Camk2a (calcium/calmodulin-dependent protein kinase II alpha) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Camk2a (calcium/calmodulin-dependent protein kinase II alpha) Mus musculus
Analyze
Symbol: Camk2a
Name: calcium/calmodulin-dependent protein kinase II alpha
RGD ID: 10284
MGI Page MGI
Description: Enables calmodulin binding activity; glutamate receptor binding activity; and protein serine/threonine kinase activity. Involved in regulation of endocannabinoid signaling pathway and regulation of synaptic vesicle docking. Acts upstream of or within several processes, including G1/S transition of mitotic cell cycle; modulation of chemical synaptic transmission; and positive regulation of cardiac muscle cell apoptotic process. Located in mitochondrion and postsynaptic density. Is active in Schaffer collateral - CA1 synapse. Is expressed in several structures, including alimentary system; early embryo; eye; genitourinary system; and nervous system. Used to study autism spectrum disorder and bipolar disorder. Human ortholog(s) of this gene implicated in autosomal dominant intellectual developmental disorder 53 and autosomal recessive intellectual developmental disorder 63. Orthologous to human CAMK2A (calcium/calmodulin dependent protein kinase II alpha).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: alpha-CaMKII; calcium/calmodulin-dependent protein kinase type II subunit alpha; caM kinase II subunit alpha; CaMK II; caMK-II subunit alpha; CaMKII; mKIAA0968; R74975
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391861,058,704 - 61,121,224 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1861,058,690 - 61,121,224 (+)EnsemblGRCm39 Ensembl
GRCm381860,925,307 - 60,988,152 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1860,925,618 - 60,988,152 (+)EnsemblGRCm38mm10GRCm38
MGSCv371861,085,286 - 61,147,806 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361861,051,001 - 61,113,513 (+)NCBIMGSCv36mm8
Celera1862,212,530 - 62,274,768 (+)NCBICelera
Cytogenetic Map18E1NCBI
cM Map1834.41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(R)-lipoic acid  (EXP)
(S)-nicotine  (EXP)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
2-(3,4-dimethoxyphenyl)-5-\{[2-(3,4-dimethoxyphenyl)ethyl](methyl)amino\}-2-(propan-2-yl)pentanenitrile  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-sulfonyldiphenol  (EXP)
6-propyl-2-thiouracil  (ISO)
7-chlorokynurenic acid  (ISO)
acrylamide  (EXP,ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
amiodarone  (ISO)
ammonium chloride  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (EXP)
arsenous acid  (EXP)
azamethiphos  (ISO)
Bay-K-8644  (EXP)
benzo[a]pyrene  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (EXP,ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
cannabidiol  (ISO)
cantharidin  (EXP)
capsaicin  (ISO)
chlorpyrifos  (EXP,ISO)
cisplatin  (ISO)
clozapine  (EXP,ISO)
cobalt dichloride  (ISO)
cocaine  (EXP,ISO)
copper atom  (ISO)
copper(0)  (ISO)
Cuprizon  (ISO)
curcumin  (EXP,ISO)
cyclosporin A  (ISO)
cyfluthrin  (ISO)
cyhalothrin  (ISO)
cypermethrin  (ISO)
decabromodiphenyl ether  (EXP,ISO)
diarsenic trioxide  (EXP)
dieldrin  (ISO)
diethyl malate  (EXP)
diethylstilbestrol  (EXP)
dizocilpine maleate  (ISO)
dopamine  (ISO)
ethanol  (EXP,ISO)
ethylene glycol bis(2-aminoethyl)tetraacetic acid  (ISO)
flurotyl  (ISO)
FPL 64176  (ISO)
Glutathione ethyl ester  (EXP)
glyphosate  (ISO)
haloperidol  (ISO)
heptachlor  (ISO)
ibuprofen  (ISO)
ionomycin  (ISO)
ivermectin  (ISO)
kainic acid  (EXP)
KN-93  (EXP,ISO)
lead diacetate  (EXP,ISO)
lead(0)  (ISO)
lipoic acid  (EXP)
losartan  (EXP)
malathion  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
memantine  (ISO)
methapyrilene  (ISO)
methimazole  (ISO)
microcystin-LR  (EXP)
monosodium L-glutamate  (ISO)
morphine  (EXP)
N-methyl-6-chloro-1-(3-methylphenyl)-2,3,4,5-tetrahydro-3-benzazepine-7,8-diol  (ISO)
N-nitrosodiethylamine  (EXP)
nicardipine  (ISO)
