ONTOLOGY REPORT - ANNOTATIONS

Term:Spinal Cord Injuries
go back to main search page
Accession:RDO:0006597 term browser browse the term
Definition:Penetrating and non-penetrating injuries to the spinal cord resulting from traumatic external forces (e.g., WOUNDS, GUNSHOT; WHIPLASH INJURIES; etc.).
Synonyms:exact_synonym: Post Traumatic Myelopathy;   Post-Traumatic Myelopathies;   Spinal Cord Contusion;   Spinal Cord Contusions;   Spinal Cord Injury;   Spinal Cord Laceration;   Spinal Cord Lacerations;   Spinal Cord Transection;   Spinal Cord Transections;   Spinal Cord Trauma;   Spinal Cord Traumas;   Traumatic Myelopathies;   Traumatic Myelopathy
 primary_id: MESH:D013119

  • Rat
  • Mouse
  • Human
  • All
  • show annotations for term's descendants
  •     Sort by:
Spinal Cord Injuries term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Acan aggrecan GBrowse link IEP 1 134,787,341 134,848,992 RGD:2315837 RGD
G Adcyap1 adenylate cyclase activating polypeptide 1 IEP RGD:2325309 RGD
G Adcyap1 adenylate cyclase activating polypeptide 1 IED RGD:2325306 RGD
G Adipoq adiponectin, C1Q and collagen domain containing GBrowse link ISS 11 79,908,291 79,911,065 RGD:5686719 RGD
G Adora1 adenosine A1 receptor GBrowse link IED 13 47,160,292 47,192,804 RGD:5129094 RGD
G Adora1 adenosine A1 receptor GBrowse link IPM 13 47,160,292 47,192,804 RGD:5129096 RGD
G Adora1 adenosine A1 receptor GBrowse link IEP 13 47,160,292 47,192,804 RGD:4890369 RGD
G Adora2a adenosine A2a receptor GBrowse link IEP 20 13,815,719 13,834,131 RGD:4890378 RGD
G Adra1a adrenoceptor alpha 1A GBrowse link IEP 15 46,173,429 46,263,198 RGD:5688371 RGD
G Ager advanced glycosylation end product-specific receptor GBrowse link IEP 20 4,250,613 4,253,540 RGD:2325645 RGD
G Aif1 allograft inflammatory factor 1 GBrowse link IEP 20 3,714,428 3,716,327 RGD:2313037 RGD
G Ankrd1 ankyrin repeat domain 1 GBrowse link IEP 1 240,316,123 240,324,804 RGD:5133279 RGD
G Anxa1 annexin A1 GBrowse link IED 1 223,478,436 223,494,455 RGD:2306891 RGD
G Apex1 APEX nuclease (multifunctional DNA repair enzyme) 1 GBrowse link IEP 15 26,904,124 26,906,224 RGD:2315670 RGD
G Aqp1 aquaporin 1 GBrowse link IEP 4 84,098,346 84,110,524 RGD:2307072 RGD
G Aqp1 aquaporin 1 GBrowse link IEP 4 84,098,346 84,110,524 RGD:5148013 RGD
G Aqp4 aquaporin 4 GBrowse link ISS 18 6,626,313 6,642,766 RGD:5148035 RGD
G Aqp4 aquaporin 4 GBrowse link IEP 18 6,626,313 6,642,766 RGD:5148013 RGD
G Aqp4 aquaporin 4 GBrowse link ISS 18 6,626,313 6,642,766 RGD:5148027 RGD
G Bdnf brain-derived neurotrophic factor IEP RGD:4891066 RGD
G Bdnf brain-derived neurotrophic factor ISS RGD:4891112 RGD
G Becn1 beclin 1, autophagy related GBrowse link ISS 10 90,317,957 90,333,329 RGD:6483100 RGD
G C1qb complement component 1, q subcomponent, B chain GBrowse link IEP 5 155,647,524 155,653,074 RGD:1599510 RGD
G Casp1 caspase 1 GBrowse link IED 8 2,027,976 2,036,872 RGD:2315889 RGD
G Casp12 caspase 12 GBrowse link IEP 8 2,082,933 2,110,511 RGD:2311450 RGD
G Casp3 caspase 3 GBrowse link IPM 16 48,944,226 48,962,420 RGD:2293322 RGD
G Cav1 caveolin 1, caveolae protein GBrowse link IEP 4 42,956,102 42,989,057 RGD:2289124 RGD
