Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

2 Annotations Found.

An association has been curated linking Scn5a and sick sinus syndrome in Rattus norvegicus.        

  • The association was inferred from sequence or structural similarity (ISS)
    		•  
  • The annotation was made from RGD automated import pipeline for MGI gene-to-disease annotations
  • The annotation has been inferred from sequence or structural similarity with SCN5A (Homo sapiens)
  • 13 RGD objects have been annotated to sick sinus syndrome  (DOID:13884)
  • 32 papers in RGD have been used to annotate Scn5a
  • Curation Notes: OMIM:163800 | OMIM:608567 | OMIM:614090


    • An association has been curated linking Scn5a and sick sinus syndrome in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with SCN5A (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 13 RGD objects have been annotated to sick sinus syndrome  (DOID:13884)
  • 32 papers in RGD have been used to annotate Scn5a
  • Curation Notes: ClinVar Annotator: match by term: Sick sinus syndrome | ClinVar Annotator: match by term: Sinus node disease
  • Original References(s): PMID:10377081 PMID:10727653 PMID:10961955 PMID:10973849 PMID:11901046 PMID:12877697 PMID:14523039 PMID:15840476 PMID:16379539 PMID:16453024 PMID:18451998 PMID:18452873 PMID:18508782 PMID:19716085 PMID:19841300 PMID:20110800 PMID:20129283 PMID:20384651 PMID:20448214 PMID:20539757 PMID:21321465 PMID:22090166 PMID:22370247 PMID:22581653 PMID:22789973 PMID:23631430 PMID:24033266 PMID:24439875 PMID:24762805 PMID:24784157 PMID:24871449 PMID:25741868 PMID:26125038 PMID:26467025 PMID:27381756 PMID:27566755 PMID:28492532 PMID:28781849 PMID:29806494 PMID:30385166 PMID:31447099 PMID:31737537 PMID:32096284 PMID:32268277 PMID:32533187 PMID:32533946 PMID:32893267 PMID:33164571 PMID:34135346 PMID:34649698


    • Go Back to source page   Continue to Ontology report