niclosamide  (ISO)
nicotine  (EXP)
nifedipine  (EXP,ISO)
ochratoxin A  (ISO)
olanzapine  (ISO)
paclitaxel  (ISO)
paracetamol  (EXP)
PCB138  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
phencyclidine  (EXP)
phenylephrine  (ISO)
piperonyl butoxide  (EXP)
pirinixic acid  (EXP,ISO)
platycodin D  (ISO)
quercetin  (EXP)
resveratrol  (EXP)
risperidone  (ISO)
rotenone  (EXP)
S-allylcysteine  (ISO)
SCH 23390  (ISO)
silicon dioxide  (ISO)
sirolimus  (ISO)
sodium arsenite  (ISO)
sodium benzoate  (ISO)
sodium fluoride  (EXP)
streptozocin  (EXP,ISO)
sulfur dioxide  (ISO)
titanium dioxide  (EXP)
trichloroethene  (ISO)
trichostatin A  (ISO)
trifluoperazine  (ISO)
tris(2-chloroethyl) phosphate  (ISO)
U-73122  (ISO)
valproic acid  (EXP,ISO)
venlafaxine hydrochloride  (ISO)
verapamil  (ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal avoidance learning behavior  (IAGP)
abnormal CNS synaptic transmission  (IAGP)
abnormal contextual conditioning behavior  (IAGP)
abnormal cued conditioning behavior  (IAGP)
abnormal cutaneous/subcutaneous mechanoreceptor morphology  (IAGP)
abnormal dendrite morphology  (IAGP)
abnormal dentate gyrus morphology  (IAGP)
abnormal depression-related behavior  (IAGP)
abnormal excitatory postsynaptic currents  (IAGP)
abnormal excitatory postsynaptic potential  (IAGP)
abnormal hippocampus granule cell morphology  (IAGP)
abnormal locomotor behavior  (IAGP)
abnormal long-term depression  (IAGP)
abnormal long-term potentiation  (IAGP)
abnormal neuron morphology  (IAGP)
abnormal neuron physiology  (IAGP)
abnormal postsynaptic density morphology  (IAGP)
abnormal response to social novelty  (IAGP)
abnormal short-term spatial reference memory  (IAGP)
abnormal skin condition  (IAGP)
abnormal social/conspecific interaction behavior  (IAGP)
abnormal spatial learning  (IAGP)
abnormal synapse morphology  (IAGP)
abnormal synaptic plasticity  (IAGP)
abnormal synaptic transmission  (IAGP)
abnormal synaptic vesicle morphology  (IAGP)
abnormal synaptic vesicle number  (IAGP)
absent long-term depression  (IAGP)
circling  (IAGP)
decreased anxiety-related response  (IAGP)
decreased body weight  (IAGP)
decreased exploration in new environment  (IAGP)
decreased paired-pulse facilitation  (IAGP)
decreased survivor rate  (IAGP)
enhanced coordination  (IAGP)
enhanced long-term potentiation  (IAGP)
hyperactivity  (IAGP)
impaired contextual conditioning behavior  (IAGP)
impaired long-term object recognition memory  (IAGP)
impaired spatial learning  (IAGP)
impaired spatial working memory  (IAGP)
impaired synaptic plasticity  (IAGP)
increased aggression towards mice  (IAGP)
increased cell proliferation  (IAGP)
increased cerebral infarct size  (IAGP)
increased locomotor activity  (IAGP)
increased thigmotaxis  (IAGP)
increased vertical activity  (IAGP)
premature death  (IAGP)
reduced long-term depression  (IAGP)
reduced long-term potentiation  (IAGP)
seizures  (IAGP)
sporadic seizures  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Localization of CaMKIIalpha in rat primary sensory neurons: increase in inflammation. Carlton SM Brain Res. 2002 Aug 30;947(2):252-9.
2. CaMKII regulation in information processing and storage. Coultrap SJ and Bayer KU, Trends Neurosci. 2012 Oct;35(10):607-18. doi: 10.1016/j.tins.2012.05.003. Epub 2012 Jun 19.
3. Alpha-CaMKII-dependent plasticity in the cortex is required for permanent memory. Frankland PW, etal., Nature 2001 May 17;411(6835):309-13.
4. Autophosphorylation at Thr286 of the alpha calcium-calmodulin kinase II in LTP and learning. Giese KP, etal., Science 1998 Feb 6;279(5352):870-3.
5. Secondary hyperalgesia in the postoperative pain model is dependent on spinal calcium/calmodulin-dependent protein kinase II alpha activation. Jones TL, etal., Anesth Analg. 2007 Dec;105(6):1650-6, table of contents.
6. Mechanisms of CaMKII action in long-term potentiation. Lisman J, etal., Nat Rev Neurosci. 2012 Feb 15;13(3):169-82. doi: 10.1038/nrn3192.