G Ccl5 chemokine (C-C motif) ligand 5 GBrowse link ISS 10 71,605,791 71,610,330 RGD:4889905 RGD
G Ccnd3 cyclin D3 IEP RGD:2316019 RGD
G Ccne1 cyclin E1 GBrowse link IEP 1 90,568,189 90,577,426 RGD:2289281 RGD
G Ccr1 chemokine (C-C motif) receptor 1 GBrowse link IEP 8 128,693,658 128,699,213 RGD:5688138 RGD
G Ccr2 chemokine (C-C motif) receptor 2 GBrowse link IEP 8 128,892,784 128,893,905 RGD:4144888 RGD
G Cdc42 cell division cycle 42 (GTP binding protein) GBrowse link IEP 5 156,106,123 156,143,040 RGD:5688276 RGD
G Cdk1 cyclin-dependent kinase 1 GBrowse link IEP 20 20,018,044 20,044,030 RGD:2316488 RGD
G Cdkn1b cyclin-dependent kinase inhibitor 1B GBrowse link IED 4 171,841,705 171,846,506 RGD:2293615 RGD
G Chl1 cell adhesion molecule with homology to L1CAM IEP RGD:6483045 RGD
G Cnr1 cannabinoid receptor 1 (brain) GBrowse link IEP 5 50,427,173 50,445,471 RGD:2316199 RGD
G Cnr2 cannabinoid receptor 2 (macrophage) GBrowse link IEP 5 154,674,754 154,702,552 RGD:2316199 RGD
G Crh corticotropin releasing hormone GBrowse link IEP 2 104,764,023 104,765,887 RGD:5490964 RGD
G Crp C-reactive protein, pentraxin-related GBrowse link IED 13 88,702,243 88,703,153 RGD:6903321 RGD
G Cspg4 chondroitin sulfate proteoglycan 4 GBrowse link ISS 8 60,610,835 60,645,877 RGD:5686844 RGD
G Cspg4 chondroitin sulfate proteoglycan 4 GBrowse link IED 8 60,610,835 60,645,877 RGD:5686848 RGD
G Cspg4 chondroitin sulfate proteoglycan 4 GBrowse link ISS 8 60,610,835 60,645,877 RGD:5686859 RGD
G Ctss cathepsin S GBrowse link IEP 2 190,425,290 190,466,877 RGD:2303423 RGD
G Cxcl1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) GBrowse link IEP 14 18,690,339 18,692,118 RGD:5135274 RGD
G Cxcl10 chemokine (C-X-C motif) ligand 10 GBrowse link IEP 14 17,265,986 17,268,183 RGD:2311365 RGD
G Cyba cytochrome b-245, alpha polypeptide GBrowse link IEP 19 52,713,150 52,721,609 RGD:1599510 RGD
G Dab2 disabled 2, mitogen-responsive phosphoprotein GBrowse link IEP 2 55,714,874 55,736,370 RGD:7243246 RGD
G Dcc deleted in colorectal carcinoma GBrowse link IEP 18 68,026,795 69,140,741 RGD:2314373 RGD
G Egfr epidermal growth factor receptor GBrowse link IPM 14 97,617,358 97,788,211 RGD:5131525 RGD
G Egfr epidermal growth factor receptor GBrowse link IEP 14 97,617,358 97,788,211 RGD:5131454 RGD
G Eno2 enolase 2, gamma, neuronal GBrowse link IEP 4 160,891,003 160,897,723 RGD:2293743 RGD
G Ensa endosulfine alpha IEP RGD:2303423 RGD
G Epha3 Eph receptor A3 GBrowse link IEP 11 696,185 1,033,287 RGD:2301766 RGD
G Epha4 Eph receptor A4 GBrowse link IPM 9 76,676,778 76,820,752 RGD:5688750 RGD
G Epha4 Eph receptor A4 GBrowse link IEP 9 76,676,778 76,820,752 RGD:5688782 RGD
G Epha4 Eph receptor A4 GBrowse link ISS 9 76,676,778 76,820,752 RGD:5688764 RGD
G Epha7 Eph receptor A7 GBrowse link IPM 5 44,728,037 44,878,332 RGD:2301957 RGD
G Erbb3 v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian) GBrowse link IEP 7 1,858,057 1,877,353 RGD:2289967 RGD
G Fas Fas (TNF receptor superfamily, member 6) GBrowse link IEP 1 238,259,443 238,274,745 RGD:2290177 RGD
G Fas Fas (TNF receptor superfamily, member 6) GBrowse link IED 1 238,259,443 238,274,745 RGD:2290176 RGD
G Fgf1 fibroblast growth factor 1 (acidic) GBrowse link IED 18 31,785,480 31,806,452 RGD:5509876 RGD
