Atp1b3 (ATPase, Na+/K+ transporting, beta 3 polypeptide) - Rat Genome Database

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Gene: Atp1b3 (ATPase, Na+/K+ transporting, beta 3 polypeptide) Mus musculus
Analyze
Symbol: Atp1b3
Name: ATPase, Na+/K+ transporting, beta 3 polypeptide
RGD ID: 10209
MGI Page MGI
Description: Predicted to enable several functions, including ATPase activator activity; ATPase binding activity; and P-type sodium:potassium-exchanging transporter activity. Predicted to be involved in several processes, including intracellular monoatomic cation homeostasis; monoatomic cation transmembrane transport; and positive regulation of cation transmembrane transport. Predicted to act upstream of or within monoatomic ion transport. Located in cytoplasm. Is expressed in several structures, including early conceptus; heart; hemolymphoid system; nervous system; and sensory organ. Orthologous to human ATP1B3 (ATPase Na+/K+ transporting subunit beta 3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AA409958; AI664000; ATPase, Na+/K+ beta 3 polypeptide; ATPB-3; AW212096; Na K-ATPase beta-3 subunit; sodium/potassium-dependent ATPase subunit beta-3; sodium/potassium-transporting ATPase subunit beta-3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm1848  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39996,214,708 - 96,246,368 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl996,214,708 - 96,246,495 (-)EnsemblGRCm39 Ensembl
GRCm38996,332,655 - 96,364,431 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl996,332,655 - 96,364,442 (-)EnsemblGRCm38mm10GRCm38
MGSCv37996,233,092 - 96,264,718 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36996,142,025 - 96,173,651 (-)NCBIMGSCv36mm8
Celera995,886,766 - 95,920,080 (-)NCBICelera
Cytogenetic Map9E3.3NCBI
cM Map950.31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-methylcholine  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4-hydroxynon-2-enal  (ISO)
4-tert-Octylphenol  (ISO)
6-propyl-2-thiouracil  (ISO)
aconitine  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
Aroclor 1254  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (EXP)
benzene  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-naphthoflavone  (EXP)
bisphenol A  (ISO)
Bisphenol B  (ISO)
C60 fullerene  (ISO)
caffeine  (ISO)
chlordecone  (EXP)
ciglitazone  (ISO)
cisplatin  (ISO)
cocaine  (EXP)
cyclosporin A  (ISO)
dexamethasone  (ISO)
dextran sulfate  (EXP)
dibutyl phthalate  (ISO)
diethylstilbestrol  (ISO)
dimethyl sulfoxide  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
enzyme inhibitor  (ISO)
ethanol  (ISO)
fipronil  (ISO)
flutamide  (ISO)
folic acid  (EXP)
genistein  (ISO)
gentamycin  (ISO)
haloperidol  (ISO)
hydrogen peroxide  (ISO)
ivermectin  (ISO)
lycopene  (EXP)
mercury atom  (ISO)
mercury(0)  (ISO)
Mesaconitine  (ISO)
methimazole  (ISO)
N-methyl-4-phenylpyridinium  (EXP)
N-methyl-N'-nitro-N-nitrosoguanidine  (ISO)
N-nitrosodiethylamine  (ISO)
nickel sulfate  (ISO)
p-tert-Amylphenol  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (EXP)
pirinixic acid  (EXP)
propiconazole  (ISO)
quercetin  (ISO)
resveratrol  (EXP)
Salinomycin  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
sodium fluoride  (EXP)
sulfadimethoxine  (ISO)
tacrolimus hydrate  (EXP)
tetrachloromethane  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
tolcapone  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
acebutolol pharmacodynamics pathway   (ISO)
adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway   (ISO)
aldosterone signaling pathway  (IEA)
alfentanil pharmacodynamics pathway  (ISO)
amiloride pharmacodynamics pathway  (ISO)
amiodarone pharmacodynamics pathway  (ISO)
amlodipine pharmacodynamics pathway  (ISO)
atenolol pharmacodynamics pathway  (ISO)
bendroflumethiazide pharmacodynamics pathway  (ISO)
betaxolol pharmacodynamics pathway  (ISO)
bile acid transport pathway  (IEA)
bisoprolol pharmacodynamics pathway  (ISO)
bumetanide pharmacodynamics pathway  (ISO)
bupivacaine pharmacodynamics pathway  (ISO)
bupranolol drug pathway  (ISO)
bupranolol pharmacodynamics pathway  (ISO)
buprenorphine pharmacodynamics pathway  (ISO)
carvedilol pharmacodynamics pathway  (ISO)
chloroprocaine pharmacodynamics pathway  (ISO)
chlorothiazide pharmacodynamics pathway  (ISO)
chlorthalidone pharmacodynamics pathway  (ISO)
citalopram pharmacodynamics pathway  (ISO)
cocaine pharmacodynamics pathway  (ISO)
codeine and morphine pharmacodynamics pathway  (ISO)
cystinuria pathway  (ISO)
desipramine pharmacodynamics pathway  (ISO)
diltiazem pharmacodynamics pathway  (ISO)
diphenoxylate pharmacodynamics pathway  (ISO)
disopyramide pharmacodynamics pathway  (ISO)
dobutamine pharmacodynamics pathway  (ISO)