7. Protein kinase C-gamma and calcium/calmodulin-dependent protein kinase II-alpha are persistently translocated to cell membranes of the rat brain during and after middle cerebral artery occlusion. Matsumoto S, etal., J Cereb Blood Flow Metab 2004 Jan;24(1):54-61.
8. Phosphorylation state, solubility, and activity of calcium/calmodulin-dependent protein kinase II alpha in transient focal ischemia in mouse brain. Mengesdorf T, etal., Neurochem Res. 2002 Jun;27(6):477-84.
9. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
10. MGDs mouse GO annotations MGD data from the GO Consortium
11. MGD IEA MGD IEA
12. Vitamin D and calcium co-therapy mitigates pre-established cadmium nephropathy by regulating renal calcium homeostatic molecules and improving anti-oxidative and anti-inflammatory activities in rat. Obaid AA, etal., J Trace Elem Med Biol. 2023 May 24;79:127221. doi: 10.1016/j.jtemb.2023.127221.
13. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
14. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
15. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
16. Mouse MP Annotation Import Pipeline RGD automated import pipeline
17. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
18. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
19. Cerebral ischemia immediately increases serine phosphorylation of the synaptic RAS-GTPase activating protein SynGAP by calcium/calmodulin-dependent protein kinase II alpha in hippocampus of rats. Song B, etal., Neurosci Lett. 2003 Oct 9;349(3):183-6.
20. Trichostatin A protects against cisplatin-induced ototoxicity by regulating expression of genes related to apoptosis and synaptic function. Wang P, etal., Neurotoxicology. 2013 Jul;37:51-62. doi: 10.1016/j.neuro.2013.03.007. Epub 2013 Apr 1.
21. The expression of calcium/calmodulin-dependent protein kinase II-alpha in the hippocampus of patients with Alzheimer's disease and its links with AD-related pathology. Wang YJ, etal., Brain Res. 2005 Jan 7;1031(1):101-8. doi: 10.1016/j.brainres.2004.10.061.
22. A 63 signature genes prediction system is effective for glioblastoma prognosis. Zhang Y, etal., Int J Mol Med. 2018 Apr;41(4):2070-2078. doi: 10.3892/ijmm.2018.3422. Epub 2018 Jan 25.
Additional References at PubMed
PMID:1319776   PMID:1321493   PMID:1339689   PMID:1354644   PMID:1378648   PMID:2543961   PMID:2550458   PMID:7649368   PMID:7775466   PMID:7939668   PMID:7953554   PMID:8524307  
PMID:8530541   PMID:8602534   PMID:8816712   PMID:8889548   PMID:8939606   PMID:8939850   PMID:9096402   PMID:9452387   PMID:9523577   PMID:9882483   PMID:10349636   PMID:10381553  
PMID:10454359   PMID:10686608   PMID:10767319   PMID:10790881   PMID:10862698   PMID:10966622   PMID:11042159   PMID:11042368   PMID:11076861   PMID:11217851   PMID:11239428   PMID:11264466  
PMID:11713472   PMID:11739749   PMID:11889801   PMID:11967152   PMID:12147342   PMID:12223541   PMID:12231258   PMID:12408850   PMID:12408851   PMID:12408852   PMID:12477932   PMID:12531901  
PMID:12554746   PMID:12618516   PMID:12629219   PMID:12646704   PMID:12660151   PMID:12684449   PMID:12693553   PMID:12769848   PMID:12798302   PMID:12805283   PMID:12824452   PMID:12904583  
PMID:12931786   PMID:14610273   PMID:14725635   PMID:14734049   PMID:15073522   PMID:15102471   PMID:15131309   PMID:15135664   PMID:15140879   PMID:15464294   PMID:15489334   PMID:15572359  
PMID:15582152   PMID:15590632   PMID:15648052   PMID:15664178   PMID:15778710   PMID:15793582   PMID:15927279   PMID:15994560   PMID:16091425   PMID:16107656   PMID:16120608   PMID:16126302  
PMID:16141072   PMID:16141073   PMID:16157407   PMID:16172120   PMID:16186118   PMID:16191394   PMID:16207525   PMID:16253986   PMID:16260731   PMID:16260732   PMID:16441656   PMID:16512683  
PMID:16515554   PMID:16519936   PMID:16602821   PMID:16616897   PMID:16630070   PMID:16635246   PMID:16651267   PMID:16690036   PMID:16710293   PMID:16728448   PMID:16776832   PMID:16820363  
PMID:16824507   PMID:16840718   PMID:16861697   PMID:16863646   PMID:16875841   PMID:16959763   PMID:16982427   PMID:17052727   PMID:17114649   PMID:17124502   PMID:17184923   PMID:17202430  
PMID:17259980   PMID:17277773   PMID:17292391   PMID:17367784   PMID:17445244   PMID:17455234   PMID:17603011   PMID:17610578   PMID:17625814   PMID:17634379   PMID:17640289   PMID:17660813  
