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GENE - TERM ANNOTATION REPORT

5 Annotations Found.

An association has been curated linking Sox11 and positive regulation of transcription by RNA polymerase II in Rattus norvegicus.        

  • The association was inferred from mutant phenotype (IMP)
    		•  
  • The annotation was made from Kuhlbrodt K, etal., J Biol Chem 1998 Jun 26;273(26):16050-7.
  • 9 additional annotations were made from Kuhlbrodt K, etal., J Biol Chem 1998 Jun 26;273(26):16050-7.
  • 1343 RGD objects have been annotated to positive regulation of transcription by RNA polymerase II  (GO:0045944)
  • 14 papers in RGD have been used to annotate Sox11


    • An association has been curated linking Sox11 and positive regulation of transcription by RNA polymerase II in Rattus norvegicus.        

  • The association was inferred from sequence or structural similarity (ISS)
    		•  
  • The annotation was made from Dy P, etal., Nucleic Acids Res. 2008 May;36(9):3101-17. doi: 10.1093/nar/gkn162. Epub 2008 Apr 10.
  • The annotation has been inferred from sequence or structural similarity with UniProtKB:Q7M6Y2
  • 1343 RGD objects have been annotated to positive regulation of transcription by RNA polymerase II  (GO:0045944)
  • 14 papers in RGD have been used to annotate Sox11
  • Qualifier: involved_in
  • Curation Notes: PMID:18403418


    • An association has been curated linking Sox11 and positive regulation of transcription by RNA polymerase II in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with Sox11 (Mus musculus)
  • 1343 RGD objects have been annotated to positive regulation of transcription by RNA polymerase II  (GO:0045944)
  • 14 papers in RGD have been used to annotate Sox11
  • Qualifier: involved_in
  • Curation Notes: (MGI:3803393|PMID:18505825), (MGI:5009531|PMID:18403418)
  • Original References(s): MGI:3803393 MGI:5009531 PMID:18403418 PMID:18505825


    • An association has been curated linking Sox11 and positive regulation of transcription by RNA polymerase II in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with SOX11 (Homo sapiens)
  • 1343 RGD objects have been annotated to positive regulation of transcription by RNA polymerase II  (GO:0045944)
  • 14 papers in RGD have been used to annotate Sox11
  • Qualifier: involved_in
  • Curation Notes: (PMID:21124928)
  • Original References(s): PMID:21124928


    • An association has been curated linking Sox11 and positive regulation of transcription by RNA polymerase II in Rattus norvegicus.        

  • The association was inferred from biological aspect of ancestor (IBA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from biological aspect of ancestor with FB:FBgn0000411 & FB:FBgn0029123 & MGI:107543 & MGI:2654070 & MGI:98357 & MGI:98359 & MGI:98360 & MGI:98363 & MGI:98364 & MGI:98366 & PANTHER:PTN000030384 & PomBase:SPBC23G7.09 & Sox2 (Rattus norvegicus) & Sry (Rattus norvegicus) & Sox11 (Rattus norvegicus) & UniProtKB:P35713 & UniProtKB:P35716 & UniProtKB:P48430 & UniProtKB:P48431 & UniProtKB:Q06945 & UniProtKB:Q9H6I2
  • 1343 RGD objects have been annotated to positive regulation of transcription by RNA polymerase II  (GO:0045944)
  • 14 papers in RGD have been used to annotate Sox11
  • Qualifier: involved_in
  • Curation Notes: GO_REF:0000033
  • Original References(s): GO_REF:0000033


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