CX3CL1 (C-X3-C motif chemokine ligand 1)

Gene: CX3CL1 (C-X3-C motif chemokine ligand 1) Pan paniscus

Analyze

Symbol:

CX3CL1

Name:

C-X3-C motif chemokine ligand 1

RGD ID:

11822114

Description:

ENCODES a protein that exhibits chemokine activity (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); autocrine signaling (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH acute pancreatitis (ortholog); allergic disease (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN cell projection (ortholog); perinuclear region of cytoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

fractalkine

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	66,840,670 - 66,853,297 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	72,761,444 - 72,774,073 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	37,646,447 - 37,659,078 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	56,779,065 - 56,791,760 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	56,779,065 - 56,791,760 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute pancreatitis (ISO)

allergic disease (ISO)

anti-basement membrane glomerulonephritis (ISO)

asthma (ISO)

atopic dermatitis (ISO)

Bardet-Biedl syndrome (ISO)

borna disease (ISO)

chronic fatigue syndrome (ISO)

Chronic Mesangial Proliferative Glomerulonephritis (ISO)

common cold (ISO)

Cor pulmonale (ISO)

Cranial Nerve Injuries (ISO)

cystitis (ISO)

dermatomyositis (ISO)

developmental and epileptic encephalopathy (ISO)

early infantile epileptic encephalopathy (ISO)

Endotoxemia (ISO)

Experimental Arthritis (ISO)

Experimental Autoimmune Encephalomyelitis (ISO)

Experimental Autoimmune Neuritis (ISO)

Experimental Autoimmune Uveitis (ISO)

Experimental Diabetes Mellitus (ISO)

genetic disease (ISO)

glomerulonephritis (ISO)

Hearing Loss (ISO)

hepatopulmonary syndrome (ISO)

Hyperalgesia (ISO)

Intervertebral Disc Displacement (ISO)

ischemia (ISO)

Legionnaires' disease (ISO)

lung disease (ISO)

Microscopic Polyangiitis (ISO)

Myocardial Ischemia (ISO)

myocarditis (ISO)

nephrosis (ISO)

Paramyxoviridae Infections (ISO)

Parkinsonism (ISO)

Periapical Diseases (ISO)

pneumonia (ISO)

polyarteritis nodosa (ISO)

polymyositis (ISO)

portal hypertension (ISO)

prion disease (ISO)

Prostatic Neoplasms (ISO)

pulmonary embolism (ISO)

pulmonary emphysema (ISO)

pulmonary hypertension (ISO)

Reperfusion Injury (ISO)

rheumatoid arthritis (ISO)

rhinitis (ISO)

status epilepticus (ISO)

systemic scleroderma (ISO)

transient cerebral ischemia (ISO)

uveitis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

angiogenesis involved in wound healing (IEA,ISO)

autocrine signaling (ISO)

cell adhesion (IEA)

cell chemotaxis (IEA)

cell-cell adhesion (ISO)

cellular response to tumor necrosis factor (ISO)

chemokine-mediated signaling pathway (IEA)

chemotaxis (IEA,ISO)

cytokine-mediated signaling pathway (IEA,ISO)

eosinophil chemotaxis (IEA)

extrinsic apoptotic signaling pathway in absence of ligand (IEA,ISO)

G protein-coupled receptor signaling pathway (ISO)

immune response (IEA)

inhibitory postsynaptic potential (ISO)

integrin activation (IEA)

leukocyte migration involved in inflammatory response (IEA)

lymphocyte chemotaxis (IEA,ISO)

microglial cell activation (ISO)

microglial cell proliferation (IEA)

negative regulation of apoptotic process (IEA)

negative regulation of apoptotic signaling pathway (IEA)

negative regulation of cell migration (IEA)

negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (IEA,ISO)

negative regulation of glutamate receptor signaling pathway (ISO)

negative regulation of hippocampal neuron apoptotic process (IEA)

negative regulation of interleukin-1 alpha production (ISO)

negative regulation of microglial cell activation (ISO)

negative regulation of tumor necrosis factor production (IEA)

negative regulation of vasoconstriction (ISO)

neuron cellular homeostasis (ISO)

neutrophil chemotaxis (IEA,ISO)

positive chemotaxis (IEA)

positive regulation of actin filament bundle assembly (IEA)

positive regulation of calcium-independent cell-cell adhesion (IEA)

positive regulation of canonical NF-kappaB signal transduction (IEA)

positive regulation of cell adhesion (ISO)

positive regulation of cell migration (ISO)

positive regulation of cell population proliferation (IEA)

positive regulation of I-kappaB phosphorylation (IEA)

positive regulation of inflammatory response (IEA)

positive regulation of macrophage chemotaxis (ISO)

positive regulation of MAPK cascade (IEA)

positive regulation of microglial cell migration (IEA)

positive regulation of neuroblast proliferation (ISO)

positive regulation of neuron projection development (ISO)

positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (IEA)

positive regulation of release of sequestered calcium ion into cytosol (IEA)

positive regulation of smooth muscle cell proliferation (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

positive regulation of transforming growth factor beta1 production (IEA,ISO)

regulation of lipopolysaccharide-mediated signaling pathway (IEA)

response to hypoxia (ISO)

response to ischemia (ISO)

wound healing (IEA,ISO)

