LOC108350222 (uncharacterized LOC108350222) - Rat Genome Database

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Gene: LOC108350222 (uncharacterized LOC108350222) Rattus norvegicus
Analyze
Symbol: LOC108350222
Name: uncharacterized LOC108350222
RGD ID: 11458063
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8225,834,500 - 25,838,188 (-)NCBIGRCr8
mRatBN7.2224,099,453 - 24,103,141 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0222,459,266 - 22,462,659 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Celera220,183,412 - 20,186,805 (-)NCBICelera
Cytogenetic Map2q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC108350222
15 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631682Bp115Blood pressure QTL 1154.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2137410502Rat
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2141244106Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)25873687102844969Rat
1600379Mcs18Mammary carcinoma susceptibility QTL 182.6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2788777242804738Rat
738012Anxrr3Anxiety related response QTL 33.8exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)2902351954023519Rat
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21159110056591100Rat
1578664Bmd9Bone mineral QTL density 95femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)21185206249003364Rat
731184Mamtr4Mammary tumor resistance QTL 40.0003mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)21649174061491740Rat
1357990Ael1Aortic elastin QTL 13.10.00091aorta elastin amount (VT:0003905)aortic elastin21907682564076825Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22030467265304672Rat
2300168Bmd47Bone mineral density QTL 476.60.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)22066244865662448Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XR_001836997
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8225,834,500 - 25,838,188 (-)NCBI
mRatBN7.2224,099,453 - 24,103,141 (-)NCBI
Rnor_6.0222,459,266 - 22,462,659 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-54858 BioCyc
NCBI Gene LOC108350222 ENTREZGENE
PhenoGen LOC108350222 PhenoGen
RNAcentral URS0000CCE175 RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-02 LOC108350222  uncharacterized LOC108350222      Symbol and Name status set to provisional 70820 PROVISIONAL