LOC108348987 (uncharacterized LOC108348987) - Rat Genome Database

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Gene: LOC108348987 (uncharacterized LOC108348987) Rattus norvegicus
Analyze
Symbol: LOC108348987
Name: uncharacterized LOC108348987
RGD ID: 11489246
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81959,912,255 - 59,921,705 (-)NCBIGRCr8
mRatBN7.21943,003,404 - 43,012,511 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.01947,344,033 - 47,347,002 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Celera1942,303,708 - 42,319,942 (-)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC108348987
42 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
9589102Slep13Serum leptin concentration QTL 134.630.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)1956937445569374Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19218792746708701Rat
8694186Bw152Body weight QTL 1523.340.001body mass (VT:0001259)body weight gain (CMO:0000420)1956937445569374Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)191560502346559041Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191082797043544039Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)192932249057337602Rat
1358200Insglur2Insulin/glucose ratio QTL 24.1blood glucose amount (VT:0000188)serum insulin level (CMO:0000358)193383821455283146Rat
1358200Insglur2Insulin/glucose ratio QTL 24.1blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)193383821455283146Rat


Expression


Sequence


RefSeq Acc Id: XR_001842404
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81959,912,255 - 59,921,705 (-)NCBI
mRatBN7.21943,003,404 - 43,012,511 (-)NCBI
Rnor_6.01947,344,033 - 47,347,002 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005496834
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81959,912,255 - 59,921,705 (-)NCBI
mRatBN7.21943,003,404 - 43,012,511 (-)NCBI
RefSeq Acc Id: XR_010060243
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81959,912,255 - 59,921,705 (-)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-5585 BioCyc
NCBI Gene LOC108348987 ENTREZGENE
PhenoGen LOC108348987 PhenoGen
RNAcentral URS0000CCE92B RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-02 LOC108348987  uncharacterized LOC108348987      Symbol and Name status set to provisional 70820 PROVISIONAL