Or6c203b (olfactory receptor family 6 subfamily C member 203B) - Rat Genome Database

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Gene: Or6c203b (olfactory receptor family 6 subfamily C member 203B) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Or6c203b
Name: olfactory receptor family 6 subfamily C member 203B
RGD ID: 11356498
Description: Predicted to enable olfactory receptor activity.
Type: protein-coding (Ensembl: pseudogene)
RefSeq Status: VALIDATED
Previously known as: LOC108348038; olfactory receptor 6C2-like; olfactory receptor 883; olfactory receptor family 6 subfamily C member 203A; Olr883; Or6c203a
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr872,332,633 - 2,333,568 (-)NCBIGRCr8
mRatBN7.271,722,839 - 1,723,774 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl71,722,839 - 1,723,774 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx74,534,501 - 4,535,436 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0763,768 - 64,703 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.076,693,916 - 6,694,851 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.075,655,645 - 5,658,405 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl75,655,645 - 5,658,405 (+)EnsemblRnor6.0rn6Rnor6.0
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.

Genomics


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2298550Neuinf6Neuroinflammation QTL 63.3nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)7127829089Rat
7411566Bw136Body weight QTL 13610.40.001body mass (VT:0001259)body weight gain (CMO:0000420)7131962314Rat
9590142Scort5Serum corticosterone level QTL 524.40.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)7131962314Rat
724560Plsm3Polydactyly-luxate syndrome (PLS) morphotypes QTL 30.0003tibia length (VT:0004357)tibia length (CMO:0000450)7134000259Rat
2317047Wbc4White blood cell count QTL 40.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)7135342956Rat
61410Bw19Body weight QTL 196.20.001body mass (VT:0001259)body weight (CMO:0000012)7144782185Rat
631503Bp102Blood pressure QTL 1021.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7144822433Rat
1300176Hrtrt10Heart rate QTL 103.19heart pumping trait (VT:2000009)heart rate (CMO:0000002)766427026029351Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000043749   ⟹   ENSRNOP00000041303
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl75,655,645 - 5,658,405 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000111983
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl71,722,839 - 1,723,774 (-)Ensembl
RefSeq Acc Id: NM_001395585   ⟹   NP_001382514
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr872,332,633 - 2,333,568 (-)NCBI
mRatBN7.271,722,839 - 1,723,774 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001382514 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: ENSRNOP00000041303   ⟸   ENSRNOT00000043749
RefSeq Acc Id: NP_001382514   ⟸   NM_001395585

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZQX7-F1-model_v2 AlphaFold D3ZQX7 1-311 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:11356498 AgrOrtholog
BioCyc Gene G2FUF-35308 BioCyc
Ensembl Genes ENSRNOG00000050851 Ensembl
  ENSRNOG00000062664 Ensembl
NCBI Gene LOC108348038 ENTREZGENE
PhenoGen Or6c203b PhenoGen
RatGTEx ENSRNOG00000050851 RatGTEx
  ENSRNOG00000062664 RatGTEx


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-18 Or6c203b  olfactory receptor family 6 subfamily C member 203B  Or6c203a  olfactory receptor family 6 subfamily C member 203A  Name and Symbol changed 629549 APPROVED
2023-09-18 Or6c203a  olfactory receptor family 6 subfamily C member 203A  Or6c203b  olfactory receptor family 6 subfamily C member 203B  Name and Symbol changed 629549 APPROVED
2022-08-16 Or6c203b  olfactory receptor family 6 subfamily C member 203B  Olr883  olfactory receptor 883  Symbol and Name Changed 1299863 APPROVED
2021-07-20 Olr883  olfactory receptor 883  LOC108348038  olfactory receptor 6C2-like  Name and Symbol changed 629549 APPROVED
2016-08-02 LOC108348038  olfactory receptor 6C2-like      Symbol and Name status set to provisional 70820 PROVISIONAL