G Fgf1 fibroblast growth factor 1 (acidic) GBrowse link ISS 18 31,785,480 31,806,452 RGD:2317692 RGD
G Fgf1 fibroblast growth factor 1 (acidic) GBrowse link IED 18 31,785,480 31,806,452 RGD:5509877 RGD
G Fgf1 fibroblast growth factor 1 (acidic) GBrowse link ISS 18 31,785,480 31,806,452 RGD:5509875 RGD
G Fn1 fibronectin 1 GBrowse link ISS 9 70,702,181 70,771,155 RGD:7205459 RGD
G Gdnf glial cell derived neurotrophic factor GBrowse link ISS 2 57,399,312 57,424,030 RGD:5688774 RGD
G Gfap glial fibrillary acidic protein GBrowse link ISS 10 92,059,881 92,068,555 RGD:6480471 RGD
G Gfap glial fibrillary acidic protein GBrowse link IEP 10 92,059,881 92,068,555 RGD:6480511 RGD
G Grn granulin GBrowse link ISS 10 91,536,135 91,542,239 RGD:5509603 RGD
G Gsta4 glutathione S-transferase alpha 4 GBrowse link IEP 8 83,165,139 83,183,055 RGD:5687769 RGD
G Hif1a hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) GBrowse link IEP 6 96,419,024 96,463,891 RGD:5148013 RGD
G Hrh3 histamine receptor H3 GBrowse link IED 3 169,154,980 169,160,064 RGD:1626425 RGD
G Hspa5 heat shock protein 5 GBrowse link ISS 3 13,783,825 13,788,022 RGD:5685666 RGD
G Il18 interleukin 18 GBrowse link IED 8 53,936,584 53,943,228 RGD:2315889 RGD
G Il1b interleukin 1 beta GBrowse link IEP 3 116,964,422 116,970,867 RGD:1626673 RGD
G Il1b interleukin 1 beta GBrowse link IED 3 116,964,422 116,970,867 RGD:7175523 RGD
G Il1r1 interleukin 1 receptor, type I GBrowse link IEP 9 39,434,910 39,473,552 RGD:7207035 RGD
G Il1rn interleukin 1 receptor antagonist GBrowse link ISS 3 2,607,800 2,613,216 RGD:6907102 RGD
G Il1rn interleukin 1 receptor antagonist GBrowse link IED 3 2,607,800 2,613,216 RGD:1626673 RGD
G Il4 interleukin 4 GBrowse link IPM 10 39,074,582 39,080,134 RGD:5128562 RGD
G Il4r interleukin 4 receptor GBrowse link IEP 1 184,612,903 184,637,863 RGD:5128562 RGD
G Irf1 interferon regulatory factor 1 GBrowse link IEP 10 39,220,600 39,227,602 RGD:2298928 RGD
G Jun jun proto-oncogene GBrowse link IED 5 115,358,166 115,361,259 RGD:4889994 RGD
G Kdr kinase insert domain receptor IEP RGD:5684414 RGD
G Klk6 kallikrein related-peptidase 6 GBrowse link IEP 1 94,254,350 94,261,500 RGD:2314866 RGD
G Lep leptin GBrowse link IEP 4 55,943,837 55,945,938 RGD:5128780 RGD
G Lum lumican GBrowse link IEP 7 35,083,480 35,090,284 RGD:2317692 RGD
G Map1b microtubule-associated protein 1B GBrowse link IEP 2 30,415,235 30,508,354 RGD:2304007 RGD
G Map2 microtubule-associated protein 2 GBrowse link IED 9 65,174,376 65,256,003 RGD:6483323 RGD
G Met met proto-oncogene GBrowse link IEP 4 43,134,183 43,211,355 RGD:2317487 RGD
G Mif macrophage migration inhibitory factor (glycosylation-inhibiting factor) GBrowse link IEP 20 13,191,986 13,192,851 RGD:1641997 RGD
G Mpo myeloperoxidase GBrowse link IEP 10 76,085,872 76,097,012 RGD:6909148 RGD
G Mt-nd3 mitochondrially encoded NADH dehydrogenase 3 GBrowse link IPM MT 9,451 9,798 RGD:5687694 RGD
G Ncf2 neutrophil cytosolic factor 2 GBrowse link IEP 13 67,806,516 67,834,105 RGD:2314450 RGD
G Ngf nerve growth factor (beta polypeptide) GBrowse link IPM 2 197,621,726 197,632,960 RGD:5144073 RGD
