IL1R1 (interleukin 1 receptor type 1) - Rat Genome Database

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Gene: IL1R1 (interleukin 1 receptor type 1) Pan paniscus
Analyze
Symbol: IL1R1
Name: interleukin 1 receptor type 1
RGD ID: 11929930
Description: ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); heat acclimation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); aortic dissection (ortholog); Bacterial Keratitis (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: interleukin-1 receptor type 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21226,052,033 - 26,167,680 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A26,054,794 - 26,164,430 (-)NCBINHGRI_mPanPan1
PanPan1.12A103,151,559 - 103,230,005 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A103,193,131 - 103,230,005 (+)Ensemblpanpan1.1panPan2


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
IL1R1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21226,052,033 - 26,167,680 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A26,054,794 - 26,164,430 (-)NCBINHGRI_mPanPan1
PanPan1.12A103,151,559 - 103,230,005 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A103,193,131 - 103,230,005 (+)Ensemblpanpan1.1panPan2
IL1R1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382102,070,390 - 102,179,874 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2102,064,544 - 102,179,874 (+)EnsemblGRCh38hg38GRCh38
GRCh372102,686,850 - 102,796,334 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362102,136,834 - 102,162,766 (+)NCBINCBI36Build 36hg18NCBI36
Build 342102,228,919 - 102,254,852NCBI
Celera296,971,617 - 96,997,550 (+)NCBICelera
Cytogenetic Map2q11.2-q12.1NCBI
HuRef296,534,264 - 96,560,197 (+)NCBIHuRef
CHM1_12102,774,745 - 102,800,675 (+)NCBICHM1_1
T2T-CHM13v2.02102,528,685 - 102,638,160 (+)NCBIT2T-CHM13v2.0
Il1r1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39140,261,651 - 40,355,361 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl140,264,240 - 40,356,417 (+)EnsemblGRCm39 Ensembl
GRCm38140,222,480 - 40,316,201 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl140,225,080 - 40,317,257 (+)EnsemblGRCm38mm10GRCm38
MGSCv37140,281,925 - 40,373,022 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36140,169,626 - 40,260,723 (+)NCBIMGSCv36mm8
Celera140,033,653 - 40,127,353 (+)NCBICelera
Cytogenetic Map1BNCBI
cM Map118.81NCBI
Il1r1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8950,000,558 - 50,076,579 (+)NCBIGRCr8
mRatBN7.2942,504,917 - 42,580,958 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl942,504,735 - 42,579,937 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx951,042,291 - 51,080,451 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0956,165,013 - 56,203,144 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0954,441,033 - 54,478,767 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0946,962,291 - 47,038,139 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl946,962,288 - 47,036,670 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0946,647,422 - 46,723,241 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4939,434,910 - 39,473,552 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1939,434,750 - 39,475,060 (+)NCBI
Celera940,285,956 - 40,323,730 (+)NCBICelera
RH 3.4 Map9396.1RGD
Cytogenetic Map9q22NCBI
Il1r1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554707,685,498 - 7,703,374 (+)NCBIChiLan1.0ChiLan1.0
IL1R1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11040,825,986 - 40,897,898 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1040,827,377 - 40,897,596 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1040,751,798 - 40,823,679 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01041,692,476 - 41,764,370 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1041,692,623 - 41,811,603 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11041,406,689 - 41,478,437 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01041,688,685 - 41,760,634 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01041,880,427 - 41,952,281 (-)NCBIUU_Cfam_GSD_1.0
Il1r1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629290,252,781 - 90,324,177 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936713808,659 - 881,076 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936713808,761 - 881,070 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL1R1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl352,192,915 - 52,288,485 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1352,192,912 - 52,334,734 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2354,729,121 - 54,757,667 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IL1R1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1145,781,486 - 5,852,872 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl145,781,479 - 5,855,942 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041173,465,069 - 173,539,878 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Il1r1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247496,708,522 - 6,739,871 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247496,661,142 - 6,737,988 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003805095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003805096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014343903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024927675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034952058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055107548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063594716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063594717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063594718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063594719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063594720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063594721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063594722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063594723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063594724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000055871   ⟹   ENSPPAP00000033001
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A103,193,131 - 103,230,005 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000055878   ⟹   ENSPPAP00000033008
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A103,207,857 - 103,227,369 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000055880   ⟹   ENSPPAP00000033010
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A103,207,857 - 103,216,310 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000055882   ⟹   ENSPPAP00000033012
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A103,213,007 - 103,226,891 (+)Ensembl
RefSeq Acc Id: XM_003805096   ⟹   XP_003805144
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21226,052,033 - 26,089,156 (-)NCBI
NHGRI_mPanPan12A26,054,794 - 26,091,916 (-)NCBI
PanPan1.12A103,193,131 - 103,230,005 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034952058   ⟹   XP_034807949
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21226,052,033 - 26,090,416 (-)NCBI
NHGRI_mPanPan12A26,054,794 - 26,092,870 (-)NCBI
RefSeq Acc Id: XM_055107548   ⟹   XP_054963523
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21226,052,033 - 26,082,201 (-)NCBI
NHGRI_mPanPan12A26,054,794 - 26,121,984 (-)NCBI
RefSeq Acc Id: XM_063594716   ⟹   XP_063450786
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21226,052,033 - 26,089,137 (-)NCBI
RefSeq Acc Id: XM_063594717   ⟹   XP_063450787
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21226,052,033 - 26,082,201 (-)NCBI
RefSeq Acc Id: XM_063594718   ⟹   XP_063450788
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21226,052,033 - 26,167,680 (-)NCBI
RefSeq Acc Id: XM_063594719   ⟹   XP_063450789
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21226,052,033 - 26,090,416 (-)NCBI
RefSeq Acc Id: XM_063594720   ⟹   XP_063450790
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21226,052,033 - 26,131,023 (-)NCBI
RefSeq Acc Id: XM_063594721   ⟹   XP_063450791
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21226,052,033 - 26,089,137 (-)NCBI
RefSeq Acc Id: XM_063594722   ⟹   XP_063450792
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21226,052,033 - 26,090,296 (-)NCBI
RefSeq Acc Id: XM_063594723   ⟹   XP_063450793
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21226,052,033 - 26,090,217 (-)NCBI
RefSeq Acc Id: XM_063594724   ⟹   XP_063450794
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21226,066,580 - 26,089,137 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_003805144   ⟸   XM_003805096
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BU72 (UniProtKB/TrEMBL),   A0A2R9BTL7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000033008   ⟸   ENSPPAT00000055878
RefSeq Acc Id: ENSPPAP00000033001   ⟸   ENSPPAT00000055871
RefSeq Acc Id: ENSPPAP00000033010   ⟸   ENSPPAT00000055880
RefSeq Acc Id: ENSPPAP00000033012   ⟸   ENSPPAT00000055882
RefSeq Acc Id: XP_054963523   ⟸   XM_055107548
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BU72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034807949   ⟸   XM_034952058
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BU72 (UniProtKB/TrEMBL),   A0A2R9BTL7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063450788   ⟸   XM_063594718
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BU72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063450790   ⟸   XM_063594720
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BU72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063450789   ⟸   XM_063594719
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BU72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063450792   ⟸   XM_063594722
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BU72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063450793   ⟸   XM_063594723
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BU72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063450791   ⟸   XM_063594721
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BU72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063450786   ⟸   XM_063594716
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BU72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063450787   ⟸   XM_063594717
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BU72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063450794   ⟸   XM_063594724
- Peptide Label: isoform X2
Protein Domains
Ig-like   TIR


