MMP1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 9 | 103,583,360 - 103,592,135 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 104,671,553 - 104,680,228 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 97,730,545 - 97,739,190 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 101,221,393 - 101,230,104 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 101,221,393 - 101,230,104 (-) | Ensembl | panpan1.1 | | panPan2 | |
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MMP1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 102,789,919 - 102,798,160 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 102,789,401 - 102,798,160 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 102,660,650 - 102,668,891 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 102,165,861 - 102,174,104 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 11 | 102,165,860 - 102,174,104 | NCBI | | | | | Celera | 11 | 99,822,300 - 99,830,624 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q22.2 | NCBI | | | | | HuRef | 11 | 98,588,616 - 98,596,940 (-) | NCBI | | HuRef | | | CHM1_1 | 11 | 102,543,487 - 102,551,813 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 102,793,739 - 102,801,980 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Mmp1a (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 7,464,141 - 7,476,870 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 7,464,141 - 7,476,857 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 7,464,141 - 7,476,869 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 7,464,141 - 7,476,869 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 7,464,141 - 7,476,869 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 7,464,141 - 7,476,856 (+) | NCBI | | MGSCv36 | mm8 | | Cytogenetic Map | 9 | A1 | NCBI | | | | | cM Map | 9 | 2.46 | NCBI | | | | |
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Mmp1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 12,943,453 - 12,963,966 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 4,658,588 - 4,679,099 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 4,658,588 - 4,679,097 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 8,618,256 - 8,638,758 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 6,916,028 - 6,936,530 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 4,918,249 - 4,938,764 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 5,703,206 - 5,723,593 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 5,703,206 - 5,723,591 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 5,706,054 - 5,726,441 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 4,333,773 - 4,354,284 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 8 | 4,333,814 - 4,353,725 (+) | NCBI | | | | | Celera | 8 | 6,218,410 - 6,238,921 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | q11 | NCBI | | | | |
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MMP1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 5 | 28,978,385 - 28,986,644 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 5 | 28,978,473 - 28,986,648 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 5 | 28,926,897 - 28,935,120 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 5 | 29,029,643 - 29,038,059 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 5 | 29,029,685 - 29,075,950 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 5 | 29,064,653 - 29,073,076 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 5 | 28,944,064 - 28,952,288 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 5 | 29,119,065 - 29,127,510 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Mmp1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404947 | 86,361,179 - 86,368,526 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936551 | 5,168,044 - 5,174,857 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936551 | 5,167,909 - 5,175,149 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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MMP1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 9 | 33,411,065 - 33,420,076 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 33,411,738 - 33,420,205 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 37,358,454 - 37,367,107 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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MMP1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 1 | 94,167,507 - 94,177,357 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 94,167,219 - 94,176,767 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666043 | 31,701,312 - 31,710,000 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Mmp1 (Heterocephalus glaber - naked mole-rat) |
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