G Ngf nerve growth factor (beta polypeptide) GBrowse link IEP 2 197,621,726 197,632,960 RGD:5144069 RGD
G Ngfr nerve growth factor receptor GBrowse link IEP 10 84,262,804 84,281,006 RGD:5144100 RGD
G Nkx6-1 NK6 homeobox 1 GBrowse link IPM 14 9,214,743 9,221,676 RGD:2311166 RGD
G Nos1 nitric oxide synthase 1, neuronal GBrowse link IEP 12 39,812,500 39,869,484 RGD:5132595 RGD
G Nos1 nitric oxide synthase 1, neuronal GBrowse link IPM 12 39,812,500 39,869,484 RGD:5131936 RGD
G Nos2 nitric oxide synthase 2, inducible GBrowse link IEP 10 65,036,884 65,072,453 RGD:4891407 RGD
G Nos3 nitric oxide synthase 3, endothelial cell GBrowse link IEP 4 6,158,847 6,179,441 RGD:4891407 RGD
G Ntf3 neurotrophin 3 GBrowse link ISS 4 162,435,781 162,506,961 RGD:4891112 RGD
G Ntrk1 neurotrophic tyrosine kinase, receptor, type 1 GBrowse link IEP 2 179,838,740 179,855,545 RGD:2308892 RGD
G Ntrk2 neurotrophic tyrosine kinase, receptor, type 2 GBrowse link IED 17 11,494,463 11,811,654 RGD:5684547 RGD
G Ntrk2 neurotrophic tyrosine kinase, receptor, type 2 GBrowse link IPM 17 11,494,463 11,811,654 RGD:5684898 RGD
G Ntrk3 neurotrophic tyrosine kinase, receptor, type 3 GBrowse link IEP 1 133,925,530 134,302,139 RGD:2308892 RGD
G Pdgfb platelet-derived growth factor beta polypeptide GBrowse link ISS 7 118,244,385 118,262,021 RGD:6482306 RGD
G Pla2g2a phospholipase A2, group IIA (platelets, synovial fluid) GBrowse link ISS 5 157,654,786 157,657,360 RGD:6482718 RGD
G Pla2g2a phospholipase A2, group IIA (platelets, synovial fluid) GBrowse link IEP 5 157,654,786 157,657,360 RGD:6482721 RGD
G Pla2g6 phospholipase A2, group VI (cytosolic, calcium-independent) GBrowse link ISS 7 117,266,784 117,307,172 RGD:6482718 RGD
G Plau plasminogen activator, urokinase GBrowse link ISS 15 3,680,072 3,686,232 RGD:6483797 RGD
G Plaur plasminogen activator, urokinase receptor GBrowse link ISS 1 79,708,646 79,712,881 RGD:6483797 RGD
G Ppard peroxisome proliferator-activated receptor delta GBrowse link IEP 20 6,479,108 6,544,255 RGD:2324875 RGD
G Ppargc1a peroxisome proliferator-activated receptor gamma, coactivator 1 alpha GBrowse link IED 14 64,278,115 64,370,912 RGD:6484263 RGD
G Ptgs1 prostaglandin-endoperoxide synthase 1 GBrowse link IEP 3 15,343,832 15,365,412 RGD:5688246 RGD
G Ptgs1 prostaglandin-endoperoxide synthase 1 GBrowse link IPM 3 15,343,832 15,365,412 RGD:5688221 RGD
G Ptgs2 prostaglandin-endoperoxide synthase 2 GBrowse link IEP 13 64,427,288 64,432,978 RGD:5135219 RGD
G Rara retinoic acid receptor, alpha GBrowse link IEP 10 87,740,479 87,753,265 RGD:2314291 RGD
G Rela v-rel reticuloendotheliosis viral oncogene homolog A (avian) GBrowse link IPM 1 208,262,669 208,273,148 RGD:2298849 RGD
G Scn3a sodium channel, voltage-gated, type III, alpha IED RGD:2317321 RGD
G Scn3a sodium channel, voltage-gated, type III, alpha IED RGD:2317320 RGD
G Serpinc1 serpin peptidase inhibitor, clade C (antithrombin), member 1 GBrowse link Resistance IED 13 76,548,456 76,562,724 RGD:1599333 RGD
G Slc25a27 solute carrier family 25, member 27 GBrowse link ISS 9 13,002,823 13,028,534 RGD:6482843 RGD
G Slit1 slit homolog 1 (Drosophila) GBrowse link ISS 1 246,813,909 246,964,408 RGD:2316136 RGD
