MBP (myelin basic protein) - Rat Genome Database

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Gene: MBP (myelin basic protein) Pan paniscus
Analyze
Symbol: MBP
Name: myelin basic protein
RGD ID: 11970699
Description: ENCODES a protein that exhibits lipid binding (ortholog); structural constituent of myelin sheath (ortholog); INVOLVED IN membrane organization (ortholog); myelination (ortholog); negative regulation of axonogenesis (ortholog); ASSOCIATED WITH angiostrongyliasis (ortholog); Brain Hypoxia-Ischemia (ortholog); Brain Injuries (ortholog); FOUND IN cell surface (ortholog); compact myelin (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21794,522,267 - 94,651,329 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11880,214,890 - 80,343,953 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01870,369,882 - 70,526,693 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11873,628,537 - 73,781,956 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1873,629,522 - 73,755,351 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
MBP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21794,522,267 - 94,651,329 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11880,214,890 - 80,343,953 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01870,369,882 - 70,526,693 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11873,628,537 - 73,781,956 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1873,629,522 - 73,755,351 (-)Ensemblpanpan1.1panPan2
MBP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381876,978,833 - 77,133,708 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1876,978,827 - 77,133,683 (-)EnsemblGRCh38hg38GRCh38
GRCh371874,690,789 - 74,844,739 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361872,819,777 - 72,973,762 (-)NCBINCBI36Build 36hg18NCBI36
Build 341872,820,710 - 72,857,962NCBI
Celera1871,507,828 - 71,661,692 (-)NCBICelera
Cytogenetic Map18q23NCBI
HuRef1871,371,431 - 71,525,606 (-)NCBIHuRef
CHM1_11874,686,498 - 74,841,139 (-)NCBICHM1_1
T2T-CHM13v2.01877,209,381 - 77,365,381 (-)NCBIT2T-CHM13v2.0
Mbp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391882,492,883 - 82,603,762 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1882,493,271 - 82,603,762 (+)EnsemblGRCm39 Ensembl
GRCm381882,475,091 - 82,585,637 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1882,475,146 - 82,585,637 (+)EnsemblGRCm38mm10GRCm38
MGSCv371882,644,515 - 82,755,029 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361882,609,551 - 82,720,065 (+)NCBIMGSCv36mm8
Celera1883,548,320 - 83,655,575 (+)NCBICelera
Cytogenetic Map18E3NCBI
cM Map1855.84NCBI
Mbp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81878,130,652 - 78,241,174 (+)NCBIGRCr8
mRatBN7.21875,855,878 - 75,966,404 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1875,855,878 - 75,966,404 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1877,957,063 - 78,067,713 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01878,627,339 - 78,737,995 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01876,475,022 - 76,586,142 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01879,326,738 - 79,437,310 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1879,326,738 - 79,437,310 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01878,385,304 - 78,504,226 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41878,943,608 - 79,057,329 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11879,098,861 - 79,130,602 (+)NCBI
Celera1874,493,165 - 74,602,969 (+)NCBICelera
Cytogenetic Map18q12.3NCBI
Mbp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540260,323,950 - 60,441,406 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540260,324,060 - 60,448,926 (-)NCBIChiLan1.0ChiLan1.0
MBP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.112,841,801 - 2,952,553 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl12,846,589 - 2,951,860 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha13,844,963 - 3,959,816 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.012,644,339 - 2,759,352 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl12,644,344 - 2,759,352 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.112,689,655 - 2,804,648 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.012,640,084 - 2,755,067 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.012,810,294 - 2,925,302 (+)NCBIUU_Cfam_GSD_1.0
Mbp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494416,761,025 - 16,837,898 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366162,082,099 - 2,159,070 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366162,082,154 - 2,159,028 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MBP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1147,590,865 - 147,685,290 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11147,649,516 - 147,685,289 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
MBP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1182,844,154 - 2,996,640 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl182,868,795 - 2,997,046 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606022,960,760 - 23,116,155 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mbp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248063,489,681 - 3,588,335 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248063,465,881 - 3,587,428 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000036230   ⟹   ENSPPAP00000013558
