PROC (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 13 | 48,216,407 - 48,225,782 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2B | 48,225,133 - 48,240,711 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2B | 32,846,899 - 32,859,060 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2B | 128,083,794 - 128,094,625 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2B | 128,083,794 - 128,094,625 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PROC (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 2 | 127,418,427 - 127,429,242 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 127,418,427 - 127,429,242 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 128,176,003 - 128,186,818 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 127,892,487 - 127,903,288 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 2 | 127,892,245 - 127,903,048 | NCBI | | | | | Celera | 2 | 121,487,217 - 121,498,043 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | q14.3 | NCBI | | | | | HuRef | 2 | 120,483,060 - 120,493,885 (+) | NCBI | | HuRef | | | CHM1_1 | 2 | 128,180,576 - 128,191,401 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 127,853,697 - 127,864,511 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Proc (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 18 | 32,256,179 - 32,272,623 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 18 | 32,256,179 - 32,272,623 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 18 | 32,123,126 - 32,139,570 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 18 | 32,123,126 - 32,139,570 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 18 | 32,282,780 - 32,299,224 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 18 | 32,266,137 - 32,278,949 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 18 | 32,604,740 - 32,621,169 (-) | NCBI | | Celera | | | Cytogenetic Map | 18 | B1 | NCBI | | | | | cM Map | 18 | 17.94 | NCBI | | | | |
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Proc (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 18 | 24,038,596 - 24,049,061 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 18 | 23,764,367 - 23,774,816 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 18 | 23,764,368 - 23,775,133 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 18 | 23,892,461 - 23,902,808 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 18 | 24,648,935 - 24,660,144 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 18 | 23,987,447 - 23,997,792 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 18 | 24,918,402 - 24,928,822 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 18 | 24,918,398 - 24,929,091 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 18 | 24,633,206 - 24,643,623 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 18 | 24,563,368 - 24,573,715 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 18 | 24,590,014 - 24,600,361 (-) | NCBI | | | | | Celera | 18 | 23,516,361 - 23,526,709 (-) | NCBI | | Celera | | | Cytogenetic Map | 18 | p12 | NCBI | | | | |
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Proc (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955459 | 3,094,120 - 3,104,135 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955459 | 3,097,229 - 3,105,566 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PROC (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 19 | 23,173,626 - 23,183,634 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 19 | 23,173,635 - 23,183,563 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 19 | 23,421,177 - 23,431,114 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 19 | 24,500,225 - 24,510,240 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 19 | 24,500,234 - 24,510,166 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 19 | 23,203,858 - 23,213,794 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 19 | 23,398,248 - 23,408,180 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 19 | 24,530,694 - 24,540,633 (-) | NCBI | | UU_Cfam_GSD_1.0 | | | Dog Cytomap | 19 | q21-q22 | NCBI | | | | |
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Proc (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405303 | 97,765,920 - 97,775,831 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936469 | 43,841,989 - 43,850,304 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936469 | 43,841,989 - 43,850,322 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PROC (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 15 | 25,043,545 - 25,056,595 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 15 | 25,043,543 - 25,054,310 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 15 | 28,724,914 - 28,735,638 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PROC (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 10 | 2,789,227 - 2,799,783 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 10 | 2,789,277 - 2,799,531 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666061 | 19,959,230 - 19,968,598 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Proc (Heterocephalus glaber - naked mole-rat) |
|