PMID:17689560   PMID:17884930   PMID:17923476   PMID:17923693   PMID:17953618   PMID:18045856   PMID:18048055   PMID:18054865   PMID:18066053   PMID:18077696   PMID:18082335   PMID:18178903  
PMID:18255058   PMID:18287559   PMID:18305102   PMID:18351675   PMID:18413649   PMID:18464936   PMID:18480293   PMID:18550767   PMID:18551708   PMID:18613116   PMID:18614564   PMID:18622016  
PMID:18690039   PMID:18703025   PMID:18727829   PMID:18799693   PMID:18803808   PMID:18809727   PMID:18818394   PMID:18948074   PMID:18957226   PMID:18984565   PMID:19138174   PMID:19190753  
PMID:19208628   PMID:19217379   PMID:19233146   PMID:19240035   PMID:19245842   PMID:19257910   PMID:19276108   PMID:19332541   PMID:19339497   PMID:19362146   PMID:19439493   PMID:19455133  
PMID:19457128   PMID:19478130   PMID:19485558   PMID:19515929   PMID:19603549   PMID:19605628   PMID:19609731   PMID:19654320   PMID:19671701   PMID:19735294   PMID:19735476   PMID:19750198  
PMID:19776387   PMID:19799774   PMID:19840220   PMID:19934217   PMID:19996366   PMID:20060004   PMID:20124353   PMID:20141836   PMID:20215576   PMID:20237283   PMID:20336626   PMID:20371813  
PMID:20392935   PMID:20479240   PMID:20538682   PMID:20643921   PMID:20877009   PMID:20976158   PMID:21068402   PMID:21166200   PMID:21187407   PMID:21209221   PMID:21252154   PMID:21267068  
PMID:21276220   PMID:21307321   PMID:21343908   PMID:21491429   PMID:21516102   PMID:21610080   PMID:21614506   PMID:21627991   PMID:21677750   PMID:21752990   PMID:21785215   PMID:21833587  
PMID:21850207   PMID:21873635   PMID:21903107   PMID:21925648   PMID:21927594   PMID:22025701   PMID:22234183   PMID:22348105   PMID:22363696   PMID:22427508   PMID:22427672   PMID:22454450  
PMID:22496563   PMID:22503562   PMID:22505582   PMID:22560297   PMID:22573680   PMID:22647634   PMID:22736516   PMID:22768241   PMID:22778257   PMID:22794259   PMID:22796260   PMID:22815963  
PMID:22855824   PMID:22952977   PMID:22993434   PMID:23028932   PMID:23051746   PMID:23063718   PMID:23089915   PMID:23173822   PMID:23223335   PMID:23227957   PMID:23313759   PMID:23316062  
PMID:23386589   PMID:23389689   PMID:23402759   PMID:23502535   PMID:23516528   PMID:23632380   PMID:23652597   PMID:23660191   PMID:23720740   PMID:23732653   PMID:23753415   PMID:23884469  
PMID:23958294   PMID:24038144   PMID:24095281   PMID:24101510   PMID:24136198   PMID:24164423   PMID:24193728   PMID:24248603   PMID:24336150   PMID:24374198   PMID:24418021   PMID:24448406  
PMID:24480420   PMID:24485660   PMID:24496615   PMID:24498331   PMID:24576293   PMID:24627477   PMID:24725413   PMID:24734203   PMID:24806094   PMID:24831007   PMID:24831701   PMID:24852843  
PMID:24949568   PMID:24952961   PMID:25042347   PMID:25073061   PMID:25097034   PMID:25131634   PMID:25143599   PMID:25186740   PMID:25246560   PMID:25290264   PMID:25297099   PMID:25389288  
PMID:25540577   PMID:25560761   PMID:25644714   PMID:25650780   PMID:25834039   PMID:25834051   PMID:25843407   PMID:25885040   PMID:25922519   PMID:26019340   PMID:26095350   PMID:26166359  
PMID:26247621   PMID:26281891   PMID:26292186   PMID:26297240   PMID:26300473   PMID:26372002   PMID:26415772   PMID:26485112   PMID:26485287   PMID:26490852   PMID:26572936   PMID:26627310  
PMID:26670047   PMID:26880306   PMID:26932671   PMID:27005420   PMID:27028761   PMID:27059140   PMID:27158969   PMID:27170659   PMID:27352031   PMID:27496951   PMID:27507650   PMID:27535377  
PMID:27648519   PMID:27918287   PMID:27926480   PMID:28069946   PMID:28130356   PMID:28137877   PMID:28147268   PMID:28230177   PMID:28295333   PMID:28344592   PMID:28361052   PMID:28521133  
PMID:28527717   PMID:28548932   PMID:28589927   PMID:28634551   PMID:28636948   PMID:28642476   PMID:28648815   PMID:28662005   PMID:28671696   PMID:28706196   PMID:28714806   PMID:29042611  
PMID:29056297   PMID:29081444   PMID:29107547   PMID:29137928   PMID:29146590   PMID:29254152   PMID:29402414   PMID:29518331   PMID:29599132   PMID:29602494   PMID:29615706   PMID:29786085  
PMID:29978952   PMID:30104731   PMID:30225347   PMID:30232223   PMID:30282777   PMID:30326594   PMID:30466882   PMID:30504773   PMID:30509490   PMID:30562941   PMID:30675529   PMID:30770570  
