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MITOCHONDRIAL IRON-SULFUR CLUSTER PROTEIN BIOGENESIS PATHWAY (PW:0002635)

View Ontology Report

Description

The small inorganic Fe-S cluster (ISC) cofactor acts as an electron carrier in redox and catalytic reactions, and as a sulfur donor and environmental sensor. The ISC proteins can be found in mitochondria, cytoplasm and nucleus and are involved in energy production, tRNA modification and features of protein translation, DNA metabolism and repair. The steps in the assembly of iron-sulfur (Fe-S) clusters (ISC) and delivery to Fe-S proteins are part of the mitochondrial ISC biogenesis and the connec

Pathway Diagram:

Elsevier Inc. sulfide holo-Iscu Iscu Iba57 Nubpl Nfu1 mitochondrial iron-sulfur cluster export pathway Fe2+ holo-Iscu ---> Glrx5 Fdx1 ---> holo-Iscu Fdx1l ---> holo-Iscu Iscu ---- Nfs1 persulfide ---> sulfide Fe2+ ---> holo-Iscu Fdxr ---> Fdx1 Fdxr ---> Fdx1l holo-Iscu ---- Hspa9 holo-Iscu ---- Hscb Hspa9 Hscb ---- Hspa9 Fdxr Fdx1l Hscb Fdx1 Nfs1 Glrx5 ---- Hspa9 Lyrm4 ---- Nfs1 Lyrm4 Isca2 Isca1 ---- Isca2 Glrx5 Isca1 Glrx5 ---- Isca2 Glrx5 ---- Isca1 Bola3 persulfide
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Genes in Pathway:


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mitochondrial iron-sulfur cluster protein biogenesis pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bola3 bolA family member 3 ISO RGD PMID:25245479 RGD:11554190 NCBI chr 4:115,853,350...115,862,797
Ensembl chr 4:115,853,350...115,862,797
JBrowse link
G Fdx1 ferredoxin 1 ISO RGD PMID:25245479 RGD:11554190 NCBI chr 8:52,268,536...52,287,344
Ensembl chr 8:52,268,536...52,287,414
JBrowse link
G Fdx2 ferredoxin 2 ISO RGD PMID:25245479 RGD:11554190 NCBI chr 8:19,604,916...19,609,832
Ensembl chr 8:19,604,916...19,609,849
JBrowse link
G Fdxr ferredoxin reductase ISO RGD PMID:25245479 RGD:11554190 NCBI chr10:100,507,863...100,516,649
Ensembl chr10:100,507,865...100,516,658
JBrowse link
G Glrx5 glutaredoxin 5 ISO RGD PMID:25245479 RGD:11554190 NCBI chr 6:123,988,461...123,998,545
Ensembl chr 6:123,988,134...123,998,545
JBrowse link
G Hscb HscB mitochondrial iron-sulfur cluster co-chaperone ISO RGD PMID:25245479 RGD:11554190 NCBI chr12:45,821,527...45,831,902
Ensembl chr12:45,821,555...45,831,909
JBrowse link
G Hspa9 heat shock protein family A (Hsp70) member 9 ISO RGD PMID:25245479 RGD:11554190 NCBI chr18:26,536,131...26,554,294
Ensembl chr18:26,535,798...26,554,292
JBrowse link
G Iba57 iron-sulfur cluster assembly factor IBA57 ISO RGD PMID:25245479 RGD:11554190 NCBI chr10:43,942,017...43,950,807
Ensembl chr10:43,942,017...43,950,807
JBrowse link
G Isca1 iron-sulfur cluster assembly 1 ISO RGD PMID:25245479 RGD:11554190 NCBI chr17:4,905,291...4,917,955
Ensembl chr17:4,905,287...4,917,955
JBrowse link
G Isca2 iron-sulfur cluster assembly 2 ISO RGD PMID:25245479 RGD:11554190 NCBI chr 6:104,418,509...104,420,019
Ensembl chr 6:104,418,454...104,420,045
JBrowse link
G Iscu iron-sulfur cluster assembly enzyme ISO RGD PMID:25245479 RGD:11554190 NCBI chr12:42,852,305...42,858,150
Ensembl chr12:42,852,305...42,858,150
JBrowse link
G Lyrm4 LYR motif containing 4 ISO RGD PMID:25245479 RGD:11554190 NCBI chr17:28,746,457...28,861,849
Ensembl chr17:28,746,469...28,861,750
JBrowse link
G Nfs1 NFS1 cysteine desulfurase ISO RGD PMID:25245479 RGD:11554190 NCBI chr 3:144,637,309...144,659,660
Ensembl chr 3:144,637,309...144,659,666
JBrowse link
G Nfu1 NFU1 iron-sulfur cluster scaffold ISO RGD PMID:25245479 RGD:11554190 NCBI chr 4:119,458,981...119,480,162
Ensembl chr 4:119,459,061...119,480,373
JBrowse link
G Nubpl NUBP iron-sulfur cluster assembly factor like ISO RGD PMID:25245479 RGD:11554190 NCBI chr 6:69,559,278...69,781,254
Ensembl chr 6:69,559,291...69,781,253
JBrowse link

