FATTY ACID BETA DEGRADATION PATHWAY (PW:0000738)

View Ontology Report

Description

The degradation of fatty acids represents an essential source of energy; a major route is the mitochondrial beta-oxidation pathway. Before beta-oxidation can proceed, fatty acids need to be 'primed' or activated. The formation of fatty acyl-CoA thioesters is catalyzed by acyl-CoA synthetases in a two-step reaction. There are several acyl-CoA synthetases named after their chain length specificity. Once activated, acyl-CoAs need to reach the mitochondrial matrix where the enzymes of the beta-oxida

Pathway Diagram:

Ariadne Genomics Inc. NADH Hadha 3-ketoacyl-CoA Acaa2 3-hydroxyacyl-CoA Hadh Echs1 FADH2 CoQ e2 e1 Etfdh Etfb Cpt2 Slc25a20 Acs Cpt1 Acad CoQ ---> oxidative phosphorylation pathway carnitine-in carnitine-out acylcarnitine translocated fatty acyl-CoA Hadhb NAD ---> NADH NAD translocated fatty acyl-CoA ---> trans-2-enoyl-CoA fatty acids ---> fatty acyl-CoA 3-ketoacyl-CoA ---> acyl-CoA - 2C 3-hydroxyacyl-CoA <--> trans-2-enoyl-CoA 3-hydroxyacyl-CoA <--> 3-ketoacyl-CoA trans-2-enoyl-CoA fatty acids fatty acyl-CoA ---> acylcarnitine carnitine-out ---> acylcarnitine carnitine-in ---> carnitine-out acylcarnitine ---> carnitine-in acylcarnitine ---> translocated fatty acyl-CoA FADH2 ---> e1 FADH2 ---> e2 e1 ---> CoQ e2 ---> CoQ acetyl-CoA ---> citrate cycle pathway acetyl-CoA ---> ketone bodies metabolic pathway acyl-CoA - 2C ---> translocated fatty acyl-CoA 3-ketoacyl-CoA ---> acetyl-CoA FAD FAD ---> FADH2 fatty acyl-CoA acetyl-CoA acylcarnitine ---> translocated fatty acyl-CoA citrate cycle pathway ketone bodies metabolic pathway acyl-CoA - 2C Etfa oxidative phosphorylation pathway
GO TO:

Genes in Pathway:

