KCNQ5 (potassium voltage-gated channel subfamily Q member 5) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: KCNQ5 (potassium voltage-gated channel subfamily Q member 5) Pan paniscus
Analyze
Symbol: KCNQ5
Name: potassium voltage-gated channel subfamily Q member 5
RGD ID: 11723174
Description: ENCODES a protein that exhibits voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 46 (ortholog); congenital diaphragmatic hernia (ortholog); Developmental Disabilities (ortholog); FOUND IN calyx of Held (ortholog); presynaptic membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: potassium voltage-gated channel subfamily KQT member 5; potassium voltage-gated channel, KQT-like subfamily, member 5
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2592,601,093 - 93,177,834 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1690,526,540 - 91,103,615 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0670,448,161 - 71,025,173 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1673,741,208 - 74,315,757 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl673,742,191 - 74,312,344 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
KCNQ5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2592,601,093 - 93,177,834 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1690,526,540 - 91,103,615 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0670,448,161 - 71,025,173 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1673,741,208 - 74,315,757 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl673,742,191 - 74,312,344 (+)Ensemblpanpan1.1panPan2
KCNQ5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38672,622,064 - 73,198,853 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl672,621,792 - 73,198,853 (+)EnsemblGRCh38hg38GRCh38
GRCh37673,331,792 - 73,908,576 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36673,388,556 - 73,962,301 (+)NCBINCBI36Build 36hg18NCBI36
Build 34673,388,555 - 73,962,301NCBI
Celera673,724,971 - 74,301,723 (+)NCBICelera
Cytogenetic Map6q13NCBI
HuRef670,530,024 - 71,107,055 (+)NCBIHuRef
CHM1_1673,498,230 - 74,075,278 (+)NCBICHM1_1
T2T-CHM13v2.0673,798,716 - 74,375,478 (+)NCBIT2T-CHM13v2.0
Kcnq5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39121,468,623 - 22,032,874 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl121,468,627 - 22,032,166 (-)EnsemblGRCm39 Ensembl
GRCm38121,398,399 - 21,962,650 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl121,398,403 - 21,961,942 (-)EnsemblGRCm38mm10GRCm38
MGSCv37121,388,484 - 21,952,023 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36121,387,314 - 21,946,732 (-)NCBIMGSCv36mm8
Celera121,280,293 - 21,849,214 (-)NCBICelera
Cytogenetic Map1A4NCBI
cM Map16.67NCBI
Kcnq5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8931,326,595 - 31,892,399 (-)NCBIGRCr8
mRatBN7.2923,830,185 - 24,395,984 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl923,833,087 - 24,394,704 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx932,326,367 - 32,887,878 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0937,447,044 - 38,008,537 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0935,762,286 - 36,323,828 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0927,565,869 - 28,141,114 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl927,562,959 - 27,761,733 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0926,413,162 - 26,986,457 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4920,181,402 - 20,767,644 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1920,293,226 - 20,293,677 (-)NCBI
Celera921,408,169 - 21,967,095 (-)NCBICelera
Cytogenetic Map9q13NCBI
Kcnq5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554887,406,635 - 7,927,532 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554887,406,633 - 7,928,526 (+)NCBIChiLan1.0ChiLan1.0
KCNQ5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11234,872,514 - 35,364,794 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1234,872,581 - 35,362,349 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1234,737,803 - 35,233,429 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01235,413,242 - 35,916,493 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1235,413,242 - 35,913,762 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11234,948,630 - 35,457,677 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01234,986,659 - 35,479,229 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01235,098,552 - 35,603,898 (+)NCBIUU_Cfam_GSD_1.0
