Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

5 Annotations Found.

An association has been curated linking Mmp9 and temporal arteritis in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Segarra M, etal., Ann Rheum Dis. 2007 Nov;66(11):1429-35. Epub 2007 May 14.
  • The annotation has been inferred from sequence orthology with MMP9 (Homo sapiens) [(IDA) inferred from direct assay]
  • 5 additional annotations were made from Segarra M, etal., Ann Rheum Dis. 2007 Nov;66(11):1429-35. Epub 2007 May 14.
  • 22 RGD objects have been annotated to temporal arteritis  (DOID:13375)
  • 406 papers in RGD have been used to annotate Mmp9
  • Curation Notes: protein:increased activity:temporal artery


    • An association has been curated linking Mmp9 and temporal arteritis in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Rodriguez-Pla A, etal., Circulation. 2005 Jul 12;112(2):264-9. Epub 2005 Jul 5.
  • The annotation has been inferred from sequence orthology with MMP9 (Homo sapiens) [(IEP) inferred from expression pattern]
  • 2 additional annotations were made from Rodriguez-Pla A, etal., Circulation. 2005 Jul 12;112(2):264-9. Epub 2005 Jul 5.
  • 22 RGD objects have been annotated to temporal arteritis  (DOID:13375)
  • 406 papers in RGD have been used to annotate Mmp9
  • Curation Notes: protein:increased expression:temporal artery (human)


    • An association has been curated linking Mmp9 and temporal arteritis in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Rodriguez-Pla A, etal., Arthritis Rheum. 2008 Jun;58(6):1849-53. doi: 10.1002/art.23457.
  • The annotation has been inferred from sequence orthology with MMP9 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 5 additional annotations were made from Rodriguez-Pla A, etal., Arthritis Rheum. 2008 Jun;58(6):1849-53. doi: 10.1002/art.23457.
  • 22 RGD objects have been annotated to temporal arteritis  (DOID:13375)
  • 406 papers in RGD have been used to annotate Mmp9
  • Curation Notes: DNA:SNP:CDS:rs2250889 (human)


    • An association has been curated linking Mmp9 and temporal arteritis in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Rodriguez-Pla A, etal., Arthritis Rheum. 2008 Jun;58(6):1849-53. doi: 10.1002/art.23457.
  • The annotation has been inferred from sequence orthology with MMP9 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 5 additional annotations were made from Rodriguez-Pla A, etal., Arthritis Rheum. 2008 Jun;58(6):1849-53. doi: 10.1002/art.23457.
  • 22 RGD objects have been annotated to temporal arteritis  (DOID:13375)
  • 406 papers in RGD have been used to annotate Mmp9
  • Qualifier: no_association
  • Curation Notes: DNA:SNPs:promoter, CDS:rs17576, rs3918242, rs3918252 (human)


    • An association has been curated linking Mmp9 and temporal arteritis in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Sorbi D, etal., Arthritis Rheum. 1996 Oct;39(10):1747-53.
  • The annotation has been inferred from sequence orthology with MMP9 (Homo sapiens) [(IEP) inferred from expression pattern]
  • 2 additional annotations were made from Sorbi D, etal., Arthritis Rheum. 1996 Oct;39(10):1747-53.
  • 22 RGD objects have been annotated to temporal arteritis  (DOID:13375)
  • 406 papers in RGD have been used to annotate Mmp9
  • Curation Notes: protein:increased expression:serum


    • Go Back to source page   Continue to Ontology report