  • Rat
  • Mouse
  • Human
  • show annotations for term's descendants
  •     Sort by:
fatty acid beta degradation pathway term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Acaa2 acetyl-CoA acyltransferase 2 GBrowse link IDA 18 71,587,259 71,632,610 RGD:2317624 RGD
G Acad9 acyl-CoA dehydrogenase family, member 9 GBrowse link ISS 2 122,562,974 122,585,953 RGD:2317589 RGD
G Acadl acyl-CoA dehydrogenase, long chain GBrowse link ISS 9 65,613,130 65,651,775 RGD:2317589 RGD
G Acadl acyl-CoA dehydrogenase, long chain GBrowse link IDA 9 65,613,130 65,651,775 RGD:2317678 RGD
G Acadm acyl-CoA dehydrogenase, C-4 to C-12 straight chain GBrowse link ISS 2 251,866,645 251,890,729 RGD:2317589 RGD
G Acadm acyl-CoA dehydrogenase, C-4 to C-12 straight chain GBrowse link IDA 2 251,866,645 251,890,729 RGD:2317678 RGD
G Acads acyl-CoA dehydrogenase, C-2 to C-3 short chain GBrowse link ISS 12 42,765,284 42,774,528 RGD:2317589 RGD
G Acads acyl-CoA dehydrogenase, C-2 to C-3 short chain GBrowse link IDA 12 42,765,284 42,774,528 RGD:2317678 RGD
G Acadvl acyl-CoA dehydrogenase, very long chain GBrowse link IMP 10 56,856,233 56,861,380 RGD:2317683 RGD
G Acadvl acyl-CoA dehydrogenase, very long chain GBrowse link ISS 10 56,856,233 56,861,380 RGD:2317589 RGD
G Acsl1 acyl-CoA synthetase long-chain family member 1 GBrowse link ISS 16 49,036,892 49,081,416 RGD:2317576 RGD
G Acsl3 acyl-CoA synthetase long-chain family member 3 GBrowse link ISS 9 78,083,239 78,106,933 RGD:2317576 RGD
G Acsl4 acyl-CoA synthetase long-chain family member 4 GBrowse link ISS X 36,168,547 36,232,162 RGD:2317576 RGD
G Acsl5 acyl-CoA synthetase long-chain family member 5 GBrowse link ISS 1 261,554,383 261,599,373 RGD:2317576 RGD
G Acsl6 acyl-CoA synthetase long-chain family member 6 GBrowse link ISS 10 39,729,805 39,778,106 RGD:2317576 RGD
G Acsm2a acyl-CoA synthetase medium-chain family member 2A GBrowse link ISS 1 177,830,613 177,869,061 RGD:2317576 RGD
G Acsm3 acyl-CoA synthetase medium-chain family member 3 GBrowse link ISS 1 178,054,386 178,081,751 RGD:2317576 RGD
G Acsm4 acyl-CoA synthetase medium-chain family member 4 GBrowse link ISS 1 177,972,234 177,996,687 RGD:2317576 RGD
G Acss1 acyl-CoA synthetase short-chain family member 1 GBrowse link ISS 3 141,259,016 141,308,871 RGD:2317576 RGD
G Acss2 acyl-CoA synthetase short-chain family member 2 GBrowse link ISS 3 146,013,995 146,057,119 RGD:2317576 RGD
G Cpt1a carnitine palmitoyltransferase 1a, liver GBrowse link TAS 1 205,852,800 205,912,972 RGD:2317584 RGD
G Cpt1b carnitine palmitoyltransferase 1b, muscle GBrowse link ISS 7 127,737,129 127,746,179 RGD:2317584 RGD
G Cpt2 carnitine palmitoyltransferase 2 GBrowse link TAS 5 129,007,685 129,025,501 RGD:2317584 RGD
G Echs1 enoyl CoA hydratase, short chain, 1, mitochondrial GBrowse link IMP 1 199,901,585 199,910,412 RGD:2317616 RGD
G Etfa electron-transfer-flavoprotein, alpha polypeptide GBrowse link ISS 8 59,013,798 59,072,013 RGD:2317589 RGD
G Etfb electron-transfer-flavoprotein, beta polypeptide GBrowse link ISS 1 93,820,124 93,834,288 RGD:2317589 RGD
G Etfdh electron-transferring-flavoprotein dehydrogenase GBrowse link ISS 2 171,008,641 171,030,692 RGD:2317589 RGD
G Hadh hydroxyacyl-CoA dehydrogenase GBrowse link IMP 2 228,698,545 228,751,691 RGD:2302227 RGD
G Hadha hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit GBrowse link ISS 6 26,173,798 26,191,433 RGD:2317625 RGD
G Hadhb hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit GBrowse link ISS 6 26,139,397 26,173,428 RGD:2317625 RGD
G Slc25a20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 GBrowse link ISS 8 113,715,211 113,737,063 RGD:2317584 RGD

Additional Elements in Pathway:

(includes Gene Groups, Small Molecules, Other Pathways..etc.)
Object TypePathway ObjectPathway Object Description
Gene GroupACSacyl-CoA synthetase members
Gene GroupAcadacyl-Coenzyme A dehydrogenase members
Gene GroupCPT 1carnitine palmitoyltransferase system 1 members

