGLKVQENE
DNLALIHAARDTLKLIRNKFLPAVCSWIQRFTRVGTHGGCLKRAIDLKAELELVLRKYKELDIE
PEGEERHRTEALGDAEEDEDDEDFVEVPEKEGYEPHIPDHLRPEYGLEAAPEKDTVVWCLRTRT
RMDEEVSDPTSAAAQLRQLRDHLLPPSSASPSRALPEPQEAQKLAAERARAPVVPYGVDLHYWG
QELLTAGKIVKSDSQHRFWKPSEVEEEVVNADISEMLRSRHITFAGKFEPVQHRCRAPRPDGRL
CERQDRLKCPFHGKIVPRDDEGRPLDPEDRAREQRRQLQKQERPEWQDPELMRDVEAATGQDLG
SSRYSGKGRGKKRRYPSLTNLKAQADTARARIGRKVFAKAAVRRVVAAMNRMDQKKHEKFSNQF
NYALN

hide sequence

RefSeq Acc Id:

XP_008961937 ⟸ XM_008963689

- Peptide Label:

isoform X2

- Sequence:

show sequence

MWAEARPCVFRLHVPQILLLTDGGPRCGPCHRPLETQASGELTRQAAGCPDNEEAARRKAAPAR
EVWHERGCFVALGKRCSHVLGSAEMSGEIESCLTEVESCFRLLVPFDFDPNPETESLGVASGMS
DALRSSCAGQVGPCRSGTPDPRDGEQPCCSRDLPASAGHPRAGGGAQPSQTATGDPSDEDEDSD
LEEFVRSHGLGSHKYTLDVELCSEGLKVQENEDNLALIHAARDTLKLIRNKFLPAVCSWIQRFT
RVGTHGGCLKRAIDLKAELELVLRKYKELDIEPEGEERHRTEALGDAEEDEDDEDFVEVPEKEG
YEPHIPDHLRPEYGLEAAPEKDTVVWCLRTRTRMDEEVSDPTSAAAQLRQLRDHLLPPSSASPS
RALPEPQEAQKLAAERARAPVVPYGVDLHYWGQELLTAGKIVKSDSQHRFWKPSEVEEEVVNAD
ISEMLRSRHITFAGKFEPVQHRCRAPRPDGRLCERQDRLKCPFHGKIVPRDDEGRPLDPEDRAR
EQRRQLQKQERPEWQDPELMRDVEAATGQDLGSSRYSGKGRGKKRRYPSLTNLKAQADTARARI
GRKVFAKAAVRRVVAAMNRMDQKKHEKFSNQFNYALN

hide sequence

RefSeq Acc Id:

ENSPPAP00000032554 ⟸ ENSPPAT00000055423

RefSeq Acc Id:	XP_054967093 ⟸ XM_055111118
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063459732 ⟸ XM_063603662
- Peptide Label:	isoform X1

Protein Domains

UV-stimulated scaffold protein A C-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000039158	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000055423.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.90	UniProtKB/TrEMBL
InterPro	ENTH_VHS	UniProtKB/TrEMBL
	UVSSA	UniProtKB/TrEMBL
	UVSSA_C	UniProtKB/TrEMBL
	UVSSA_N_a-solenoid_rpt	UniProtKB/TrEMBL
KEGG Report	pps:100974957	UniProtKB/TrEMBL
NCBI Gene	UVSSA	ENTREZGENE
PANTHER	PTHR28670	UniProtKB/TrEMBL
	UV-STIMULATED SCAFFOLD PROTEIN A	UniProtKB/TrEMBL
Pfam	DUF2043	UniProtKB/TrEMBL
	UVSSA_N	UniProtKB/TrEMBL
UniProt	A0A2R9C1F3_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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