eplerenone pharmacodynamics pathway  (ISO)
escitalopram pharmacodynamics pathway  (ISO)
esmolol pharmacodynamics pathway  (ISO)
etacrynic acid pharmacodynamics pathway  (ISO)
ethylmorphine pharmacodynamics pathway  (ISO)
fentanyl pharmacodynamics pathway  (ISO)
flecainde pharmacodynamics pathway  (ISO)
fluoxetine pharmacodynamics pathway  (ISO)
fosphenytoin pharmacodynamics pathway  (ISO)
furosemide pharmacodynamics pathway  (ISO)
Hartnup disease pathway  (ISO)
heroin pharmacodynamics pathway  (ISO)
hydrochlorothiazide pharmacodynamics pathway  (ISO)
hydrocodone pharmacodynamics pathway  (ISO)
hydroflumethiazide pharmacodynamics pathway  (ISO)
hydromorphone pharmacodynamics pathway  (ISO)
ibutilide pharmacodynamics pathway  (ISO)
iminoglycinuria pathway  (ISO)
imipramine pharmacodynamics pathway  (ISO)
isoprenaline pharmacodynamics pathway  (ISO)
isradipine pharmacodynamics pathway  (ISO)
lactose degradation pathway  (ISO)
levacetylmethadol pharmacodynamics pathway  (ISO)
levobunolol pharmacodynamics pathway  (ISO)
levobupivacaine phgarmacodynamics pathway  (ISO)
levorphanol pharmacodynamics pathway  (ISO)
lidocaine pharmacodynamics pathway  (ISO)
lysinuric protein intolerance pathway  (ISO)
mepivacaine pharmacodynamics pathway  (ISO)
methadone pharmacodynamics pathway  (ISO)
metolazone pharmacodynamics pathway  (ISO)
metoprolol pharmacodynamics pathway  (ISO)
mexiletine pharmacodynamics pathway  (ISO)
nadolol pharmacodynamics pathway  (ISO)
nalbuphine pharmacodynamics pathway  (ISO)
naloxone pharmacodynamics pathway  (ISO)
naltrexone pharmacodynamics pathway  (ISO)
nebivolol pharmacodynamics pathway  (ISO)
nicotine pharmacodynamics pathway  (ISO)
nifedipine pharmacodynamics pathway  (ISO)
nimodipine pharmacodynamics pathway  (ISO)
nisoldipine pharmacodynamics pathway  (ISO)
nitrendipine pharmacodynamics pathway  (ISO)
oxybuprocaine pharmacodynamics pathway  (ISO)
oxycodone pharmacodynamics pathway  (ISO)
oxymorphone pharmacodynamics pathway  (ISO)
penbutolol pharmacodynamics pathway  (ISO)
pentazocine pharmacodynamics pathway  (ISO)
phenytoin pharmacodynamics pathway  (ISO)
pindolol pharmacodynamics pathway  (ISO)
prilocaine pharmacodynamics pathway  (ISO)
procainamide pharmacodynamics pathway  (ISO)
procaine pharmacodynamics pathway  (ISO)
propranolol pharmacodynamics pathway  (ISO)
quinidine pharmacodynamics pathway  (ISO)
remifentanil pharmacodynamics pathway  (ISO)
ropivacaine pharmacodynamics pathway  (ISO)
sotalol pharmacodynamics pathway  (ISO)
spironolactone pharmacodynamics pathway  (ISO)
timolol pharmacodynamics pathway  (ISO)
torasemide pharmacodynamics pathway  (ISO)
tramadol pharmacodynamics pathway  (ISO)
trehalose degradation pathway  (ISO)
triamterene pharmacodynamics pathway  (ISO)
trichlormethiazide pharmacodynamics pathway  (ISO)
verapamil pharmacodynamics pathway  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7671812   PMID:8798450   PMID:8889548   PMID:9003452   PMID:9457675   PMID:9457684   PMID:10349636   PMID:10837135   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851  
PMID:12397396   PMID:12477932   PMID:12520002   PMID:14610273   PMID:14681479   PMID:15782199   PMID:16135750   PMID:16141072   PMID:16141073   PMID:16602821   PMID:18799693   PMID:19464798  
PMID:21267068   PMID:21731673   PMID:21873635   PMID:22079573   PMID:23676500   PMID:28994389   PMID:36293380  


Genomics

Comparative Map Data
Atp1b3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39996,214,708 - 96,246,368 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl996,214,708 - 96,246,495 (-)EnsemblGRCm39 Ensembl
GRCm38996,332,655 - 96,364,431 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl996,332,655 - 96,364,442 (-)EnsemblGRCm38mm10GRCm38
MGSCv37996,233,092 - 96,264,718 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36996,142,025 - 96,173,651 (-)NCBIMGSCv36mm8
Celera995,886,766 - 95,920,080 (-)NCBICelera
Cytogenetic Map9E3.3NCBI
cM Map950.31NCBI
ATP1B3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383141,876,643 - 141,926,549 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3141,876,124 - 141,926,549 (+)EnsemblGRCh38hg38GRCh38
GRCh373141,595,485 - 141,645,391 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363143,078,160 - 143,128,072 (+)NCBINCBI36Build 36hg18NCBI36
Build 343143,078,167 - 143,128,080NCBI
Celera3140,019,481 - 140,069,148 (+)NCBICelera
Cytogenetic Map3q23NCBI
HuRef3138,968,275 - 139,018,182 (+)NCBIHuRef
CHM1_13141,558,509 - 141,608,405 (+)NCBICHM1_1
T2T-CHM13v2.03144,623,941 - 144,673,839 (+)NCBIT2T-CHM13v2.0
Atp1b3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88105,789,824 - 105,821,151 (-)NCBIGRCr8