PMID:30814928   PMID:30894537   PMID:30992372   PMID:31034488   PMID:31064859   PMID:31134625   PMID:31151856   PMID:31239443   PMID:31445077   PMID:31481791   PMID:31530151   PMID:31600191  
PMID:31712124   PMID:31800021   PMID:31836540   PMID:31914378   PMID:31983435   PMID:32001612   PMID:32005752   PMID:32005763   PMID:32019829   PMID:32407818   PMID:32434143   PMID:32776935  
PMID:32887881   PMID:33086056   PMID:33497737   PMID:33601422   PMID:33786818   PMID:33804598   PMID:33946543   PMID:34062838   PMID:34103655   PMID:34297923   PMID:34558218   PMID:34572045  
PMID:34587162   PMID:34628110   PMID:34687697   PMID:34908526   PMID:34932950   PMID:35649371   PMID:35901933   PMID:36304100   PMID:36337049   PMID:36417873   PMID:36808153   PMID:37186439  
PMID:37307456   PMID:37490545   PMID:37672577   PMID:37874884  


Genomics

Comparative Map Data
Camk2a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391861,058,704 - 61,121,224 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1861,058,690 - 61,121,224 (+)EnsemblGRCm39 Ensembl
GRCm381860,925,307 - 60,988,152 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1860,925,618 - 60,988,152 (+)EnsemblGRCm38mm10GRCm38
MGSCv371861,085,286 - 61,147,806 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361861,051,001 - 61,113,513 (+)NCBIMGSCv36mm8
Celera1862,212,530 - 62,274,768 (+)NCBICelera
Cytogenetic Map18E1NCBI
cM Map1834.41NCBI
CAMK2A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385150,219,491 - 150,290,130 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5150,219,491 - 150,290,093 (-)EnsemblGRCh38hg38GRCh38
GRCh375149,599,054 - 149,669,693 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365149,579,248 - 149,649,529 (-)NCBINCBI36Build 36hg18NCBI36
Build 345149,579,247 - 149,649,529NCBI
Celera5145,680,447 - 145,750,799 (-)NCBICelera
Cytogenetic Map5q32NCBI
HuRef5144,747,170 - 144,817,356 (-)NCBIHuRef
CHM1_15149,031,647 - 149,101,993 (-)NCBICHM1_1
T2T-CHM13v2.05150,756,093 - 150,826,669 (-)NCBIT2T-CHM13v2.0
Camk2a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81856,648,779 - 56,711,505 (+)NCBIGRCr8
mRatBN7.21854,378,642 - 54,441,120 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1854,378,784 - 54,438,994 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1856,467,554 - 56,526,074 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01857,182,163 - 57,240,684 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01855,002,670 - 55,061,881 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01856,193,978 - 56,295,869 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1856,193,978 - 56,295,869 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01855,428,487 - 55,463,016 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01855,514,559 - 55,529,045 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41856,879,247 - 56,948,537 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11856,951,478 - 57,020,769 (+)NCBI
Celera1852,533,226 - 52,592,130 (+)NCBICelera
Cytogenetic Map18q12.1NCBI
Camk2a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554154,247,014 - 4,307,458 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554154,247,307 - 4,307,402 (+)NCBIChiLan1.0ChiLan1.0
CAMK2A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24145,448,477 - 145,518,496 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15143,588,026 - 143,658,043 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05145,644,164 - 145,714,143 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15151,649,062 - 151,719,373 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5151,649,062 - 151,719,373 (-)Ensemblpanpan1.1panPan2
CAMK2A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1458,800,818 - 58,865,830 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl458,800,813 - 58,865,830 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha458,567,052 - 58,631,982 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0459,281,664 - 59,346,612 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl459,281,703 - 59,346,615 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1459,070,398 - 59,135,346 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0459,184,686 - 59,249,804 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0459,715,947 - 59,780,872 (+)NCBIUU_Cfam_GSD_1.0