Pathway Gene Annotations

Disease Annotations Associated with Genes in the mitochondrial iron-sulfur cluster protein biogenesis pathway
Disease TermsGene Symbols
Alzheimer's diseaseHspa9
Arterial Occlusive DiseasesFdxr
ataxia telangiectasiaFdx1
Auditory NeuropathyFdxr
Auditory Neuropathy and Optic AtrophyFdxr
autoimmune diseaseHspa9
autosomal dominant intellectual developmental disorder 31Hspa9
autosomal dominant sideroblastic anemia 4Hspa9
autosomal recessive pyridoxine-refractory sideroblastic anemia 2Glrx5
autosomal recessive pyridoxine-refractory sideroblastic anemia 3Glrx5
brain ischemiaHspa9
Brain-Lung-Thyroid SyndromeNubpl
Breast Cancer, FamilialHscb
Childhood-Onset Spasticity with HyperglycinemiaGlrx5
Chromosome 11, Partial Trisomy 11qFdx1
clear cell renal cell carcinomaIscu
combined oxidative phosphorylation deficiency 14Lyrm4
combined oxidative phosphorylation deficiency 19Lyrm4
combined oxidative phosphorylation deficiency 52Nfs1
congenital disorder of glycosylation type IIbBola3
Developmental DisabilitiesIsca2
dystoniaBola3
EndotoxemiaHspa9
Episodic Mitochondrial Myopathy with or without Optic Atrophy and Reversible LeukoencephalopathyFdx2
EVEN-PLUS SYNDROMEHspa9
familial adenomatous polyposis 1Hspa9
gastrointestinal stromal tumorIba57
genetic diseaseBola3 , Fdx1 , Fdx2 , Fdxr , Glrx5 , Hscb , Hspa9 , Iba57 , Isca1 , Isca2 , Iscu , Lyrm4 , Nfs1 , Nfu1 , Nubpl
hepatocellular carcinomaHspa9
Hereditary Neoplastic SyndromesHspa9
hereditary spastic paraplegia 74Iba57
hereditary spastic paraplegia 77Lyrm4
human immunodeficiency virus infectious diseaseHspa9
intellectual disabilityFdx1 , Isca2
Methylmalonyl-CoA Epimerase DeficiencyBola3
microcephalyIba57
mitochondrial complex I deficiencyNubpl
mitochondrial metabolism diseaseNubpl
mitochondrial myopathyFdx2
multiple mitochondrial dysfunctions syndromeIba57 , Isca1 , Isca2 , Nfu1
multiple mitochondrial dysfunctions syndrome 1Nfu1
multiple mitochondrial dysfunctions syndrome 2Bola3
multiple mitochondrial dysfunctions syndrome 3Iba57
multiple mitochondrial dysfunctions syndrome 4Isca2
multiple mitochondrial dysfunctions syndrome 5Isca1
Myocardial IschemiaHspa9
myopathyIscu
Myopathy with Lactic Acidosis, HereditaryIscu
Neurodevelopmental DisordersHspa9
nuclear type mitochondrial complex I deficiency 1Nubpl
nuclear type mitochondrial complex I deficiency 21Nubpl
OPTIC ATROPHY-ATAXIA-PERIPHERAL NEUROPATHY-GLOBAL DEVELOPMENTAL DELAY SYNDROMEFdxr
pancreatitisFdx1
paraplegiaIba57
parathyroid carcinomaIba57
Parkinson's diseaseHspa9
ParkinsonismHspa9
perinatal necrotizing enterocolitisHspa9
pre-eclampsiaIscu
renal cell carcinomaHspa9
rheumatoid arthritisHspa9
sideroblastic anemiaGlrx5 , Hspa9
Sideroblastic Anemia 5Hscb
STING-associated vasculopathy with onset in infancyHspa9
uveitisHspa9
vestibular schwannomatosisHscb
Pathway Annotations Associated with Genes in the mitochondrial iron-sulfur cluster protein biogenesis pathway
Phenotype Annotations Associated with Genes in the mitochondrial iron-sulfur cluster protein biogenesis pathway

References Associated with the mitochondrial iron-sulfur cluster protein biogenesis pathway:

Ontology Path Diagram:

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