mRatBN7.2896,910,265 - 96,941,592 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl896,910,309 - 96,941,598 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8102,575,419 - 102,606,805 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08100,774,668 - 100,806,054 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0898,613,628 - 98,645,015 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08104,190,032 - 104,221,342 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8104,190,032 - 104,221,342 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08103,638,324 - 103,669,634 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48101,405,877 - 101,437,757 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18101,425,331 - 101,457,212 (-)NCBI
Celera896,353,742 - 96,384,785 (-)NCBICelera
Cytogenetic Map8q31NCBI
Atp1b3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555083,859,399 - 3,875,276 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555083,848,745 - 3,875,992 (-)NCBIChiLan1.0ChiLan1.0
ATP1B3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22139,780,084 - 139,831,746 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13139,784,817 - 139,836,609 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03138,903,371 - 138,954,915 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13146,500,493 - 146,550,164 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3146,500,493 - 146,550,164 (+)Ensemblpanpan1.1panPan2
ATP1B3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12337,684,507 - 37,727,535 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2337,684,506 - 37,726,746 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2337,675,590 - 37,719,488 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02338,214,455 - 38,258,634 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2338,214,096 - 38,258,581 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12337,897,059 - 37,940,955 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02337,974,038 - 38,017,944 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02338,217,485 - 38,261,376 (+)NCBIUU_Cfam_GSD_1.0
Atp1b3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560276,881,663 - 76,901,102 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365403,621,656 - 3,640,885 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATP1B3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11382,680,442 - 82,727,052 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21390,496,250 - 90,523,579 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ATP1B3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11548,691,224 - 48,742,336 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1548,690,667 - 48,742,385 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604121,627,404 - 21,678,499 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Atp1b3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473018,510,844 - 18,544,836 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473018,510,840 - 18,544,528 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Atp1b3
958 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:206
Count of miRNA genes:183
Interacting mature miRNAs:190
Transcripts:ENSMUST00000034983
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301636Lith5_mlithogenic gene 5 (mouse)Not determined966089077100089175Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989289476123289595Mouse
1301725Lifespan1_mlife span 1 (mouse)Not determined974250230108250378Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981680321115680445Mouse
1301484Bwq6_mbody weight (mouse)Not determined993591658124359700Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984406017118406120Mouse
1301869Tbbmd4_mtotal body bone mineral density 4 (mouse)Not determined976024387101406120Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978522698112522808Mouse
1301573Etohcta8_methanol conditioned taste aversion 8 (mouse)Not determined972859058106859205Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993591658124359700Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975682646114303447Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986121898120118690Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982792386116792481Mouse
1301924Bmd10_mbone mineral density 10 (mouse)Not determined968779563102779705Mouse
1357610Vtbt8_mvertebral trabecular bone trait 8 (mouse)Not determined968779563102779705Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963239711120191934Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989859058118767089Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63239711120191934Mouse
