TG (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 7 | 150,253,626 - 150,524,100 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 125,768,221 - 126,038,630 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 129,519,431 - 129,789,699 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 8 | 132,495,516 - 132,764,918 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 8 | 132,495,516 - 132,764,918 (+) | Ensembl | panpan1.1 | | panPan2 | |
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TG (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 8 | 132,866,958 - 133,134,899 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 132,866,958 - 133,134,903 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 8 | 133,879,203 - 134,147,143 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 133,948,387 - 134,216,325 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 8 | 133,948,386 - 134,216,325 | NCBI | | | | | Celera | 8 | 130,055,026 - 130,324,401 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | q24.22 | NCBI | | | | | HuRef | 8 | 129,197,896 - 129,466,621 (+) | NCBI | | HuRef | | | CHM1_1 | 8 | 133,919,854 - 134,187,744 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 133,990,136 - 134,258,223 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Tg (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 15 | 66,542,606 - 66,722,570 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 15 | 66,542,602 - 66,722,570 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 15 | 66,670,754 - 66,850,721 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 15 | 66,670,753 - 66,850,721 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 15 | 66,502,332 - 66,682,283 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 15 | 66,500,461 - 66,680,276 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 15 | 68,203,057 - 68,383,403 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | D2 | NCBI | | | | | cM Map | 15 | 29.3 | NCBI | | | | |
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Tg (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 7 | 100,307,349 - 100,492,246 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 98,418,293 - 98,603,210 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 98,418,293 - 98,603,210 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 100,178,793 - 100,363,327 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 102,380,454 - 102,564,998 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 102,299,801 - 102,484,333 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 107,467,260 - 107,652,897 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 107,467,260 - 107,652,899 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 107,399,165 - 107,602,400 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 104,035,776 - 104,220,754 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 104,070,005 - 104,254,984 (+) | NCBI | | | | | Celera | 7 | 94,970,745 - 95,154,294 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | q33 | NCBI | | | | |
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Tg (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955461 | 7,487,322 - 7,703,363 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955461 | 7,487,268 - 7,703,458 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TG (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 13 | 29,350,726 - 29,597,908 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 13 | 29,350,688 - 29,598,040 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 13 | 29,323,440 - 29,571,872 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 13 | 29,705,326 - 29,954,007 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 13 | 29,705,417 - 29,953,970 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 13 | 29,431,959 - 29,680,604 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 13 | 29,532,359 - 29,781,038 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 13 | 29,844,402 - 30,129,590 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Tg (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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TG (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 4 | 8,158,396 - 8,382,435 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 8,158,395 - 8,382,435 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 8,078,824 - 8,424,733 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TG (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 8 | 127,293,797 - 127,567,218 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 127,293,834 - 127,567,771 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666039 | 12,540,183 - 12,814,478 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tg (Heterocephalus glaber - naked mole-rat) |
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