IL1RAPL1 (interleukin 1 receptor accessory protein like 1) - Rat Genome Database

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Gene: IL1RAPL1 (interleukin 1 receptor accessory protein like 1) Pan paniscus
Analyze
Symbol: IL1RAPL1
Name: interleukin 1 receptor accessory protein like 1
RGD ID: 11970226
Description: ENCODES a protein that exhibits interleukin-1 binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); neuron differentiation (ortholog); positive regulation of dendrite morphogenesis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Developmental Disease (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: interleukin-1 receptor accessory protein-like 1
RGD Orthologs
Human
Mouse
Rat
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X30,377,318 - 31,749,055 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X30,380,692 - 31,756,778 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X21,180,693 - 22,548,122 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X28,743,801 - 30,110,177 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX28,950,521 - 30,109,286 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
IL1RAPL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X30,377,318 - 31,749,055 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X30,380,692 - 31,756,778 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X21,180,693 - 22,548,122 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X28,743,801 - 30,110,177 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX28,950,521 - 30,109,286 (+)Ensemblpanpan1.1panPan2
IL1RAPL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X28,587,446 - 29,956,718 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX28,587,446 - 29,956,718 (+)EnsemblGRCh38hg38GRCh38
GRCh37X28,605,563 - 29,974,835 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X28,515,480 - 29,884,761 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X28,365,215 - 29,734,493NCBI
CeleraX32,732,824 - 34,100,946 (+)NCBICelera
Cytogenetic MapXp21.3-p21.2NCBI
HuRefX26,346,333 - 27,710,305 (+)NCBIHuRef
CHM1_1X28,636,125 - 30,004,681 (+)NCBICHM1_1
T2T-CHM13v2.0X28,179,409 - 29,548,899 (+)NCBIT2T-CHM13v2.0
Il1rapl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X85,784,543 - 87,159,554 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX85,784,476 - 87,159,251 (-)EnsemblGRCm39 Ensembl
GRCm38X86,740,937 - 88,115,948 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX86,740,870 - 88,115,645 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X83,992,581 - 85,360,962 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X82,999,961 - 83,673,259 (-)NCBIMGSCv36mm8
CeleraX55,555,320 - 55,782,072 (-)NCBICelera
Cytogenetic MapXC1NCBI
cM MapX39.89NCBI
Il1rapl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X55,322,779 - 56,827,486 (-)NCBIGRCr8
mRatBN7.2X51,371,969 - 52,876,726 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX51,378,215 - 52,876,772 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX52,707,855 - 53,966,904 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X56,208,265 - 57,467,346 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X53,839,259 - 55,092,392 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X55,439,388 - 57,004,865 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX55,439,578 - 56,765,893 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X56,557,676 - 57,548,519 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0X55,629,811 - 55,687,317 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X73,692,262 - 74,993,367 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X73,765,553 - 74,546,358 (-)NCBI
CeleraX51,905,428 - 53,154,707 (-)NCBICelera
Cytogenetic MapXq21NCBI
IL1RAPL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X23,747,689 - 25,105,606 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX23,943,871 - 25,099,377 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX28,716,786 - 30,072,066 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X23,768,977 - 25,120,119 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX23,963,965 - 25,119,603 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X23,811,147 - 25,168,166 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X23,817,557 - 25,165,880 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X23,913,009 - 25,261,426 (+)NCBIUU_Cfam_GSD_1.0
Il1rapl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X16,779,973 - 18,009,042 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365536,055,179 - 6,099,514 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365535,063,042 - 5,824,427 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL1RAPL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX24,409,327 - 25,806,680 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X24,408,092 - 25,811,129 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X28,021,764 - 28,070,970 (+)NCBISscrofa10.2Sscrofa10.2susScr3
IL1RAPL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X27,014,769 - 28,388,176 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605628,985,163 - 30,376,870 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Il1rapl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624787268,829 - 1,291,144 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624787266,027 - 1,489,032 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008959191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000055351   ⟹   ENSPPAP00000032483
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 EnsemblX28,950,521 - 30,109,286 (+)Ensembl
RefSeq Acc Id: XM_008959191   ⟹   XP_008957439
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X30,377,318 - 31,749,055 (+)NCBI
NHGRI_mPanPan1X30,380,692 - 31,756,778 (+)NCBI
Mhudiblu_PPA_v0X21,180,693 - 22,548,122 (+)NCBI
PanPan1.1X28,743,801 - 30,110,177 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008957439 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000032483
  ENSPPAP00000032483.1
Reference Protein Sequences
RefSeq Acc Id: XP_008957439   ⟸   XM_008959191
- UniProtKB: A0A2R9BS28 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000032483   ⟸   ENSPPAT00000055351
Protein Domains
Ig-like   TIR


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000039128 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000055351.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
  3.40.50.10140 UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/TrEMBL
  IL-1_rcpt_fam UniProtKB/TrEMBL
  IL-1RAcP-like_ig UniProtKB/TrEMBL
  Immunoglobulin UniProtKB/TrEMBL
  TIR_dom UniProtKB/TrEMBL
  Toll_tir_struct_dom_sf UniProtKB/TrEMBL
NCBI Gene IL1RAPL1 ENTREZGENE
PANTHER INTERLEUKIN-1 RECEPTOR ACCESSORY PROTEIN-LIKE 1 UniProtKB/TrEMBL
  PTHR11890 UniProtKB/TrEMBL
Pfam Ig_6 UniProtKB/TrEMBL
  PF00047 UniProtKB/TrEMBL
  TIR UniProtKB/TrEMBL
PRINTS INTRLKN1R1F UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/TrEMBL
  TIR UniProtKB/TrEMBL
SMART IGc2 UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
  TIR UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
  SSF52200 UniProtKB/TrEMBL
UniProt A0A2R9BS28 ENTREZGENE, UniProtKB/TrEMBL