PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: tamoxifen pharmacokinetics pathway
Accession: PW:0000838
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Definition: The pathway of processing - absorption, distribution, metabolism or elimination - of tamoxifen - a SERM anti-estrogen drug. Genetic variations can result in changes in the availability of the drug. For instance, variation in CYP2D6, an important enzyme for the production of a primary drug metabolite, impacts on the available concentration of the drug.
Synonyms: related_synonym: SMP:00606
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Abcb1a
ATP binding cassette subfamily B member 1A
ISO
RGD
PMID:21148080
RGD:5130188
NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
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Cyp1a1
cytochrome P450, family 1, subfamily a, polypeptide 1
ISO
RGD
PMID:12971802
RGD:5129544
NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125
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Cyp1a2
cytochrome P450, family 1, subfamily a, polypeptide 2
ISO
RGD
PMID:12971802
RGD:5129544
NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312
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Cyp2b3
cytochrome P450, family 2, subfamily b, polypeptide 3
ISO
SMPDB
SMP:00606
NCBI chr 1:81,652,762...81,732,153
Ensembl chr 1:81,652,787...81,732,143
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Cyp2c6
cytochrome P450, family 2, subfamily C, polypeptide 6
ISO
RGD
PMID:12971802
RGD:5129544
NCBI chr 1:237,938,521...237,976,238
Ensembl chr 1:237,693,094...238,057,596
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Cyp2c79
cytochrome P450, family 2, subfamily c, polypeptide 79
ISO
RGD
PMID:12971802
RGD:5129544
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Cyp2d4
cytochrome P450, family 2, subfamily d, polypeptide 4
ISO
SMPDB
SMP:00606
NCBI chr 7:113,882,584...113,891,754
Ensembl chr 7:113,881,618...113,891,759
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Cyp3a2
cytochrome P450, family 3, subfamily a, polypeptide 2
IDA
RGD
PMID:12971802
RGD:5129544
NCBI chr12:9,207,978...9,230,064
Ensembl chr12:9,015,383...9,285,008
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Cyp3a23-3a1
cytochrome P450, family 3, subfamily a, polypeptide 23-polypeptide 1
IDA
RGD
PMID:12971802
RGD:5129544
NCBI chr12:9,256,159...9,285,020
Ensembl chr12:9,254,475...9,285,030 Ensembl chr12:9,254,475...9,285,030
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Cyp3a9
cytochrome P450, family 3, subfamily a, polypeptide 9
ISO
SMPDB
SMP:00606
NCBI chr12:16,806,222...16,846,428
Ensembl chr12:16,806,207...16,846,422
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Esr1
estrogen receptor 1
ISO
SMPDB
SMP:00606
NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
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Fmo1
flavin containing dimethylaniline monoxygenase 1
ISO
SMPDB
SMP:00606
NCBI chr13:75,182,184...75,214,439
Ensembl chr13:75,182,176...75,214,647
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Fmo3
flavin containing dimethylaniline monoxygenase 3
ISO
SMPDB
SMP:00606
NCBI chr13:75,309,367...75,334,915
Ensembl chr13:75,309,374...75,328,028
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Sult1a1
sulfotransferase family 1A member 1
ISO
SMPDB
SMP:00606
NCBI chr 1:181,272,022...181,276,750
Ensembl chr 1:181,272,023...181,275,562
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Sult2a1
sulfotransferase family 2A member 1
IDA
RGD
PMID:16099924
RGD:5129555
NCBI chr 1:75,451,178...75,508,113
Ensembl chr 1:74,911,100...75,508,134
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Ugt1a1
UDP glucuronosyltransferase family 1 member A1
ISO
RGD
PMID:19250197
RGD:5129558
NCBI chr 9:88,801,344...88,808,465
Ensembl chr 9:88,713,184...88,808,465
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Ugt1a2
UDP glucuronosyltransferase 1 family, polypeptide A2
ISO
RGD
PMID:19250197
RGD:5129558
NCBI chr 9:88,791,216...88,808,465
Ensembl chr 9:88,713,184...88,808,465
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Ugt1a5
UDP glucuronosyltransferase family 1 member A5
ISO
SMPDB
SMP:00606
NCBI chr 9:88,762,250...88,808,465
Ensembl chr 9:88,713,184...88,808,465
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Ugt1a9
UDP glucuronosyltransferase family 1 member A9
ISO
RGD
PMID:19250197
RGD:5129558
NCBI chr 9:88,696,981...88,808,465
Ensembl chr 9:88,713,184...88,808,465
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Ugt2b7
UDP glucuronosyltransferase family 2 member B7
ISO
RGD
PMID:19250197
RGD:5129558
NCBI chr14:20,896,682...20,919,604
Ensembl chr14:20,896,682...20,919,604
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all