CD200 (CD200 molecule) - Rat Genome Database

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Gene: CD200 (CD200 molecule) Pan paniscus
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Symbol: CD200
Name: CD200 molecule
RGD ID: 11957619
Description: ENCODES a protein that exhibits protein binding involved in heterotypic cell-cell adhesion (ortholog); INVOLVED IN cell-cell adhesion (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of interleukin-6 production (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); genetic disease (ortholog); FOUND IN neuron projection (ortholog); postsynaptic density (ortholog); presynaptic active zone (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: OX-2 membrane glycoprotein
RGD Orthologs
Human
Mouse
Rat
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22110,334,631 - 110,365,077 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13110,339,408 - 110,369,857 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03109,481,067 - 109,511,261 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13116,404,606 - 116,434,363 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3116,404,728 - 116,434,363 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
CD200
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22110,334,631 - 110,365,077 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13110,339,408 - 110,369,857 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03109,481,067 - 109,511,261 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13116,404,606 - 116,434,363 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3116,404,728 - 116,434,363 (+)Ensemblpanpan1.1panPan2
CD200
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383112,332,573 - 112,362,812 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3112,332,347 - 112,362,812 (+)EnsemblGRCh38hg38GRCh38
GRCh373112,051,420 - 112,081,659 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363113,534,606 - 113,564,349 (+)NCBINCBI36Build 36hg18NCBI36
Celera3110,460,648 - 110,490,361 (+)NCBICelera
Cytogenetic Map3q13.2NCBI
HuRef3109,436,001 - 109,465,715 (+)NCBIHuRef
CHM1_13112,015,971 - 112,045,683 (+)NCBICHM1_1
T2T-CHM13v2.03115,053,635 - 115,083,861 (+)NCBIT2T-CHM13v2.0
Cd200
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391645,202,474 - 45,229,419 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1645,202,498 - 45,229,416 (-)EnsemblGRCm39 Ensembl
GRCm381645,382,111 - 45,409,060 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1645,382,135 - 45,409,053 (-)EnsemblGRCm38mm10GRCm38
MGSCv371645,382,248 - 45,409,166 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361645,301,440 - 45,328,223 (-)NCBIMGSCv36mm8
Celera1645,782,157 - 45,809,002 (-)NCBICelera
Cytogenetic Map16B5NCBI
cM Map1629.53NCBI
Cd200
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81168,916,200 - 68,943,570 (+)NCBIGRCr8
mRatBN7.21155,410,166 - 55,437,527 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1155,410,196 - 55,501,648 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1164,224,976 - 64,251,219 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01156,886,834 - 56,913,080 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01155,959,450 - 55,986,668 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01160,371,617 - 60,398,450 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1160,371,684 - 60,403,196 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01164,474,114 - 64,501,029 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41156,946,504 - 56,974,256 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11157,004,092 - 57,031,845 (+)NCBI
Celera1154,978,287 - 55,004,105 (+)NCBICelera
Cytogenetic Map11q21NCBI
CD200
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13316,872,849 - 16,892,161 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3316,873,048 - 16,890,954 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3316,975,655 - 17,001,572 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03317,116,263 - 17,142,263 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3317,116,357 - 17,136,128 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13316,921,533 - 16,947,516 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03316,968,748 - 16,994,765 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03317,517,917 - 17,543,967 (+)NCBIUU_Cfam_GSD_1.0
Cd200
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602137,487,118 - 137,513,588 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365368,262 - 35,197 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365368,337 - 33,954 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CD200
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13147,465,863 - 147,486,141 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113147,465,858 - 147,485,818 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213157,173,775 - 157,193,532 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CD200