Kcnq5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494670,125,573 - 70,658,239 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366184,283,349 - 4,812,036 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366184,283,240 - 4,815,571 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCNQ5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl152,435,235 - 52,939,823 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1152,435,332 - 52,939,705 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2158,773,511 - 59,277,120 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KCNQ5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1171,932,962 - 2,495,926 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl171,930,803 - 2,128,570 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660587,855,745 - 8,424,719 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kcnq5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248196,889,658 - 7,365,537 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248196,886,328 - 7,365,537 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000059397   ⟹   ENSPPAP00000036505
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl673,742,191 - 74,312,344 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000059400   ⟹   ENSPPAP00000036508
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl673,742,191 - 74,312,344 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000059408   ⟹   ENSPPAP00000036516
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl673,742,191 - 74,312,344 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000059410   ⟹   ENSPPAP00000036518
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl673,742,191 - 74,312,344 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000059422   ⟹   ENSPPAP00000036530
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl674,113,409 - 74,312,344 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000059428   ⟹   ENSPPAP00000036536
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl674,113,409 - 74,312,344 (+)Ensembl
RefSeq Acc Id: XM_003809536   ⟹   XP_003809584
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2592,601,095 - 93,177,834 (+)NCBI
NHGRI_mPanPan1690,526,542 - 91,103,615 (+)NCBI
Mhudiblu_PPA_v0670,448,163 - 71,025,173 (+)NCBI
PanPan1.1673,741,208 - 74,315,757 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034962369   ⟹   XP_034818260
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2592,601,093 - 93,177,834 (+)NCBI
NHGRI_mPanPan1690,526,540 - 91,103,615 (+)NCBI
Mhudiblu_PPA_v0670,448,161 - 71,025,173 (+)NCBI
RefSeq Acc Id: XP_003809584   ⟸   XM_003809536
- Peptide Label: isoform X2
- UniProtKB: A0A2R9C6I5 (UniProtKB/TrEMBL),   A0A2R9C3J4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034818260   ⟸   XM_034962369
- Peptide Label: isoform X1
- UniProtKB: A0A2R9C3J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000036505   ⟸   ENSPPAT00000059397
RefSeq Acc Id: ENSPPAP00000036516   ⟸   ENSPPAT00000059408
RefSeq Acc Id: ENSPPAP00000036508   ⟸   ENSPPAT00000059400
RefSeq Acc Id: ENSPPAP00000036518   ⟸   ENSPPAT00000059410
RefSeq Acc Id: ENSPPAP00000036536   ⟸   ENSPPAT00000059428
RefSeq Acc Id: ENSPPAP00000036530   ⟸   ENSPPAT00000059422

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000040956 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000059397.1 UniProtKB/TrEMBL
  ENSPPAT00000059400.1 UniProtKB/TrEMBL
  ENSPPAT00000059408.1 UniProtKB/TrEMBL
  ENSPPAT00000059410.1 UniProtKB/TrEMBL
  ENSPPAT00000059422.1 UniProtKB/TrEMBL
  ENSPPAT00000059428.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.70 UniProtKB/TrEMBL
  1.20.120.350 UniProtKB/TrEMBL
  6.10.140.1910 UniProtKB/TrEMBL
InterPro Ion_trans_dom UniProtKB/TrEMBL
  K_chnl_volt-dep_KCNQ UniProtKB/TrEMBL
  K_chnl_volt-dep_KCNQ_C UniProtKB/TrEMBL
  Volt_channel_dom_sf UniProtKB/TrEMBL
KEGG Report pps:100982599 UniProtKB/TrEMBL
NCBI Gene KCNQ5 ENTREZGENE
PANTHER POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 4 UniProtKB/TrEMBL
  POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 5 UniProtKB/TrEMBL
Pfam Ion_trans UniProtKB/TrEMBL
  KCNQ_channel UniProtKB/TrEMBL
PRINTS KCHANNEL UniProtKB/TrEMBL
  KCNQCHANNEL UniProtKB/TrEMBL
Superfamily-SCOP Voltage-gated potassium channels UniProtKB/TrEMBL
UniProt A0A2R9C3G8_PANPA UniProtKB/TrEMBL
  A0A2R9C3I6_PANPA UniProtKB/TrEMBL
  A0A2R9C3J4 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9C3M5_PANPA UniProtKB/TrEMBL
  A0A2R9C6I5 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9C6J5_PANPA UniProtKB/TrEMBL