4141224Dxmod_mdoxorubicin nephropathy modifier (mouse)Not determined49452421101406120Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986107600120107729Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991518283124359700Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976417989110418183Mouse
1301241Renf1_mrenal failure 1 (mouse)Not determined95203447899792481Mouse
1301302Pas4_mpulmonary adenoma susceptibility 4 (mouse)Not determined969121898103121973Mouse
1301621Hpic1_mhaloperidol-induced catalepsy 1 (mouse)Not determined969428566103428698Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982792386116792481Mouse
10054068El8_mepilepsy 8 (mouse)Not determined972859058106859205Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979279863113279941Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975682646114303447Mouse
10045638Heal29_mwound healing/regeneration 29 (mouse)Not determined967006220101006220Mouse
10412174Habiir4_mhyperoxic acute lung injury imprinted region 4 (mouse)Not determined96926774798701707Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985779563108518385Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989162124123162124Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63239711120191934Mouse
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93730619798701707Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982792386116792481Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986625682120625682Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991518283124359700Mouse
14746992Manh67_mmandible shape 67 (mouse)993865836124359700Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991518283124359700Mouse
12910770Splic1_mspleen iron content 1 (mouse)991291078124359700Mouse
12910772Lvic6_mliver iron content 6 (mouse)991291078124359700Mouse
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959897283109089068Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991560372124359700Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994863354112701997Mouse
12910773Splic3_mspleen iron content 3 (mouse)991291078124359700Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991560372124359700Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991518283124359700Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991518283124359700Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991518283124359700Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987677199121677199Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991560372124359700Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989440541123440541Mouse

Markers in Region
RH135902  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38996,344,106 - 96,344,294UniSTSGRCm38
MGSCv37996,244,525 - 96,244,713UniSTSGRCm37
Celera995,898,175 - 95,898,363UniSTS
Cytogenetic Map9E3.3UniSTS
RH136202  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X21,147,229 - 21,147,421UniSTSGRCm38
GRCm38996,338,655 - 96,340,346UniSTSGRCm38
MGSCv37X20,724,355 - 20,724,547UniSTSGRCm37
MGSCv37996,239,074 - 96,240,765UniSTSGRCm37
CeleraX19,280,657 - 19,280,849UniSTS
Celera995,892,733 - 95,894,423UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map9E3.3UniSTS
AW212096  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38996,333,065 - 96,333,145UniSTSGRCm38
MGSCv37996,233,484 - 96,233,564UniSTSGRCm37
Celera995,887,155 - 95,887,235UniSTS
Celera988,552,015 - 88,552,095UniSTS
Cytogenetic Map9E3.3UniSTS
Whitehead/MRC_RH9992.34UniSTS
Atp1b3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38996,333,289 - 96,333,672UniSTSGRCm38
MGSCv37996,233,708 - 96,234,091UniSTSGRCm37
Celera995,887,379 - 95,887,762UniSTS
Celera988,551,485 - 88,551,869UniSTS
Cytogenetic Map9E3.3UniSTS
cM Map951.0UniSTS
D18396  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38996,332,840 - 96,332,960UniSTSGRCm38
MGSCv37996,233,259 - 96,233,379UniSTSGRCm37
Celera995,886,930 - 95,887,050UniSTS
Celera988,552,201 - 88,552,321UniSTS
Cytogenetic Map9E3.3UniSTS
Whitehead_YAC9 UniSTS
RH125905  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38996,332,702 - 96,332,951UniSTSGRCm38
MGSCv37996,233,121 - 96,233,370UniSTSGRCm37
Celera995,886,795 - 95,887,041UniSTS
Cytogenetic Map9E3.3UniSTS
RH143868  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38378,134,636 - 78,134,780UniSTSGRCm38
GRCm38X21,146,861 - 21,147,004UniSTSGRCm38
MGSCv37377,938,558 - 77,938,702UniSTSGRCm37
MGSCv37X20,723,987 - 20,724,130UniSTSGRCm37
CeleraX19,280,289 - 19,280,432UniSTS
Celera378,218,674 - 78,218,818UniSTS
Cytogenetic Map9E3.3UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map3E3UniSTS
UniSTS:236227  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38996,332,866 - 96,333,027UniSTSGRCm38
MGSCv37996,233,285 - 96,233,446UniSTSGRCm37
Celera995,886,956 - 95,887,117UniSTS
Cytogenetic Map9E3.3UniSTS