Camk2a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213143,064,159 - 143,126,577 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365044,638,176 - 4,700,984 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365044,636,863 - 4,700,887 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CAMK2A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2151,248,358 - 151,308,706 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12151,248,356 - 151,353,907 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22158,335,771 - 158,396,987 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CAMK2A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12352,829,438 - 52,899,428 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2352,829,350 - 52,899,375 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603424,817,181 - 24,887,318 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Camk2a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247749,526,323 - 9,585,649 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247749,526,323 - 9,585,647 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Camk2a
2017 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3348
Count of miRNA genes:789
Interacting mature miRNAs:1060
Transcripts:ENSMUST00000025519, ENSMUST00000039904, ENSMUST00000102888, ENSMUST00000115295, ENSMUST00000115297, ENSMUST00000134496, ENSMUST00000137805
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558849W3q15_mweight 3 weeks QTL 15 (mouse)Not determined18504111961272643Mouse
1357603Mom3_mmodifier of Min 3 (mouse)Not determined181403002367098962Mouse
25823173Hrsq12_mhost response to SARS QTL 12, hemorrhage (mouse)182489588178339555Mouse
1301400Lmr13_mleishmaniasis resistance 13 (mouse)Not determined182810938062109518Mouse
4141857Mhysq5_mmale hybrid sterility QTL 5 (mouse)Not determined2813060462130739Mouse
1302163Bmd16_mbone mineral density 16 (mouse)Not determined182966791463668060Mouse
12880412V125Dq12_mvitamin D active form serum level QTL 12 (mouse)183023306764233067Mouse
1300685Scc5_mcolon tumor susceptibility 5 (mouse)Not determined183198848065988629Mouse
1357690Vtbt19_mvertebral trabecular bone trait 19 (mouse)Not determined183309104367091221Mouse
1301771Pcyts6_mplasmacytoma susceptibility 6 (mouse)Not determined183565863269658851Mouse
4142366Chlq10_mcirculating hormone level QTL 10 (mouse)Not determined183629102270291180Mouse
15039381Ltgq8_mliver triglyceride QTL 8 (mouse)183820656972206569Mouse
15039383Mvlq5_mmicrovesicular liver lesion QTL 5 (mouse)183820656972206569Mouse
15039384Liviq1_mliver inflammation QTL 1 (mouse)183820656972206569Mouse
15039386Mvlq4_mmacrovesicular liver lesion QTL 4 (mouse)183820656972206569Mouse
12050070Nabq2_mnasal bone morphology QTL 2 (mouse)183910367773103793Mouse
1357639Obsty4_mobesity 4 (mouse)Not determined183961991484638778Mouse
1301902Hrtfm4_mheart failure modifier 4 (mouse)Not determined184331112077311343Mouse
1301215Thcr_mT helper cell response (mouse)Not determined184513060468778777Mouse
12904745Carcdq2_mcardiac collagen deposition QTL 2 (mouse)184642328780423287Mouse
11039493Ltpr8d_mLeishmania tropica response 8d (mouse)184687490380875042Mouse
11039494Ltpr8b_mLeishmania tropica response 8b (mouse)184687490380875042Mouse
27226720Tibw5_mtibia width 5, proximal, 10 week (mouse)185043306762633071Mouse
1357630Tgq1_mtriglyceride QTL 1 (mouse)Not determined185105215685052311Mouse
11252137Modvl5_mmodifier of vacuolated lens 5 (mouse)185105215685052311Mouse
10412244Par5_mpulmonary adenoma resistance 5 (mouse)Not determined185166830085668468Mouse
1302099Hdlq30_mHDL QTL 30 (mouse)Not determined185166830085668468Mouse
1301853Heal9_mwound healing/regeneration 9 (mouse)Not determined185280527686805416Mouse
1302050Radpf4_mradiation pulmonary fibrosis 4 (mouse)Not determined185296615668778777Mouse
4142443Pgis1_mproteoglycan induced spondylitis 1 (mouse)Not determined185329102276914293Mouse
4141431Msmr2_mMSM lymphoma resistance 2 (mouse)Not determined5497587361238870Mouse
1301500Szs4_mseizure susceptibility 4 (mouse)Not determined185497587385514143Mouse
12880410V125Dq13_mvitamin D active form serum level QTL 13 (mouse)185643307190433071Mouse
12880430Fgf23lq4_mFGF23 serum level QTL 4 (mouse)185643307190433071Mouse
10412183Sstapa2_mSuseptibility to Staphylococus aureus infection 2 (mouse)Not determined185679463066952485Mouse