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000039338 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000055871.1 UniProtKB/TrEMBL
  ENSPPAT00000055878.1 UniProtKB/TrEMBL
  ENSPPAT00000055880.1 UniProtKB/TrEMBL
  ENSPPAT00000055882.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
  3.40.50.10140 UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  IL-1_rcpt_fam UniProtKB/TrEMBL
  IL-1_rcpt_I-typ UniProtKB/TrEMBL
  IL-1_rcpt_I/II-typ UniProtKB/TrEMBL
  IL-1RAcP-like_ig UniProtKB/TrEMBL
  TIR_dom UniProtKB/TrEMBL
  Toll_tir_struct_dom_sf UniProtKB/TrEMBL
KEGG Report pps:100972617 UniProtKB/TrEMBL
NCBI Gene IL1R1 ENTREZGENE
PANTHER INTERLEUKIN-1 RECEPTOR TYPE 1 UniProtKB/TrEMBL
  PTHR11890 UniProtKB/TrEMBL
Pfam Ig_2 UniProtKB/TrEMBL
  Ig_6 UniProtKB/TrEMBL
  TIR UniProtKB/TrEMBL
PRINTS INTRLEUKN1R1 UniProtKB/TrEMBL
  INTRLKN1R12F UniProtKB/TrEMBL
  INTRLKN1R1F UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/TrEMBL
  TIR UniProtKB/TrEMBL
SMART SM00409 UniProtKB/TrEMBL
  TIR UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
  SSF52200 UniProtKB/TrEMBL
UniProt A0A2R9BTL3_PANPA UniProtKB/TrEMBL
  A0A2R9BTL7 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9BU72 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9BX14_PANPA UniProtKB/TrEMBL