G Slit2 slit homolog 2 (Drosophila) GBrowse link IEP 14 67,546,283 67,891,840 RGD:2316127 RGD
G Slit3 slit homolog 3 (Drosophila) GBrowse link ISS 10 19,983,166 20,576,689 RGD:2316136 RGD
G Socs2 suppressor of cytokine signaling 2 GBrowse link IEP 7 32,605,714 32,608,323 RGD:2298928 RGD
G Sparc secreted protein, acidic, cysteine-rich (osteonectin) GBrowse link ISS 10 40,809,730 40,831,481 RGD:2300052 RGD
G Spp1 secreted phosphoprotein 1 ISS RGD:6483848 RGD
G Tacr1 tachykinin receptor 1 GBrowse link IPM 4 116,610,595 116,780,394 RGD:2304258 RGD
G Tert telomerase reverse transcriptase GBrowse link ISS 1 30,445,180 30,465,942 RGD:2291993 RGD
G Tgfb1 transforming growth factor, beta 1 GBrowse link IPM 1 80,894,705 80,911,020 RGD:2302103 RGD
G Tgfb2 transforming growth factor, beta 2 GBrowse link IPM 13 102,718,703 102,818,768 RGD:2302103 RGD
G Thbd thrombomodulin GBrowse link ISS 3 137,158,955 137,162,607 RGD:1580060 RGD
G Thbs1 thrombospondin 1 IEP RGD:2317939 RGD
G Tnc tenascin C IEP RGD:4889619 RGD
G Tnf tumor necrosis factor GBrowse link IPM 20 3,661,000 3,663,618 RGD:5131936 RGD
G Tnfrsf1a tumor necrosis factor receptor superfamily, member 1a GBrowse link IEP 4 162,172,563 162,185,252 RGD:1624185 RGD
G Vegfa vascular endothelial growth factor A GBrowse link IEP 9 10,520,730 10,536,071 RGD:5148013 RGD
G Vhl von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase GBrowse link IED 4 149,529,396 149,536,289 RGD:2325181 RGD
G Vim vimentin GBrowse link ISS 17 87,847,280 87,855,763 RGD:6480471 RGD
G Vim vimentin GBrowse link IEP 17 87,847,280 87,855,763 RGD:6480511 RGD
G Xylt1 xylosyltransferase 1 GBrowse link IPM 1 175,673,299 175,802,134 RGD:2313145 RGD
Spinal Cord Compression term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Egr1 early growth response 1 GBrowse link IEP 18 27,343,919 27,346,117 RGD:5131876 RGD
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) GBrowse link IEP 2 51,737,090 51,754,583 RGD:2326108 RGD
G Hspa4 heat shock protein 4 GBrowse link ISS 10 38,705,629 38,749,058 RGD:6218959 RGD
G L1cam L1 cell adhesion molecule GBrowse link ISS X 159,784,792 159,801,553 RGD:6483029 RGD
G Mt2A metallothionein 2A GBrowse link ISS 19 11,267,811 11,268,585 RGD:6483848 RGD
G Tnfrsf1a tumor necrosis factor receptor superfamily, member 1a GBrowse link IEP 4 162,172,563 162,185,252 RGD:5130917 RGD
G Tnfrsf1b tumor necrosis factor receptor superfamily, member 1b GBrowse link ISS 5 163,666,541 163,697,484 RGD:5130917 RGD
G Tnfrsf1b tumor necrosis factor receptor superfamily, member 1b GBrowse link IEP 5 163,666,541 163,697,484 RGD:5130917 RGD
Term paths to the root
Path 1
Term Annotations click to browse term
  Diseases 30477
    Wounds and Injuries 676
      Spinal Cord Injuries 152
        Autonomic Dysreflexia 0
        Central Cord Syndrome 0
        Spinal Cord Compression 8
Path 2
Term Annotations click to browse term
  Diseases 30477
    Nervous System Diseases 5233
      Central Nervous System Diseases 3421
        Spinal Cord Diseases 353
          Spinal Cord Injuries 152
            Autonomic Dysreflexia 0
            Central Cord Syndrome 0
            Spinal Cord Compression 8
paths to the root

Contact Us |  About Us |  Jobs at RGD