Atp1b3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9E3.3UniSTS
Atp1b3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9E3.3UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001357212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001357213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001411627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001411628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_007502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC117248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF016510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH007773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC114530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ174495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U59761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000034983   ⟹   ENSMUSP00000034983
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl996,214,708 - 96,246,495 (-)Ensembl
GRCm38.p6 Ensembl996,332,655 - 96,364,442 (-)Ensembl
RefSeq Acc Id: ENSMUST00000187341
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl996,227,858 - 96,231,429 (-)Ensembl
GRCm38.p6 Ensembl996,345,805 - 96,349,376 (-)Ensembl
RefSeq Acc Id: ENSMUST00000190045
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl996,220,721 - 96,225,634 (-)Ensembl
GRCm38.p6 Ensembl996,338,668 - 96,343,581 (-)Ensembl
RefSeq Acc Id: NM_001357212   ⟹   NP_001344141
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39996,214,708 - 96,246,368 (-)NCBI
GRCm38996,332,655 - 96,364,431 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001357213   ⟹   NP_001344142
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39996,214,708 - 96,246,368 (-)NCBI
GRCm38996,332,655 - 96,363,715 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001411627   ⟹   NP_001398556
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39996,214,708 - 96,246,368 (-)NCBI
RefSeq Acc Id: NM_001411628   ⟹   NP_001398557
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39996,214,708 - 96,246,368 (-)NCBI
RefSeq Acc Id: NM_007502   ⟹   NP_031528
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39996,214,708 - 96,246,368 (-)NCBI
GRCm38996,332,655 - 96,364,431 (-)NCBI
MGSCv37996,233,092 - 96,264,718 (-)RGD
Celera995,886,766 - 95,920,080 (-)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_031528   ⟸   NM_007502
- Peptide Label: isoform 1
- UniProtKB: P97370 (UniProtKB/Swiss-Prot),   Q544Q7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001344141   ⟸   NM_001357212
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001344142   ⟸   NM_001357213
- Peptide Label: isoform 3
RefSeq Acc Id: ENSMUSP00000034983   ⟸   ENSMUST00000034983
RefSeq Acc Id: NP_001398556   ⟸   NM_001411627
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001398557   ⟸   NM_001411628
- Peptide Label: isoform 3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P97370-F1-model_v2 AlphaFold P97370 1-278 view protein structure

Promoters
RGD ID:6848383
Promoter ID:MM_ACW:51667
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Lung
Transcripts:ATP1B3.HSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36996,233,529 - 96,234,029 (-)MPROMDB
RGD ID:6844197
Promoter ID:MM_KWN:58418
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:ENSMUST00000034983
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36996,264,276 - 96,265,122 (-)MPROMDB
RGD ID:8670492
Promoter ID:EPDNEW_M13277
Type:initiation region
Name:Atp1b3_1
Description:Mus musculus ATPase, Na+/K+ transporting, beta 3 polypeptide, transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38996,364,315 - 96,364,375EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:107788 AgrOrtholog
Ensembl Genes ENSMUSG00000032412 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000034983 ENTREZGENE
  ENSMUST00000034983.7 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.5.170 UniProtKB/TrEMBL
  2.60.40.1660 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Na/K_ATPase_sub_beta UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Na/K_ATPase_sub_beta_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11933 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:107788 ENTREZGENE
NCBI Gene 11933 ENTREZGENE
PANTHER PTHR11523 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA-3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Na_K-ATPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Atp1b3 PhenoGen
PROSITE ATPASE_NA_K_BETA_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt AT1B3_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q1WWL1_MOUSE UniProtKB/TrEMBL
  Q3U9D4_MOUSE UniProtKB/TrEMBL
  Q3UFH4_MOUSE UniProtKB/TrEMBL
  Q544Q7 ENTREZGENE, UniProtKB/TrEMBL
  Q71VC6_MOUSE UniProtKB/TrEMBL