12880428V125Dq14_mvitamin D active form serum level QTL 14 (mouse)185743307190720763Mouse
1301353Lbw6_mlupus NZB x NZW 6 (mouse)Not determined185756233890720763Mouse
4141132Eae18_mexperimental allergic encephalomyelitis susceptibility 18 (mouse)Not determined5759055982604728Mouse
4140971Mbmq1_mmale body mass QTL 1 (mouse)Not determined5799028190720763Mouse
12910791Pwgrq8_mpre-weaning growth rate QTL 8 (mouse)185802139969349142Mouse
11049564Lmr29_mleishmaniasis resistance 29 (mouse)185918009290720763Mouse
11039495Ltpr8c_mLeishmania tropica response 8c (mouse)185918009290720763Mouse
11039492Ltpr8a_mLeishmania tropica response 8a (mouse)185918009290720763Mouse
1301103Pgia11_mproteoglycan induced arthritis 11 (mouse)Not determined185991418490720763Mouse
1302109Sluc28_msusceptibility to lung cancer 28 (mouse)Not determined185993532190720763Mouse
38455998Cdtm1_mCD62L+ CD8 TM cells 1 (mouse)186013307280043215Mouse

Markers in Region
RH125135  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381860,987,492 - 60,987,609UniSTSGRCm38
MGSCv371861,147,146 - 61,147,263UniSTSGRCm37
Celera1862,274,420 - 62,274,537UniSTS
Cytogenetic Map18E1UniSTS
cM Map1833.0UniSTS
UniSTS:225275  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381860,987,359 - 60,987,514UniSTSGRCm38
MGSCv371861,147,013 - 61,147,168UniSTSGRCm37
Celera1862,274,287 - 62,274,442UniSTS
Cytogenetic Map18E1UniSTS
cM Map1833.0UniSTS
Camk2a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381860,984,406 - 60,984,834UniSTSGRCm38
MGSCv371861,144,060 - 61,144,488UniSTSGRCm37
Celera1862,271,342 - 62,271,770UniSTS
Cytogenetic Map18E1UniSTS
cM Map1833.0UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001286809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_177407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC124431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ222796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW490258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB659027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY713276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X14836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X87142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000025519   ⟹   ENSMUSP00000025519
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1861,058,704 - 61,119,479 (+)Ensembl
GRCm38.p6 Ensembl1860,925,632 - 60,986,407 (+)Ensembl
RefSeq Acc Id: ENSMUST00000039904   ⟹   ENSMUSP00000048325
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1861,096,672 - 61,118,769 (+)Ensembl
GRCm38.p6 Ensembl1860,963,600 - 60,985,697 (+)Ensembl
RefSeq Acc Id: ENSMUST00000102888   ⟹   ENSMUSP00000099952
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1861,058,690 - 61,121,224 (+)Ensembl
GRCm38.p6 Ensembl1860,925,618 - 60,988,152 (+)Ensembl
RefSeq Acc Id: ENSMUST00000115295   ⟹   ENSMUSP00000110950
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1861,096,626 - 61,117,935 (+)Ensembl
GRCm38.p6 Ensembl1860,963,554 - 60,984,863 (+)Ensembl
RefSeq Acc Id: ENSMUST00000115297   ⟹   ENSMUSP00000110952
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1861,058,797 - 61,076,468 (+)Ensembl
GRCm38.p6 Ensembl1860,925,725 - 60,943,396 (+)Ensembl
RefSeq Acc Id: ENSMUST00000134496
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1861,058,704 - 61,076,450 (+)Ensembl
GRCm38.p6 Ensembl1860,925,632 - 60,943,378 (+)Ensembl
RefSeq Acc Id: ENSMUST00000137805   ⟹   ENSMUSP00000123480
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1861,060,021 - 61,088,711 (+)Ensembl
GRCm38.p6 Ensembl1860,926,949 - 60,955,639 (+)Ensembl
RefSeq Acc Id: NM_001286809   ⟹   NP_001273738
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391861,096,626 - 61,121,224 (+)NCBI
GRCm381860,963,554 - 60,988,152 (+)NCBI
Celera1862,212,530 - 62,274,768 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001403309   ⟹   NP_001390238
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391861,058,704 - 61,121,224 (+)NCBI
RefSeq Acc Id: NM_001403312   ⟹   NP_001390241
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391861,058,704 - 61,117,633 (+)NCBI
RefSeq Acc Id: NM_009792   ⟹   NP_033922
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391861,096,626 - 61,121,224 (+)NCBI
GRCm381860,963,554 - 60,988,152 (+)NCBI
MGSCv371861,085,286 - 61,147,806 (+)RGD
Celera1862,212,530 - 62,274,768 (+)RGD
