View Ontology Report


Photoreceptor cells are susceptible to cellular stress - their degeneration and loss is a major cause of blindness. Many genes have identified for the inherited and highly heterogeneous disorders resulting from photoreceptor degeneration. One of the most common form is retinitis pigmentosa (RP) and its patterns of inheritance are varied - some are autosomal dominant (adRP), others are autosomal recessive (arRP), a smaller fraction are X-linked (XLRP) and between 30 to 50% have not yet been class

Pathway Diagram:

Elsevier Inc. phosphatidylcholine light --+> 11-cis-retinal Rdh12 11-cis-retinal ---> all-trans-retinal light 11-cis-retinal NADH NAD+ 11-cis-retinol retinyl ester retinol all-trans-retinal NADP+ NADPH ATP ADP Rbp1 ---- retinol 11-cis-retinal ---- cone opsins cone opsins Rdh8 Rbp1 Rdh10 Rdh5 Rdh11 NAD+ ---> NADH 11-cis-retinol ---> 11-cis-retinal NADPH ---> NADP+ all-trans-retinal ---> retinol Rlbp1 Abca4 Rbp3 Lrat Rpe65 11-cis-retinal ---- Rho visual phototransduction pathway Rho

Genes in Pathway:

show annotations for term's descendants       view all columns
altered retinoid cycle metabolic pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca4 ATP binding cassette subfamily A member 4 JBrowse link 2 225,645,539 225,783,288 RGD:8547536
G Lrat lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase) JBrowse link 2 181,896,304 181,905,366 RGD:8547536
G Rbp3 retinol binding protein 3 JBrowse link 16 10,277,775 10,286,243 RGD:8547536
G Rdh12 retinol dehydrogenase 12 (all-trans/9-cis/11-cis) JBrowse link 6 102,392,828 102,405,750 RGD:8547536
G Rlbp1 retinaldehyde binding protein 1 JBrowse link 1 141,097,789 141,111,375 RGD:8547536
G Rpe65 RPE65, retinoid isomerohydrolase JBrowse link 2 266,141,581 266,169,197 RGD:8547536

Pathway Gene Annotations

Disease Annotations Associated with Genes in the altered retinoid cycle metabolic pathway
Pathway Annotations Associated with Genes in the altered retinoid cycle metabolic pathway

References Associated with the altered retinoid cycle metabolic pathway:

Ontology Path Diagram:

paths to the root

Import into Pathway Studio: