Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

GENE - TERM ANNOTATION REPORT

4 Annotations Found.

An association has been curated linking Shh and holoprosencephaly 3 in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from OMIM Disease Annotation Pipeline
  • The annotation has been inferred from sequence orthology with SHH (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 15 RGD objects have been annotated to holoprosencephaly 3  (DOID:0110875)
  • 93 papers in RGD have been used to annotate Shh


  • An association has been curated linking Shh and holoprosencephaly 3 in Rattus norvegicus.        

  • The association was inferred from sequence or structural similarity (ISS)
  •  
  • The annotation was made from RGD automated import pipeline for MGI gene-to-disease annotations
  • The annotation has been inferred from sequence or structural similarity with Shh (Mus musculus) [(IAGP) inferred by association of genotype and phenotype]
  • 15 RGD objects have been annotated to holoprosencephaly 3  (DOID:0110875)
  • 93 papers in RGD have been used to annotate Shh
  • Curation Notes: OMIM:142945


  • An association has been curated linking Shh and holoprosencephaly 3 in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD automated import pipeline for CTD gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with SHH (Homo sapiens) [(EXP) inferred from experiment]
  • 15 RGD objects have been annotated to holoprosencephaly 3  (DOID:0110875)
  • 93 papers in RGD have been used to annotate Shh
  • Curation Notes: CTD Direct Evidence: marker/mechanism


  • An association has been curated linking Shh and holoprosencephaly 3 in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with SHH (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 15 RGD objects have been annotated to holoprosencephaly 3  (DOID:0110875)
  • 93 papers in RGD have been used to annotate Shh
  • Curation Notes: ClinVar Annotator: match by term: Holoprosencephaly 3
  • Original References(s): PMID:10479723 PMID:10556296 PMID:10631160 PMID:10749657 PMID:11471164 PMID:11479728 PMID:11857543 PMID:11919111 PMID:12503095 PMID:12567406 PMID:12709790 PMID:15107988 PMID:15292211 PMID:15942944 PMID:15942952 PMID:16199547 PMID:16254195 PMID:16282375 PMID:18655123 PMID:19057928 PMID:19478089 PMID:19533790 PMID:19561609 PMID:19603532 PMID:19920144 PMID:20157829 PMID:20425842 PMID:21416594 PMID:21940735 PMID:21976454 PMID:22354285 PMID:22683912 PMID:22791840 PMID:22859937 PMID:22897141 PMID:23370340 PMID:23476075 PMID:24033266 PMID:24095820 PMID:25741868 PMID:26467025 PMID:28127823 PMID:28284480 PMID:28492532 PMID:28518168 PMID:28588853 PMID:29205322 PMID:29983323 PMID:29992659 PMID:31334757 PMID:32022405 PMID:32461654 PMID:32677110 PMID:32939873 PMID:8896572 PMID:9302262 PMID:9600232


  • Go Back to source page   Continue to Ontology report