cM Map18 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_177407   ⟹   NP_803126
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391861,058,704 - 61,121,224 (+)NCBI
GRCm381860,925,632 - 60,988,152 (+)NCBI
MGSCv371861,085,286 - 61,147,806 (+)RGD
Celera1862,212,530 - 62,274,768 (+)RGD
cM Map18 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_033922   ⟸   NM_009792
- Peptide Label: isoform 1
- UniProtKB: P11798 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_803126   ⟸   NM_177407
- Peptide Label: isoform 2
- UniProtKB: Q61284 (UniProtKB/Swiss-Prot),   Q6ZWN4 (UniProtKB/Swiss-Prot),   P11798 (UniProtKB/Swiss-Prot),   Q80TN1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273738   ⟸   NM_001286809
- Peptide Label: isoform 3
- UniProtKB: F8WHB5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000110952   ⟸   ENSMUST00000115297
RefSeq Acc Id: ENSMUSP00000110950   ⟸   ENSMUST00000115295
RefSeq Acc Id: ENSMUSP00000123480   ⟸   ENSMUST00000137805
RefSeq Acc Id: ENSMUSP00000025519   ⟸   ENSMUST00000025519
RefSeq Acc Id: ENSMUSP00000048325   ⟸   ENSMUST00000039904
RefSeq Acc Id: ENSMUSP00000099952   ⟸   ENSMUST00000102888
RefSeq Acc Id: NP_001390238   ⟸   NM_001403309
- Peptide Label: isoform 4
- UniProtKB: F8WIS9 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001390241   ⟸   NM_001403312
- Peptide Label: isoform 2
Protein Domains
Calcium/calmodulin-dependent protein kinase II   Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P11798-F1-model_v2 AlphaFold P11798 1-478 view protein structure

Promoters
RGD ID:13677922
Promoter ID:EPDNEW_M23110
Type:initiation region
Name:Camk2a_1
Description:Mus musculus calcium/calmodulin-dependent protein kinase II alpha, transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381860,925,632 - 60,925,692EPDNEW
RGD ID:6829126
Promoter ID:MM_KWN:25410
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000025519,   ENSMUST00000115297,   OTTMUST00000039175,   OTTMUST00000039177
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361861,084,766 - 61,085,367 (+)MPROMDB
RGD ID:6829128
Promoter ID:MM_KWN:25411
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000039179
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361861,086,566 - 61,087,066 (+)MPROMDB
RGD ID:6829125
Promoter ID:MM_KWN:25412
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000039904,   NM_009792
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361861,123,016 - 61,123,617 (+)MPROMDB
RGD ID:6847487
Promoter ID:MM_ACW:25101
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Brain
Transcripts:CAMK2A.ISEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361861,137,586 - 61,138,086 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:88256 AgrOrtholog
Ensembl Genes ENSMUSG00000024617 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000025519 ENTREZGENE
  ENSMUST00000025519.11 UniProtKB/TrEMBL
  ENSMUST00000039904 ENTREZGENE
  ENSMUST00000039904.7 UniProtKB/TrEMBL
  ENSMUST00000102888 ENTREZGENE
  ENSMUST00000102888.10 UniProtKB/Swiss-Prot
  ENSMUST00000115295 ENTREZGENE
  ENSMUST00000115295.9 UniProtKB/Swiss-Prot
  ENSMUST00000115297.8 UniProtKB/TrEMBL
  ENSMUST00000137805.3 UniProtKB/TrEMBL
Gene3D-CATH 3.10.450.50 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  6.10.140.620 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ca/CaM-dep_prot_kinase-assoc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NTF2-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12322 UniProtKB/Swiss-Prot
MGD MGI:88256 ENTREZGENE
NCBI Gene 12322 ENTREZGENE
PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE TYPE II SUBUNIT ALPHA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SERINE/THREONINE-PROTEIN KINASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CaMKII_AD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Camk2a PhenoGen
PROSITE PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54427 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3Z7K9_MOUSE UniProtKB/TrEMBL
  F6WHR9_MOUSE UniProtKB/TrEMBL
  F8WHB5 ENTREZGENE, UniProtKB/TrEMBL
  F8WIS9 ENTREZGENE, UniProtKB/TrEMBL
  KCC2A_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q61284 ENTREZGENE
  Q6ZWN4 ENTREZGENE
  Q80TN1 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary Q61284 UniProtKB/Swiss-Prot
  Q6ZWN4 UniProtKB/Swiss-Prot