Pathway Gene Annotations

Disease Annotations Associated with Genes in the fatty acid beta degradation pathway
Disease TermsGene Symbols
Mental Retardation, X-LinkedAcsl4
Intellectual DisabilityAcsl4
InflammationAcsl6
Fetal Growth RetardationHadha
ObesityAcadvl , Acsl1 , Cpt1a , Hadh
Diabetes Mellitus, Type 2Cpt1a
CardiomegalyAcadl
Carnitine palmitoyl transferase 1A deficiencyCpt1a
Lipid Metabolism, Inborn ErrorsCpt1a , Cpt2 , Slc25a20
HypoglycemiaAcadl , Hadh
Muscular DiseasesCpt2
Maple Syrup Urine DiseaseAcadm
Fatty LiverHadha
Medium chain acyl CoA dehydrogenase deficiencyAcadm
Acute Kidney InjuryHadhb
Pyruvate Dehydrogenase Complex Deficiency DiseaseAcadm , Acadvl
Mitochondrial DiseasesHadhb
Colitis, UlcerativeAcsm3
VLCAD deficiencyAcadvl
Alzheimer DiseaseHadhb
LeukemiaAcsl6
Multiple Acyl Coenzyme A Dehydrogenase DeficiencyEtfa , Etfb , Etfdh
Colorectal NeoplasmsAcads
HypertensionAcsm3
AcidosisHadhb
Short chain Acyl CoA dehydrogenase deficiencyAcads
Insulin ResistanceAcsl1
Glomerulonephritis, IGAAcsm3
Celiac DiseaseAcadl
Diabetes Mellitus, ExperimentalAcsl6 , Hadh
Ocular HypertensionAcsm3
Myocardial InfarctionHadh
RhabdomyolysisHadhb
OverweightAcsm3
Pericardial EffusionHadhb
StarvationAcsl1
Hepatitis C, ChronicCpt1a
LONG-CHAIN 3-HYDROXYACYL-CoA DEHYDROGENASE DEFICIENCYHadha
Trifunctional Protein DeficiencyHadha , Hadhb
Carnitine-Acylcarnitine Translocase DeficiencySlc25a20
Carnitine Palmitoyltransferase II Deficiency, Late-OnsetCpt2
Carnitine Palmitoyltransferase II Deficiency, InfantileCpt2
Carnitine Palmitoyltransferase II Deficiency, Lethal NeonatalCpt2
Mental Retardation, X-Linked 63Acsl4
Acyl-CoA Dehydrogenase Family, Member 9, Deficiency ofAcad9
Pathway Annotations Associated with Genes in the fatty acid beta degradation pathway
Pathway TermsGene Symbols
glycolysis/gluconeogenesis pathwayAcss1 , Acss2
pyruvate metabolic pathwayAcss1 , Acss2
tryptophan metabolic pathwayHadh , Echs1 , Hadha
fatty acid metabolic pathwayAcadl , Acadm , Acadvl , Acsl1 , Cpt1a , Cpt1b , Cpt2 , Hadh , Echs1 , Acsl4 , Acsl5 , Acsl6 , Acsl3 , Acaa2 , Hadha , Hadhb , Acads
propanoate metabolic pathwayAcadm , Echs1 , Acss2 , Acss1 , Hadha
butanoate metabolic pathwayAcsm3 , Hadh , Echs1 , Acads , Acsm4 , Hadha
valine, leucine and isoleucine degradation pathwayAcadm , Hadh , Echs1 , Acaa2 , Hadha , Acads , Hadhb
lysine degradation pathwayHadh , Echs1 , Hadha
beta-alanine metabolic pathwayAcadm , Echs1 , Hadha
glycolysis pathwayAcss1 , Acss2
gluconeogenesis pathwayAcss1 , Acss2
fatty acid beta degradation pathwayAcadl , Acadm , Acadvl , Acsl1 , Cpt1a , Cpt1b , Cpt2 , Acsm3 , Hadh , Echs1 , Acsl4 , Acsl5 , Acsl6 , Acsl3 , Acaa2 , Hadha , Hadhb , Acads , Etfa , Acsm2a , Acsm4 , Acad9 , Etfdh , Etfb , Acss2 , Acss1 , Slc25a20
forkhead class A signaling pathwayAcadm , Acadvl , Cpt1a , Cpt1b , Hadh
fatty acid elongation pathwayHadh , Echs1 , Acaa2 , Hadha , Hadhb
unsaturated fatty acid biosynthetic pathwayHadha
eicosanoid signaling pathway via peroxisome proliferator-activated receptor gammaAcadl , Acadm , Acsl1 , Cpt1a , Cpt1b , Acsl4 , Acsl5 , Acsl6 , Acsl3 , Cpt2

References Associated with the fatty acid beta degradation pathway:

Ontology Path Diagram:

paths to the root

Import into Pathway Studio: