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EXPERIMENTAL CONDITION - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:controlled sodium content drinking water
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Accession:XCO:0000164 term browser browse the term
Definition:A drink made up of water and a specified amount of sodium, i.e. sodium ions, consumed by an organism as part of an experiment. A sodium ion is an atom of sodium, the chemical element with atomic number 11, that has lost one electron, forming a cation with a charge of +1.


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controlled sodium content drinking water term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp106 Blood pressure QTL 106 IDA RGD PMID:12566390 RGD:629620 NCBI chr10:54,324,933...54,332,939 JBrowse link
Q Bp107 Blood pressure QTL 107 IDA RGD PMID:12566390 RGD:629620 NCBI chr 1:125,611,501...170,611,501 JBrowse link
Q Bp132 Blood pressure QTL 132 IDA RGD PMID:10642295 RGD:68910 NCBI chr 2:46,123,260...202,447,032 JBrowse link
Q Bp154 Blood pressure QTL 154 IDA RGD PMID:14623828 RGD:730283 NCBI chr 1:94,642,644...214,537,671 JBrowse link
Q Bp163 Blood pressure QTL 163 IDA RGD PMID:10642295 RGD:68910 NCBI chr 2:66,118,275...202,447,032 JBrowse link
Q Bp164 Blood pressure QTL 164 IDA 1% NaCl in water RGD PMID:11980293 RGD:728179 NCBI chr 2:42,804,607...202,447,032 JBrowse link
Q Bp165 Blood pressure QTL 165 IDA 1% NaCl in water RGD PMID:11980293 RGD:728179 NCBI chr 2:42,804,607...202,447,032 JBrowse link
Q Bp166 Blood pressure QTL 166 IDA 1% NaCl in water RGD PMID:11980293 RGD:728179 NCBI chr 2:136,445,150...202,447,032 JBrowse link
Q Bp28 Blood pressure QTL 28 IDA RGD PMID:8094726 RGD:61050 NCBI chr 1:151,646,613...196,646,613 JBrowse link
Q Bp336 Blood pressure QTL 336 IDA RGD PMID:19126752 RGD:2306880 NCBI chr 2:64,366,971...109,366,971 JBrowse link
Q Bp337 Blood pressure QTL 337 IDA RGD PMID:19126752 RGD:2306880 NCBI chr 2:164,073,756...227,146,641 JBrowse link
Q Bp338 Blood pressure QTL 338 IDA RGD PMID:19126752 RGD:2306880 NCBI chr 4:81,006,124...120,102,625 JBrowse link
Q Bp339 Blood pressure QTL 339 IDA RGD PMID:19126752 RGD:2306880 NCBI chr16:3,380,150...43,025,077 JBrowse link
Q Bp340 Blood pressure QTL 340 IDA RGD PMID:19620519 RGD:2312571 NCBI chr18:1...30,558,703 JBrowse link
Q Bp341 Blood pressure QTL 341 IDA RGD PMID:19620519 RGD:2312571 NCBI chr18:59,330,409...70,263,868 JBrowse link
Q Bp56 Blood pressure QTL 56 IDA 1% NaCl in water RGD PMID:9931114 RGD:69713 NCBI chr  X:57,042,141...65,612,192 JBrowse link
Q Bp64 Blood pressure QTL 64 IDA 1% NaCl in water RGD PMID:9931114 RGD:69713 NCBI chr  X:1,448,129...31,706,553 JBrowse link
Q Bp65 Blood pressure QTL 65 IDA 1% NaCl in water RGD PMID:9931114 RGD:69713 NCBI chr  X:1,447,972...11,374,346 JBrowse link
Q Bp84 Blood pressure QTL 84 IDA RGD PMID:10604486 RGD:619634 NCBI chr 1:123,350,408...181,759,564 JBrowse link
Q Bp85 Blood pressure QTL 85 IDA RGD PMID:10604486 RGD:619634 NCBI chr 3:1...33,278,763 JBrowse link
Q Bp86 Blood pressure QTL 86 IDA RGD PMID:10604486 RGD:619634 NCBI chr 4:57,114,432...91,360,801 JBrowse link
Q Bp87 Blood pressure QTL 87 IDA RGD PMID:10604486 RGD:619634 NCBI chr10:47,369,470...92,369,470 JBrowse link
Q Bp88 Blood pressure QTL 88 IDA RGD PMID:10523340 RGD:619643 NCBI chr 1:156,677,124...176,484,451 JBrowse link
Q Bp89 Blood pressure QTL 89 IDA RGD PMID:10779121 RGD:619635 NCBI chr 1:123,350,581...201,284,552 JBrowse link
Q Bp96 Blood pressure QTL 96 IDA RGD PMID:9449402 RGD:619642 NCBI chr 1:22,340,647...102,268,831 JBrowse link
Q Bp97 Blood pressure QTL 97 IDA RGD PMID:9449402 RGD:619642 NCBI chr 1:106,047,847...151,047,847 JBrowse link
Q Bp98 Blood pressure QTL 98 IDA RGD PMID:9449402 RGD:619642 NCBI chr17:41,354,651...60,463,643 JBrowse link
Q Bw28 Body weight QTL 28 IDA RGD PMID:15252022 RGD:1302889 NCBI chr19:27,530,207...37,947,399 JBrowse link
Q Bw29 Body weight QTL 29 IDA RGD PMID:15252022 RGD:1302889 NCBI chr 1:33,449,848...78,449,848 JBrowse link
Q Foco1 Food consumption QTL 1 IDA RGD PMID:15252022 RGD:1302889 NCBI chr 4:44,463,908...148,090,542 JBrowse link
Q Foco2 Food consumption QTL 2 IDA RGD PMID:15252022 RGD:1302889 NCBI chr 1:33,449,848...78,449,848 JBrowse link
Q Hrtrt17 Heart rate QTL 17 IDA RGD PMID:9286932 RGD:1358133 NCBI chr 3:10,861,912...89,878,372 JBrowse link
Q Rends2 Renal damage susceptibility QTL 2 IDA RGD PMID:12874092 RGD:631854 NCBI chr 1:19,333,571...56,983,283 JBrowse link
Q Rends3 Renal damage susceptibility QTL 3 IDA RGD PMID:12874092 RGD:631854 NCBI chr10:79,813,789...85,160,854 JBrowse link
Q Rends4 Renal damage susceptibility QTL 4 IDA RGD PMID:12874092 RGD:631854 NCBI chr16:1...26,727,669 JBrowse link
Q Strs1 Sensitivity to stroke QTL 1 IDA RGD PMID:8696337 RGD:61093 NCBI chr 1:121,767,634...166,767,634 JBrowse link
Q Strs2 Sensitivity to stroke QTL 2 IDA RGD PMID:8696337 RGD:61093 NCBI chr 5:135,929,696...166,875,058 JBrowse link
Q Strs3 Sensitivity to stroke QTL 3 IDA RGD PMID:8696337 RGD:61093 NCBI chr 4:40,433,388...85,433,388 JBrowse link
Q Strs4 Sensitivity to stroke QTL 4 IDA RGD PMID:23690346 RGD:7411685 NCBI chr 1:78,430,536...123,430,536 JBrowse link
Q Strs5 Sensitivity to stroke QTL 5 IDA RGD PMID:23690346 RGD:7411685 NCBI chr18:49,999,958...65,845,095 JBrowse link
Q Strs6 Sensitivity to stroke QTL 6 IDA RGD PMID:23690346 RGD:7411685 NCBI chr 5:134,972,980...138,113,556 JBrowse link
Q Strs7 Sensitivity to stroke QTL 7 IDA RGD PMID:23690346 RGD:7411685 NCBI chr15:40,289,901...49,308,583 JBrowse link

Related Phenotype Data for Term "controlled sodium content drinking water" (XCO:0000164)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:
Term paths to the root
Path 1
Term Annotations click to browse term
  experimental condition 2376
    solution 45
      ion/salt solution 45
        sodium ion solution 42
          controlled sodium content drinking water 42
            controlled RU28362 content saline drink 0
            controlled deoxycorticosterone content saline drink 0
            controlled sodium chloride content drinking water 0
Path 2
Term Annotations click to browse term
  experimental condition 2376
    chemical 712
      chemical with specified function 517
        solvent 92
          water 92
            controlled content drinking water 92
              controlled sodium content drinking water 42
                controlled RU28362 content saline drink 0
                controlled deoxycorticosterone content saline drink 0
                controlled sodium chloride content drinking water 0
paths to the root