DYM (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 17 | 66,578,224 - 66,989,529 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 18 | 52,268,524 - 52,682,132 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 18 | 42,427,493 - 42,842,450 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 18 | 45,780,831 - 46,179,616 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 18 | 45,783,379 - 46,162,835 (-) | Ensembl | panpan1.1 | | panPan2 | |
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DYM (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 18 | 49,036,387 - 49,460,645 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 18 | 49,036,387 - 49,461,347 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 18 | 46,562,757 - 46,987,015 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 18 | 44,824,170 - 45,241,077 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 18 | 44,824,169 - 45,241,077 | NCBI | | | | | Celera | 18 | 43,423,709 - 43,842,456 (-) | NCBI | | Celera | | | Cytogenetic Map | 18 | q21.1 | NCBI | | | | | HuRef | 18 | 43,422,918 - 43,840,755 (-) | NCBI | | HuRef | | | CHM1_1 | 18 | 46,565,142 - 46,982,392 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 18 | 49,231,816 - 49,658,383 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Dym (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 18 | 75,151,772 - 75,420,037 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 18 | 75,151,852 - 75,420,035 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 18 | 75,018,699 - 75,286,966 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 18 | 75,018,781 - 75,286,964 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 18 | 75,178,426 - 75,446,620 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 18 | 75,144,137 - 75,412,331 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 18 | 76,242,337 - 76,521,558 (+) | NCBI | | Celera | | | Cytogenetic Map | 18 | E3 | NCBI | | | | | cM Map | 18 | 50.97 | NCBI | | | | |
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Dym (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 18 | 70,879,835 - 71,176,006 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 18 | 68,605,131 - 68,900,905 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 18 | 68,605,185 - 68,900,903 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 18 | 70,718,041 - 71,013,638 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 18 | 71,386,410 - 71,683,811 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 18 | 69,244,060 - 69,539,675 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 18 | 70,996,074 - 71,313,033 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 18 | 70,996,044 - 71,313,084 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 18 | 70,178,416 - 70,449,688 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 18 | 71,889,053 - 72,188,251 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 18 | 71,962,174 - 72,261,226 (+) | NCBI | | | | | Celera | 18 | 66,780,263 - 67,073,707 (+) | NCBI | | Celera | | | Cytogenetic Map | 18 | q12.2 | NCBI | | | | |
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Dym (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955402 | 34,150,783 - 34,542,507 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955402 | 34,150,783 - 34,541,944 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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DYM (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 7 | 79,286,558 - 79,629,451 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 7 | 79,286,614 - 79,629,043 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 7 | 78,691,499 - 79,034,045 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 7 | 79,353,467 - 79,696,604 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 7 | 79,353,400 - 79,697,033 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 7 | 79,068,269 - 79,410,974 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 7 | 79,098,408 - 79,441,226 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 7 | 79,383,285 - 79,726,463 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Dym (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404944 | 38,237,505 - 38,575,582 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936497 | 13,476,326 - 13,818,059 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936497 | 13,476,376 - 13,816,515 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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DYM (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 98,638,339 - 99,024,642 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 98,642,506 - 99,024,664 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 108,216,906 - 108,352,210 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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DYM (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 18 | 31,513,665 - 31,902,064 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 18 | 31,513,735 - 31,901,811 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666050 | 5,734,433 - 6,137,618 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Dym (Heterocephalus glaber - naked mole-rat) |
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