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1873,629,522 - 73,667,100 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000036240   ⟹   ENSPPAP00000013567
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1873,629,684 - 73,667,100 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000036248   ⟹   ENSPPAP00000013575
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1873,630,121 - 73,667,100 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000036270   ⟹   ENSPPAP00000013597
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1873,630,161 - 73,755,351 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000036287   ⟹   ENSPPAP00000013614
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1873,630,161 - 73,755,326 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000036294   ⟹   ENSPPAP00000013621
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1873,630,161 - 73,755,326 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000036295   ⟹   ENSPPAP00000013622
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1873,630,161 - 73,667,100 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000036298   ⟹   ENSPPAP00000013625
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1873,632,397 - 73,667,100 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000036300   ⟹   ENSPPAP00000013627
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1873,638,764 - 73,667,100 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000036304   ⟹   ENSPPAP00000013631
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1873,638,792 - 73,667,100 (-)Ensembl
RefSeq Acc Id: XM_014342322   ⟹   XP_014197808
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21794,522,267 - 94,651,329 (-)NCBI
NHGRI_mPanPan11880,214,890 - 80,343,953 (-)NCBI
Mhudiblu_PPA_v01870,369,882 - 70,526,693 (-)NCBI
PanPan1.11873,629,522 - 73,781,956 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014342323   ⟹   XP_014197809
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21794,522,267 - 94,651,329 (-)NCBI
NHGRI_mPanPan11880,214,890 - 80,343,953 (-)NCBI
Mhudiblu_PPA_v01870,369,882 - 70,526,693 (-)NCBI
PanPan1.11873,629,522 - 73,781,956 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014342324   ⟹   XP_014197810
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21794,522,267 - 94,651,329 (-)NCBI
NHGRI_mPanPan11880,214,890 - 80,343,953 (-)NCBI
Mhudiblu_PPA_v01870,369,882 - 70,526,693 (-)NCBI
PanPan1.11873,629,522 - 73,781,956 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034944091   ⟹   XP_034799982
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21794,522,267 - 94,651,329 (-)NCBI
NHGRI_mPanPan11880,214,890 - 80,343,953 (-)NCBI
Mhudiblu_PPA_v01870,369,882 - 70,526,693 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_014197810   ⟸   XM_014342324
- Peptide Label: isoform X4
- UniProtKB: A0A2R9A9Q6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_014197809   ⟸   XM_014342323
- Peptide Label: isoform X2
- UniProtKB: A0A2R9A8L3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_014197808   ⟸   XM_014342322
- Peptide Label: isoform X1
- UniProtKB: A0A2R9A8L3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034799982   ⟸   XM_034944091
- Peptide Label: isoform X3
- UniProtKB: A0A2R9ADU9 (UniProtKB/TrEMBL),   A0A2R9A8L3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000013575   ⟸   ENSPPAT00000036248
RefSeq Acc Id: ENSPPAP00000013567   ⟸   ENSPPAT00000036240
RefSeq Acc Id: ENSPPAP00000013558   ⟸   ENSPPAT00000036230
RefSeq Acc Id: ENSPPAP00000013625   ⟸   ENSPPAT00000036298
RefSeq Acc Id: ENSPPAP00000013621   ⟸   ENSPPAT00000036294
RefSeq Acc Id: ENSPPAP00000013622   ⟸   ENSPPAT00000036295
RefSeq Acc Id: ENSPPAP00000013614   ⟸   ENSPPAT00000036287
RefSeq Acc Id: ENSPPAP00000013597   ⟸   ENSPPAT00000036270
RefSeq Acc Id: ENSPPAP00000013631   ⟸   ENSPPAT00000036304
RefSeq Acc Id: ENSPPAP00000013627   ⟸   ENSPPAT00000036300


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000029936 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000036230.1 UniProtKB/TrEMBL
  ENSPPAT00000036240.1 UniProtKB/TrEMBL
  ENSPPAT00000036248.1 UniProtKB/TrEMBL
  ENSPPAT00000036270.1 UniProtKB/TrEMBL
  ENSPPAT00000036287.1 UniProtKB/TrEMBL
  ENSPPAT00000036294.1 UniProtKB/TrEMBL
  ENSPPAT00000036295.1 UniProtKB/TrEMBL
  ENSPPAT00000036298.1 UniProtKB/TrEMBL
  ENSPPAT00000036300.1 UniProtKB/TrEMBL
  ENSPPAT00000036304.1 UniProtKB/TrEMBL
InterPro Myelin_BP UniProtKB/TrEMBL
NCBI Gene MBP ENTREZGENE
PANTHER MYELIN BASIC PROTEIN UniProtKB/TrEMBL
  PTHR11429 UniProtKB/TrEMBL
Pfam Myelin_MBP UniProtKB/TrEMBL
PRINTS MYELINMBP UniProtKB/TrEMBL
PROSITE MYELIN_MBP UniProtKB/TrEMBL
UniProt A0A2R9A8H2_PANPA UniProtKB/TrEMBL
  A0A2R9A8L3 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9A8M5_PANPA UniProtKB/TrEMBL
  A0A2R9A9Q6 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9A9R7_PANPA UniProtKB/TrEMBL
  A0A2R9ADI1_PANPA UniProtKB/TrEMBL
  A0A2R9ADN9_PANPA UniProtKB/TrEMBL
  A0A2R9ADU9 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9ADX5_PANPA UniProtKB/TrEMBL
  A0A2R9ADY0_PANPA UniProtKB/TrEMBL