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12268,429,544 - 68,459,711 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2268,426,459 - 68,459,616 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604198,009,245 - 98,038,967 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cd200
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473136,223,673 - 36,251,542 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473136,224,360 - 36,251,656 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000036264   ⟹   ENSPPAP00000013591
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl3116,404,728 - 116,434,363 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000036265   ⟹   ENSPPAP00000013592
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl3116,404,728 - 116,434,363 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000036268   ⟹   ENSPPAP00000013595
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl3116,411,589 - 116,421,392 (+)Ensembl
RefSeq Acc Id: XM_003825090   ⟹   XP_003825138
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22110,335,404 - 110,365,077 (+)NCBI
NHGRI_mPanPan13110,340,184 - 110,369,857 (+)NCBI
Mhudiblu_PPA_v03109,481,594 - 109,511,261 (+)NCBI
PanPan1.13116,404,606 - 116,434,363 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003825091   ⟹   XP_003825139
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22110,335,400 - 110,365,077 (+)NCBI
NHGRI_mPanPan13110,340,182 - 110,369,857 (+)NCBI
Mhudiblu_PPA_v03109,481,475 - 109,511,261 (+)NCBI
PanPan1.13116,404,606 - 116,434,363 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008978794   ⟹   XP_008977042
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22110,335,399 - 110,352,219 (+)NCBI
NHGRI_mPanPan13110,340,181 - 110,356,999 (+)NCBI
Mhudiblu_PPA_v03109,481,587 - 109,498,413 (+)NCBI
PanPan1.13116,404,732 - 116,421,392 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024928278   ⟹   XP_024784046
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22110,335,410 - 110,365,077 (+)NCBI
NHGRI_mPanPan13110,340,190 - 110,369,857 (+)NCBI
Mhudiblu_PPA_v03109,481,475 - 109,511,261 (+)NCBI
PanPan1.13116,404,606 - 116,434,363 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024928283   ⟹   XP_024784051
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22110,335,407 - 110,365,077 (+)NCBI
NHGRI_mPanPan13110,340,187 - 110,369,857 (+)NCBI
Mhudiblu_PPA_v03109,481,475 - 109,511,261 (+)NCBI
PanPan1.13116,404,606 - 116,434,363 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034957076   ⟹   XP_034812967
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22110,335,399 - 110,365,077 (+)NCBI
NHGRI_mPanPan13110,340,311 - 110,369,857 (+)NCBI
Mhudiblu_PPA_v03109,481,588 - 109,511,261 (+)NCBI
RefSeq Acc Id: XM_034957077   ⟹   XP_034812968
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22110,335,403 - 110,365,077 (+)NCBI
NHGRI_mPanPan13110,340,186 - 110,369,857 (+)NCBI
Mhudiblu_PPA_v03109,481,592 - 109,511,261 (+)NCBI
RefSeq Acc Id: XM_034957078   ⟹   XP_034812969
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22110,334,631 - 110,365,077 (+)NCBI
NHGRI_mPanPan13110,339,408 - 110,369,857 (+)NCBI
Mhudiblu_PPA_v03109,481,070 - 109,511,261 (+)NCBI
RefSeq Acc Id: XP_003825139   ⟸   XM_003825091
- Peptide Label: isoform X2
- UniProtKB: A0A2R9A9M0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003825138   ⟸   XM_003825090
- Peptide Label: isoform X5
- UniProtKB: A0A2R9A8J3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008977042   ⟸   XM_008978794
- Peptide Label: isoform X3
- UniProtKB: A0A2R9A8J3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024784046   ⟸   XM_024928278
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_024784051   ⟸   XM_024928283
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_034812969   ⟸   XM_034957078
- Peptide Label: isoform X6
- UniProtKB: A0A2R9A8J3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034812967   ⟸   XM_034957076
- Peptide Label: isoform X1
- UniProtKB: A0A2R9A9M0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034812968   ⟸   XM_034957077
- Peptide Label: isoform X4
- UniProtKB: A0A2R9A8J3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000013595   ⟸   ENSPPAT00000036268
RefSeq Acc Id: ENSPPAP00000013592   ⟸   ENSPPAT00000036265
RefSeq Acc Id: ENSPPAP00000013591   ⟸   ENSPPAT00000036264
Protein Domains
Ig-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000029967 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000036264.1 UniProtKB/TrEMBL
  ENSPPAT00000036265.1 UniProtKB/TrEMBL
  ENSPPAT00000036268.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro CD200 UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_V-set UniProtKB/TrEMBL
  Immunoglobulin UniProtKB/TrEMBL
  OX2G-like UniProtKB/TrEMBL
KEGG Report pps:100972995 UniProtKB/TrEMBL
NCBI Gene CD200 ENTREZGENE
PANTHER OX-2 MEMBRANE GLYCOPROTEIN UniProtKB/TrEMBL
  PTHR46841:SF3 UniProtKB/TrEMBL
Pfam PF00047 UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/TrEMBL
SMART IGv UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
UniProt A0A2R9A8J3 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9A9M0 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9ADU6_PANPA UniProtKB/TrEMBL