Cellular Component

cell body (IEA)

cell projection (ISO)

cell surface (IEA)

extracellular region (IEA)

extracellular space (IEA)

membrane (IEA)

neuron projection (IEA)

neuronal cell body (IEA)

perinuclear region of cytoplasm (ISO)

plasma membrane (IEA)

Molecular Function

chemoattractant activity (IEA)

chemokine activity (IEA,ISO)

CX3C chemokine receptor binding (IEA)

CXCR1 chemokine receptor binding (IEA)

cytokine activity (IEA)

integrin binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

CX3CL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	66,840,670 - 66,853,297 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	72,761,444 - 72,774,073 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	37,646,447 - 37,659,078 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	56,779,065 - 56,791,760 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	56,779,065 - 56,791,760 (+)	Ensembl	panpan1.1		panPan2

CX3CL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	57,372,490 - 57,385,044 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	57,372,477 - 57,385,044 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	57,406,402 - 57,418,956 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	55,963,915 - 55,976,457 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	55,963,914 - 55,976,455	NCBI
Celera	16	41,906,410 - 41,918,956 (+)	NCBI		Celera
Cytogenetic Map	16	q21	NCBI
HuRef	16	43,274,294 - 43,286,836 (+)	NCBI		HuRef
CHM1_1	16	58,814,629 - 58,827,168 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	63,167,607 - 63,180,165 (+)	NCBI		T2T-CHM13v2.0

Cx3cl1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	95,498,808 - 95,509,055 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	95,498,637 - 95,509,055 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	94,772,180 - 94,782,427 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	94,772,009 - 94,782,427 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	97,296,080 - 97,306,327 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	97,661,355 - 97,671,556 (+)	NCBI		MGSCv36	mm8
Celera	8	99,100,414 - 99,110,655 (+)	NCBI		Celera
Cytogenetic Map	8	C5	NCBI
cM Map	8	46.79	NCBI

Cx3cl1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	10,233,326 - 10,244,856 (-)	NCBI		GRCr8
mRatBN7.2	19	10,227,337 - 10,237,826 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	10,227,340 - 10,236,833 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	10,190,578 - 10,200,058 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	10,957,425 - 10,966,906 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	10,244,371 - 10,253,854 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	10,644,267 - 10,654,861 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	10,644,244 - 10,653,800 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	10,638,466 - 10,647,951 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	10,666,940 - 10,676,424 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	10,671,765 - 10,681,250 (-)	NCBI
Celera	19	10,113,300 - 10,122,786 (-)	NCBI		Celera
Cytogenetic Map	19	p13	NCBI

Cx3cl1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955433	15,023,050 - 15,034,711 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955433	15,023,272 - 15,034,650 (+)	NCBI	ChiLan1.0	ChiLan1.0

CX3CL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	59,022,794 - 59,032,095 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	59,022,794 - 59,032,095 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	55,652,232 - 55,661,533 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	59,561,127 - 59,570,437 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	59,559,167 - 59,570,279 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	56,392,704 - 56,402,005 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	57,400,382 - 57,409,687 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	58,293,678 - 58,302,979 (-)	NCBI		UU_Cfam_GSD_1.0

Cx3cl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	50,134,360 - 50,145,250 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936475	9,443,733 - 9,455,062 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936475	9,443,851 - 9,454,715 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CX3CL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	6	19,312,351 - 19,324,439 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	17,304,118 - 17,315,820 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LOC103233058
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	43,310,711 - 43,323,533 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	43,310,753 - 43,323,529 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	32,993,345 - 33,006,077 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cx3cl1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624746	28,677,709 - 28,689,122 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624746	28,677,956 - 28,688,638 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003823745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034940249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000049676 ⟹ ENSPPAP00000026840

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	16	56,779,065 - 56,791,760 (+)	Ensembl

RefSeq Acc Id:

ENSPPAT00000049677 ⟹ ENSPPAP00000026841

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	16	56,779,176 - 56,788,836 (+)	Ensembl

