Trnaa-cgc4 (transfer RNA alanine (anticodon CGC) 4) - Rat Genome Database

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Gene: Trnaa-cgc4 (transfer RNA alanine (anticodon CGC) 4) Rattus norvegicus
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Symbol: Trnaa-cgc4
Name: transfer RNA alanine (anticodon CGC) 4
RGD ID: 11372193
Description: This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
Type: trna
RefSeq Status: MODEL
Previously known as: transfer RNA alanine (anticodon CGC); Trnaa-cgc
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X15,343,143 - 15,343,220 (-)NCBIGRCr8
mRatBN7.2X12,670,630 - 12,670,707 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X14,227,052 - 14,227,123 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
CeleraX13,280,475 - 13,280,546 (-)NCBICelera
Cytogenetic MapXq12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X143491017Rat
634325Bw13Body weight QTL 130body mass (VT:0001259)body weight (CMO:0000012)X144797220991088Rat
70165Bp64Blood pressure QTL 645.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X144812931706553Rat
631204Gluco15Glucose level QTL 150.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)X162371522646544Rat
1298071Edpm12Estrogen-dependent pituitary mass QTL 123.2pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)X292789847927898Rat
10755455Coatc13Coat color QTL 130coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7440600049406000Rat
631666Iddm5Insulin dependent diabetes mellitus QTL 5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X449454949494549Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-3027 BioCyc
NCBI Gene Trnaa-cgc ENTREZGENE
PhenoGen Trnaa-cgc4 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-02 Trnaa-cgc4  transfer RNA alanine (anticodon CGC) 4      Symbol and Name status set to provisional 70820 PROVISIONAL