RefSeq Acc Id:

XM_003823745 ⟹ XP_003823793

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	66,840,670 - 66,853,297 (+)	NCBI
NHGRI_mPanPan1	16	72,761,444 - 72,774,073 (+)	NCBI
Mhudiblu_PPA_v0	16	37,646,447 - 37,659,078 (+)	NCBI
PanPan1.1	16	56,779,065 - 56,791,760 (+)	NCBI

Sequence:

show sequence

ATTATAAAAAGCCACAGATCTCTGGCGGCGGCAAGGGGACAGCACTGAGCTCTGCCGCCTGGCT
CTATCCGCCTGCCTGGCCCCCGCCGGGACTCTTGCCCACCCTCAGCCATGGCTCCGATATCTCT
CTCGTGGCTGCTCCGCTTGGCCACCTTCTGCCATCTGACCGTCCTGCTGGCTGGACAGCACCAC
GGTGTGACGAAATGCAACATCACGTGCAGCAAGATGACATCAAAGATACCTGTAGCTTTGCTCA
TCCACTATCAACAGAACCAGGCATCATGCGGCAAACGCGCAATCATCTTGGAGACGAGACAGCA
CAGGCTGTTCTGTGCCGACCCGAAGGAGCAATGGGTCAAGGACGCGATGCAGCATCTGGACCGC
CAGGCTGCTGCCCTAACTCGAAATGGCGGCACCTTCGAGAAGCAGATCGGCGAGGTGAAGCCCA
GGACCACCCCTGCCGCCGGGGGAATGGACGAGTCTGTGGTCCTGGAGCCCGAAGCCACAGGCGA
AAGCAGTAGCCTGGAGCCGACTCCTTCTTCCCAGGAAGCACAGAGGGCCCTGGGGACCTCCCCA
GAGCTGCTGACGGGCGTGACTGGTTCCTCAGGGACCGGGCTCCCCACGACGCCAAAGGCTCAGG
ATGGAGGGCCTGTGGGCACGGAGCTTTTCCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGCA
GAGTTCTGCTCCCCACCAACCTGGGCCCGGCCTCTGGGCTGAGGCAAAGACCTCTGAGGCCCGG
TCCACCCAGGACCCCTCCACCCAGGCCTCCACTGCGTCCTCCCCAGCCCCAGAGGAGAACGCTC
CGTCTGAAGGCCAGCGTGTGTGGGGTCAGGGACAGAGCCCCAGGCCAGAGAACTCTCTGGAGCG
GGAGGAGATGGGTCCCGTGCCAGCGCACACGGATGCCTTCCAGGACTGGGGGCCTGGCAGCATG
GCCCACGTCTCTGTGGTCCCTGTCTCCTCAGAAGGGACCCCCAGCAGGGAGCCAGTGGCTTCAG
GCAGCTGGACCCCTAAGGCTGAGGAACCCATCCATGCCACCATGGACCCCCAGAGGCTGGGCGT
CCTTATCACTCCTGTCCCTGACGCCCAGGCTGCCACCCGGAGGCAGGCGGTGGGGCTGCTGGCC
TTCCTTGGCCTCCTCTTCTGCCTGGGGGTGGCCATGTTCACCTACCAGAGCCTCCAGGGCTGCC
CTCGAAAGATGGCGGGAGAGATGGTGGAGGGCCTTCGCTACATCCCCCGGAGCTGTGGTAGTAA
TTCATATGTCCTGGTGCCCGTGTGAACTCCTCTGGCCTGTGTCTAGTTGTTTGATTCAGACAGC
TGCCTGGGATCCCTCATCCTCATACCCACCCCCACCCAAGGGCCTGGCCTGAGCTGGGATAATT
GGAGGGGGGAGGTGGGATCCTCCAGGTGCATAAGCTCCAAGCTCCCAGGCACTCCCCAGGAGGC
CAGCCTTGACCATTCTCCACCTGCCAGGGACAGAGGGGGTGGCCTCCCAACTCACCCCAGCCCC
AAAACTCTCCTCTGCTGCTGGCTGGTTAGAGGTTCCCTTTGATGCCATCCCAGCCCCAATGAAC
AATTATTTATTAAATGCCCAGCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCC
ATCTCACACATGAGCATCAGGCCAGGCCCTCTGCCCACTCCCTGCAACCTGATTGTGTCTCTTG
GTCCTGCTGCAGTTGCCAGTCACCCCGGCCACCTGCGGTGCTATCTCCCCCAGCCCCATCCTCT
GTACAGAGCCCACGCCCCCACTGGTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCC
TGGCACTGCTTCCAGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTAT
CTGGTGACTTTCCTCTTTGGTCTACACTGTGCTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTC
CACCATCAAGCCACCAACATACTCCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTC
CCCCTGACATCACTCATTGACCTGAGGCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCC
TTATCAGCAGAGCACCTTAGACAGTCCCTGCCAATGGATTAACTTGTCTTTGGACCCTGAGGCC
CAGAGGGCCTGCAAGGGAGTGAGTTGATAGCACAGATCCTGCCCTGTGGGCCTCCAAATGGAAG
TGGGTAGAGCAGAGACCATCCCTGAAGGCCCCGCCCAGGCTTAGTCACTGAGACAGCCCGGGCT
CTGCCTCCCATCACCCCCTAAGAGGGAGGAGGGAGGGCTCCAGACACATGTCCAAGAAGCCCAG
GAAAGGCTCCAGGAGCAGCCACATTCCTGACGCTTCTTCAGAGACTCCTGCAGGCAGCCAGGCC
ACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGTTCCCCTCCC
ACCTCTCTCACTCCTTGAAAACACTGTTCTCTGCCCTCCAAGACCTTCTCCTTCATCTTTGTCC
CCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCATGAGCCCCCTGTTTGTTTCTGAAA
GGGACACTACCCGGGAAGGGGGCTGGGACATGGGAAAGGGGAAGTTGTAGGTATAAAGTCAGGG
GTTCCCTTTTTTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
CCCTCAGGGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACC
TGAGGGGCCTCTTATGGGCTGGGTTCTACCCAGGTGCTAGGAACACTCCTTCACAGGTGGGTGC
TTGGAGGAAGGAAACCCAGCTCTGGTCCATAGAGAGCAAGACACTGTGCTGCCCTGCCCACCTG
GCCTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTGGCTCAGGT
GGGGTCACTCTGGCAGCTCAGAGAGGGTGGGAGTGGGTCCAATGCACTTTGTTCTGGCTCTTCC
AGGCTGGGAGAGCCTTCCAGGGGTGGGACACCCTGTGATGGGGCCCTGCCTCCTTTGTGAGGAA
GCTGCTGGGGCCAGTTGGTCCCCCTTCCATGGACTTTGTTAGTTTCTCCAAGCAGGACATGGAC
AAGGATGATCTAGGAAGACTTTGGAAAGAGTAGGAAGACTTTGGAAAGACTTTTCCAACCCTCA
TCACCAATGTCTGTGCCATTTTGTATTTTACTAATAAAATTTAAAAGTCTTGTGAATCAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003823793	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000026840.1
	ENSPPAP00000026841.1

RefSeq Acc Id:

XP_003823793 ⟸ XM_003823745

- UniProtKB:

A0A2R9BJ74 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAPISLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGKRAII
LETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGGMDESVVLE
PEATGESSSLEPTPSSQEAQRALGTSPELLTGVTGSSGTGLPTTPKAQDGGPVGTELFRVPPVS
TAATWQSSAPHQPGPGLWAEAKTSEARSTQDPSTQASTASSPAPEENAPSEGQRVWGQGQSPRP
ENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSREPVASGSWTPKAEEPIHATMD
PQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMFTYQSLQGCPRKMAGEMVEGLRYIP
RSCGSNSYVLVPV

hide sequence

RefSeq Acc Id:

ENSPPAP00000026841 ⟸ ENSPPAT00000049677

RefSeq Acc Id:

ENSPPAP00000026840 ⟸ ENSPPAT00000049676

Protein Domains

Chemokine interleukin-8-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000036505	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000049676.1	UniProtKB/TrEMBL
	ENSPPAT00000049677.1	UniProtKB/TrEMBL
Gene3D-CATH	2.40.50.40	UniProtKB/TrEMBL
InterPro	Chemokine_b/g/d	UniProtKB/TrEMBL
	Chemokine_CX3C	UniProtKB/TrEMBL
	Chemokine_IL8-like_dom	UniProtKB/TrEMBL
	Interleukin_8-like_sf	UniProtKB/TrEMBL
KEGG Report	pps:100979411	UniProtKB/TrEMBL
NCBI Gene	CX3CL1	ENTREZGENE
PANTHER	PTHR12015	UniProtKB/TrEMBL
	PTHR12015:SF92	UniProtKB/TrEMBL
Pfam	IL8	UniProtKB/TrEMBL
PRINTS	FRACTALKINE	UniProtKB/TrEMBL
SMART	SCY	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54117	UniProtKB/TrEMBL
UniProt	A0A2R9BEV8_PANPA	UniProtKB/TrEMBL
	A0A2R9BJ74	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD